MELO3C008497 (gene) Melon (DHL92) v4

Overview
NameMELO3C008497
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 8818436 .. 8819054 (+)
RNA-Seq ExpressionMELO3C008497
SyntenyMELO3C008497
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCCACGAACCTTCAAACAGCCACTGCCCATTTCACCAGCTTGTATAGCCCGACCCATTTTGCCTCAGATTCTGAAACTTACCTTACTAGCCCAAATCCTGATTTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCTACTGAAGCCCATCAACTCCTTTTGATTCTTCCACCTATTCCCAAAGATCTTAATCGGTTGGTTCATAGCTCTCCAACTCCACTAACGTCAACTTCCTCGCAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTTAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAGTATTATGGTTGTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACGTGCTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATTATGGTGATCAATGAAAGTTATCTCTTGGAATGTTTGCGAACTTAATTCCTGGAGAAAACGAGCCTTGGTTAAATAGTTGATTCAACTTTACAACCCTAATTTTGTTCTTTTGCAGGAAACCAAGTTATCTAG

mRNA sequence

ATGGGCCCACGAACCTTCAAACAGCCACTGCCCATTTCACCAGCTTGTATAGCCCGACCCATTTTGCCTCAGATTCTGAAACTTACCTTACTAGCCCAAATCCTGATTTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCTACTGAAGCCCATCAACTCCTTTTGATTCTTCCACCTATTCCCAAAGATCTTAATCGGTTGGTTCATAGCTCTCCAACTCCACTAACGTCAACTTCCTCGCAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTTAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAGTATTATGGTTGTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACGTGCTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATTATGGAAACCAAGTTATCTAG

Coding sequence (CDS)

ATGGGCCCACGAACCTTCAAACAGCCACTGCCCATTTCACCAGCTTGTATAGCCCGACCCATTTTGCCTCAGATTCTGAAACTTACCTTACTAGCCCAAATCCTGATTTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCTACTGAAGCCCATCAACTCCTTTTGATTCTTCCACCTATTCCCAAAGATCTTAATCGGTTGGTTCATAGCTCTCCAACTCCACTAACGTCAACTTCCTCGCAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTTAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAGTATTATGGTTGTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACGTGCTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATTATGGAAACCAAGTTATCTAG

Protein sequence

MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLILPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYGNQVI
Homology
BLAST of MELO3C008497 vs. NCBI nr
Match: KAA0050510.1 (hypothetical protein E6C27_scaffold175G001530 [Cucumis melo var. makuwa])

HSP 1 Score: 323.9 bits (829), Expect = 8.0e-85
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0

Query: 1   MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLI 60
           MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLI
Sbjct: 7   MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLI 66

Query: 61  LPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFP 120
           LPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFP
Sbjct: 67  LPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFP 126

Query: 121 GQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYGNQ 167
           GQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYG+Q
Sbjct: 127 GQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYGDQ 172

BLAST of MELO3C008497 vs. NCBI nr
Match: TYK05133.1 (hypothetical protein E5676_scaffold1769G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-09
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0

Query: 37  FETQSLDVAIFGEDPTEAHQLLLILPPIPKDLNRLVHSSPTPLTSTSSQTINVPH-PPAN 96
           F T SL+ A+FGE+P+E+   + ILPP+P D +  +     P+ S    T ++P    A 
Sbjct: 48  FATHSLENAVFGENPSESDLPITILPPVPTDFHSPMQH---PIPSKQPSTSDIPSTSTAT 107

Query: 97  SLNLQGLPQSLLHMDLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKSAT 156
            ++L+ +   LL   L +      P  K K+  +  ++R KLQRELQNL  SI YDKS  
Sbjct: 108 PISLRDIASILLQHGLCVMAIPSLPPPKLKKPYTANTERNKLQRELQNLQSSICYDKSLA 167

Query: 157 LAISEG 162
           LA  EG
Sbjct: 168 LANREG 170

BLAST of MELO3C008497 vs. ExPASy TrEMBL
Match: A0A5A7U5M3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001530 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.9e-85
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0

Query: 1   MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLI 60
           MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLI
Sbjct: 7   MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLI 66

Query: 61  LPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFP 120
           LPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFP
Sbjct: 67  LPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFP 126

Query: 121 GQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYGNQ 167
           GQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYG+Q
Sbjct: 127 GQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYGDQ 172

BLAST of MELO3C008497 vs. ExPASy TrEMBL
Match: A0A5D3BZG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00370 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0

Query: 37  FETQSLDVAIFGEDPTEAHQLLLILPPIPKDLNRLVHSSPTPLTSTSSQTINVPH-PPAN 96
           F T SL+ A+FGE+P+E+   + ILPP+P D +  +     P+ S    T ++P    A 
Sbjct: 48  FATHSLENAVFGENPSESDLPITILPPVPTDFHSPMQH---PIPSKQPSTSDIPSTSTAT 107

Query: 97  SLNLQGLPQSLLHMDLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKSAT 156
            ++L+ +   LL   L +      P  K K+  +  ++R KLQRELQNL  SI YDKS  
Sbjct: 108 PISLRDIASILLQHGLCVMAIPSLPPPKLKKPYTANTERNKLQRELQNLQSSICYDKSLA 167

Query: 157 LAISEG 162
           LA  EG
Sbjct: 168 LANREG 170

BLAST of MELO3C008497 vs. ExPASy TrEMBL
Match: A0A0A0LW63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181550 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.1e-06
Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 58  LLILPPIPKDLNRLVHSS--------PTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHM 117
           L ILPPI +DL   +H+S        P P   T+S    +P P   SL        L   
Sbjct: 45  LAILPPISEDLTHPIHTSSEHQQSLHPNPNNQTASTQPIIPLPDLASL--------LAQH 104

Query: 118 DLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKS 154
            L  W F LF  QK  +  ST  KR K+QRELQNLH SI+YDKS
Sbjct: 105 GLCTWAFPLFLLQKLLKDLSTTIKRNKMQRELQNLHSSIHYDKS 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050510.18.0e-8599.40hypothetical protein E6C27_scaffold175G001530 [Cucumis melo var. makuwa][more]
TYK05133.12.5e-0938.10hypothetical protein E5676_scaffold1769G00370 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U5M33.9e-8599.40Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BZG41.2e-0938.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LW636.1e-0643.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008497.1MELO3C008497.1mRNA