MELO3C008483 (gene) Melon (DHL92) v4

Overview
NameMELO3C008483
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionVesicle transport protein
Locationchr06: 8542794 .. 8548226 (-)
RNA-Seq ExpressionMELO3C008483
SyntenyMELO3C008483
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATTAATCAAATTGGAAAAAAGATCCAAAAGAAAATGAAATTAGCCTTTGAAGAAAACAAAGTTGCATTTTATAGGGGATTTTAGTAGTTTGTGGACGATCAATCACGATTCCACGAGTCGACACAAGACAACGTGAGCTGAACCCCGACCCTGAATTTCTTTCAAAATGTGGAAGCTCAGCGATGGTGTATTTGTCGATGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCTCTAACTCCTGTACAGGTACTTTAACCAACGATCATACAGTCTCCCCTTATGCAAATTTTCATGGGTTTTGCTCACTTTTCTTTCTTCTTCTTCTTCTTTCTGAACAGAGGCTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGGTATGGACATTTGACCCATTTCCACGTTTAACCCAATTTCACTTGCTTCTAATGTTTTGTGCATCTTTTATTTGTGGGGAATTTTGATGATAATATTGGGTTTGGGCCTCAAGTTAAGCTCTGGGTATGACTGGTAACTTGGGTTTTCTCTGTATCCATTGCTTATTTTGGGATTTAATAAGATGCATATTCTGTAACTATCCACTGGTTGGACTTGGCTCTTGAGGCTTGAAGTGTAAATTGAAAAACACCACAAAGAAGGAAGGTGGAATTGAATTTGGATGGGAAGCTAAGGAATTTCCTCTAAGAACTAAAATGGGGGTAGTGAAGAAAAATTAAGTTGCTTGGTCAATTGGGAGATTTTCTACCAATTGAAAATGGAGGGCTCTTGATGGGGATTTAAGGAAGAAAAATGCACCTCAGTTATCAATTTGATATGGAGACTTTTTACTGAATATGATGAAATGTTGTAATGGGATTTTATCCGTTAGTTATGGGAGAGTACTTAGGATCTTTTACACGTAAGAAGGGTTGGATGCTACTGCCTTCAATTGGTATCATAGTCATTATCTAAACCTAGCTGTGTGGGTGAGATCCTTAGCGATTTCGAATGAAAGTAGTGAATCTCATAGACGAATCCCCAAATCAGACAATACTTGGAGCAACAAGCAAGTAATAACTCTATCAAACTCACTGGTAGAGAAGTAGATCTTTGCTTGAGGGGAAGAGATCATGGGAGCATATTGGTTAGGGAATGAAGTGAAAAATGATCGTGAGTATATAAGTGTAGACGATTATCTTCATTTAAATGAGACATTTTGGGCGATACCAAAAGTAAAACCACGAAGGTTTATGCCAAAATGGACAATATCATACCATTGCAGAGATTGTTGGAGGTTTCATTGTCCTTTTCAAAGTGAAGCTTGAGAGCATGTCCTTGGAGTTTGAACATGACATCCACAACGAGCTCAACTGAACCAGAAATGGGCAGTGAGCATTAAGCAAGGAGCTGTCTACAGCAATCCGGAAGGAAAGAAGCCATAAAGAAGTCAACTTCTCAGTGTAGGCATTATGACATGAGGGTGAAAATTAGGCTGTGGGGAGGGGACTCAAAGGAGAAATTTTGGTTTTAAAATCCAGTTAGTTTGTTTATTGTTGCAAAGAAGAAAAGAAACATGATCACCTGTCTTTTCACTGTTATTAAACTGTAAGCTGTATTGCGAATCTCGACTCATTAAATGCAGTGCACTTAGGCTCTTGTCAAGTCAGTCAAAGACAAGAAGTATTGTTCCATTGTTATCAGCCCGCAGACTATAGAAAAAAGATAAAATCATATGGATTAATGCAGTAAAAGAAATATCATGGGGTACTAGTGAATACAGGATTCACAAGCTAAAATTTTCTTCATTATTGAATTATCATAATCAGTAAACAATGAGACTAAGCAAGAGTTGAAGTTAATTGTCAATATATTGCAGGCGATTGACTCTACTAGATTGGGGGATGGAGGTACAAAGCTTATTGGTCCCTCAAAAAGCCTGGACTGTTTTCTTTCTGCTCAGCCTTTATTAAATTAACCAGAATCAGTCAAAAACTTAAAAGCCCCTATAATTATGCTGATTTGGAAGTTTAATGTTCCAAAGAAGAAGATAAGAGTTTTCCTCTGGAATCTTGGCCATAAAATAGTGAATGCTCAAGAAAGCTTAGGAACCACAGCATTAATCCTTCAGTCTGTTTTTCGTGCTTAAAAGGAGAAGAAAACATTGAGCTTCTTTCCCTTTGAGGGGATGGGAACAGCTTCCTAAGAATTTTGGTTTATGCTCTTGTTTACCTGAGAAGATGGGGATTGGCTTATTGAAGCCTTGAATGGGGGTAGAGTCTAAAGGAAGGATGAAATTTTTTTGGAGATGTGTCACGGTGTGCTTGTGTGGGAGGTTTGATGTGAAGTCATAAACACAAGGATTCTTTTTACAGCATCACTGCAAAGAAATCCTCCAAATTTGGGAGGCTGGGTTAGTTGTCAATTTTGACGGGCTCCTTACCCCTCTGCTCCTGGGCTGTGTTTTTGTTTTGTGATGAATGCGTATGAGTTTTGAGTAATATTTATACACACGCGCACACTTTGCAGGCTAATTTTTGTGTAGTAGTGTTGTGCTCTTTCACCTTTAGTATCAATTGATGATTTTGTTCATTGCTTCTCCTTTTCTTTTCTTGATTGGTGACTTTTTTAAATCTCCATGTTCTTCTGTCTTTTAAGTTCCATTTGGATTTCTATGATTCTAGATCGACATAGCCCAGCTTCGTTGATTTCAGTTTTGCTCATTATCTGAACCCGTGCTTATTAAGTGAGAAATTTGATCCATTTGCTACATTTTCTTCTTCTTGCAGTCATTACTTGTTTTTGCTAAGCCTCTCAAATTTGCTGTACTTTTTACATTTGGCAATGTTTTGGCAGTTGGAAGGTATAACCATTTAAATTAGAAAGCTGTTGTTTTCGTTACATTCTACCTATATCAGCAGTTGAGAAGTATTATTTGGAGGAGCACTTTTGTTCTCTTTCACTGCATTCTCGCTTGCATTTAATACTTCTTGTAATTTTCTATCTCATGTATTTCTTTCAAGAAGAAGTTCTTTTTTTTTTTTCAAACAACAGGAAGAAAATCGTGGGGGAAAACTTTTTATGTATCACTGTGTTGTTCCTTTTCCTTGAGGTATTAATATTTCAAATTGCATCTTATTTGGCAGCACAGCTTTCCTCTTTGGACCCGGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTTTTGCGACAGCTATTTACCTGGGATGCGTTGTTCTAGCTCTTATATGTGCTCTCTGGGTAAGTCACTATTCTGACTATATGACATTATATGAGAAAACGGACTTAAATTACTTATGCATTAAGATATTCAATAAACAATCTTCAATTAATCTGTGGAACACAATACTAATAGCATTTGTATTAGGTTCCTCTTCAGCTATTCCACAAGGTTCCCAAATACGGTTTTGCATTTTTTTCTTTAACAAATAAAGCATGTAATGTATCAAAATGTTGTATCGACCTAGGATGGACTTGTGCAAACAGTTATTGTCTCATATTGTCTTTTAACTGAGTTTCCTTGCTATTCATTTTTCATTTTTCAGATCCACAATAAAATCTTGACAGTGTTTGCAATGATAAGCGAGATATGTGCTCTAATATGGTACGTTTACTTTTATCAATCATTCAATTGCCATCGTCCACTCAATTCAAGTTCCATTTAAAACTAGAGAATGAAAAGACATTTCCAGTCGATGAAAATGTGTCCAGTCTTATCTTGCGAGACTCTTCTTGCATCTAAACTAGATTAACCATAACTTTCTTGGTTTATCATGTTCCAGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTCAATTGATGGTCCGATTTTGTGACACGGAACTATAGACAATGAAACATGCGATAATGATCGATGATTCAGTGTCTTCAAGATCTGAGATTGTTTCTTGTCTTAGTTGTTTTTTACATTTCAGTGAGCACAAGACCAGTTGGAGATTTGTTTTTTTCTTGTTTTTTTGGTCGAAGTTGAGTTTGTCTACATAAATGTATAATCCAAAAGCCAGTTCAATGCTTGTGCTAATTTTTTAAATATAATAACATTCTTTTCAAAATATTACCTTAGATACCTCTCTCTCTTTATATCTCAATGGGGAAGCGTATTTTCCAGGTAAAACAAAGTCTGAACGTTTAGAATGGAAGTATGAAGCCCAATCATCATGCAATAAGCTTTCATCGTATTATCTGTTGAAGCCCATTAAACCTCAGATCCAAAATCAACAAAAGTGAGCAATTCTCCAGGTTAGCAACAATATCCACTTTCTCTATCTATTTGTTTTAACCGTTTACTTGAAATTTTCTGCATTGCTCCGTGTTAAACCACCACTAAATACTAAATTCAAAAGGCTCAAGTTGCTAGGCAAGAGTATGCTTGTTTTTTATACACATTCTTAACATTCAAAACCAAAGACTCAACCAACCATCAAAGGAGTAAGTAAAGGAAAAAACAGAGGTAGAAATAAACAGCCTTGTTACAAAGCTTGGCTTTCGTTTCATGAATTTCTTGTCATCTAAACGAGTTGATTTCTAAAGTTTAAGAGTTAAACTTTGGAGTTAAAAGAAGATTATATTTAGAGTGTAGAGTTGTAATTGTGAAGATGAAATTTTTCGATATTTGTAAACTTCAATAGTAAAAACACTATTGAAATTAGTGGAGTTGAGAAGTAGATGTGTCAAACACTCCCTATTTTGGGTTAACTGATGGGCTGCAAGCCCATAAAAATGAACAGGAAAAGAACTCAAACCAGAGCTCCTGTCTATATTTTAATGGCAACTTGTCAGTTAGGTTCTGAAAGTGAAATCCAGATATATCATGCTTAGGGTGCATTCTTATGACTGTTATGACCGGAGAATTTATAAAATATTTGTATATGACACAAACCTTACATCATAACACCATGTGGAAAACTTTTCCACCTACCTCAATGGTCTCCTCCCACCTACCCATGTGGGGGATTTGCCTTCTTCAACTGCCAAACCTTTCGCTTCCAAGTTGATGAAACTATCTTTTTTCTTAAATTATTGGCATAATTCATAAACTCATCACATTCAAGGCAACACATGTCTGCTCCACTACGCATATGGCCATGTTACACATTCATTTTACCATAATGCCCCCCAACCCCCTTTCTCTGATAATGATGGTGGCTCCATACTTTAACCTTTTGTGAAGCTTGTTCTGTAGGAAATCTGATTGTGTCTTTTGAATCTTTTGGACTATATGAAACTTCTGCGAGGTTGGGGAAGGAGTATGGGCATGGGAATCCATTGTTTTGACCTGTGATTACAAAAAAGTTGGATTCTTTTTTGTATTTTGACAGAAAGTCCCCCATTATAGTAATGGTTGGGCTAACTGCTAA

mRNA sequence

ATGCAAATTAATCAAATTGGAAAAAAGATCCAAAAGAAAATGAAATTAGCCTTTGAAGAAAACAAAGTTGCATTTTATAGGGGATTTTAGTAGTTTGTGGACGATCAATCACGATTCCACGAGTCGACACAAGACAACGTGAGCTGAACCCCGACCCTGAATTTCTTTCAAAATGTGGAAGCTCAGCGATGGTGTATTTGTCGATGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCTCTAACTCCTGTACAGAGGCTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGGTATGGACATTTGACCCATTTCCACGGTTGGATGCTACTGCCTTCAATTGGTATCATAGTCATTATCTAAACCTAGCTGTGTGGGTGAGATCCTTAGCGATTTCGAATGAAAGTAGTGAATCTCATAGACGAATCCCCAAATCAGACAATACTTGGAGCAACAAGCAAGCGATTGACTCTACTAGATTGGGGGATGGAGCATCACTGCAAAGAAATCCTCCAAATTTGGGAGGCTGGTCATTACTTGTTTTTGCTAAGCCTCTCAAATTTGCTGTACTTTTTACATTTGGCAATGTTTTGGCAGTTGGAAGCACAGCTTTCCTCTTTGGACCCGGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTTTTGCGACAGCTATTTACCTGGGATGCGTTGTTCTAGCTCTTATATGTGCTCTCTGGATCCACAATAAAATCTTGACAGTGTTTGCAATGATAAGCGAGATATGTGCTCTAATATGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGATACCTCTCTCTCTTTATATCTCAATGGGGAAGCGTATTTTCCAGAAAGTCCCCCATTATAGTAATGGTTGGGCTAACTGCTAA

Coding sequence (CDS)

ATGTGGAAGCTCAGCGATGGTGTATTTGTCGATGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCTCTAACTCCTGTACAGAGGCTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGGTATGGACATTTGACCCATTTCCACGGTTGGATGCTACTGCCTTCAATTGGTATCATAGTCATTATCTAAACCTAGCTGTGTGGGTGAGATCCTTAGCGATTTCGAATGAAAGTAGTGAATCTCATAGACGAATCCCCAAATCAGACAATACTTGGAGCAACAAGCAAGCGATTGACTCTACTAGATTGGGGGATGGAGCATCACTGCAAAGAAATCCTCCAAATTTGGGAGGCTGGTCATTACTTGTTTTTGCTAAGCCTCTCAAATTTGCTGTACTTTTTACATTTGGCAATGTTTTGGCAGTTGGAAGCACAGCTTTCCTCTTTGGACCCGGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTTTTGCGACAGCTATTTACCTGGGATGCGTTGTTCTAGCTCTTATATGTGCTCTCTGGATCCACAATAAAATCTTGACAGTGTTTGCAATGATAAGCGAGATATGTGCTCTAATATGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGATACCTCTCTCTCTTTATATCTCAATGGGGAAGCGTATTTTCCAGAAAGTCCCCCATTATAGTAATGGTTGGGCTAACTGCTAA

Protein sequence

MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFPRLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGASLQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMIPLSLYISMGKRIFQKVPHYSNGWANC
Homology
[Close]
BLAST of MELO3C008483 vs. NCBI nr
Match: XP_008441622.1 (PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-64
Identity = 148/228 (64.91%), Postives = 149/228 (65.35%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMIL        
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMIL-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA
Sbjct: 121 -----------SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. NCBI nr
Match: XP_022141324.1 (vesicle transport protein SFT2B isoform X2 [Momordica charantia])

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-62
Identity = 142/228 (62.28%), Postives = 150/228 (65.79%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLS GVF DDEER QSLLDEDSEDLCSL+PVQRLY FG CLTGGVVCM+L        
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVLA------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                    Y SHY                                              
Sbjct: 61  --ICLVLMSYTSHY---------------------------------------------- 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
               P +   +SLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRI+ATA
Sbjct: 121 ----PASTDDFSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATA 169

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMV 169

[Close]
BLAST of MELO3C008483 vs. NCBI nr
Match: XP_038880533.1 (vesicle transport protein SFT2B [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 4.2e-61
Identity = 142/228 (62.28%), Postives = 144/228 (63.16%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLS GVFVDDEE  QSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMIL        
Sbjct: 1   MWKLSRGVFVDDEEHGQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMIL-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRI+ATA
Sbjct: 121 -----------SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVL LICALWIHNKILTV AMISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLGLICALWIHNKILTVIAMISEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. NCBI nr
Match: XP_022141325.1 (vesicle transport protein SFT2B isoform X3 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 6.7e-59
Identity = 137/228 (60.09%), Postives = 143/228 (62.72%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLS GVF DDEER QSLLDEDSEDLCSL+PVQRLY FG CLTGGVVCM+L        
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVL-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRI+ATA
Sbjct: 121 -----------SLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. NCBI nr
Match: XP_022945270.1 (vesicle transport protein SFT2B [Cucurbita moschata] >XP_022968626.1 vesicle transport protein SFT2B [Cucurbita maxima] >KAG6574237.1 Vesicle transport protein SFT2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013303.1 Vesicle transport protein SFT2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-56
Identity = 135/228 (59.21%), Postives = 140/228 (61.40%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKL  GVF DDEER QSLLDEDSEDLCSLTPVQRLY FGGCLTGGVVCMI+        
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKP+KFA LFTFGNVLAVGSTAFLFGPGQQ+RMMFDSVRI+ATA
Sbjct: 121 -----------SLLVFAKPIKFAALFTFGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICAL IHNKILTV AM SEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALLIHNKILTVIAMTSEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. ExPASy Swiss-Prot
Match: O95562 (Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15
Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0 

Query: 142 FAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNKIL 201
           FAV +TFGN+ ++GST FL GP +Q++ MF+  R+ AT + L C  L L  A W HNK L
Sbjct: 65  FAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGL 124

Query: 202 TVFAMISEICALIWYSLSYIPFAR 226
            +   I +  AL WYSLS+IPFAR
Sbjct: 125 ALIFCILQSLALTWYSLSFIPFAR 148

[Close]
BLAST of MELO3C008483 vs. ExPASy Swiss-Prot
Match: Q8WV19 (Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0 

Query: 142 FAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNKIL 201
           FAV +T GN+ A+ ST FL GP +Q++ MF++ R+ AT + L C +  L  ALW H K L
Sbjct: 64  FAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGL 123

Query: 202 TVFAMISEICALIWYSLSYIPFAR 226
            V   I +  ++ WYSLSYIP+AR
Sbjct: 124 AVLFCILQFLSMTWYSLSYIPYAR 147

[Close]
BLAST of MELO3C008483 vs. ExPASy Swiss-Prot
Match: Q5SSN7 (Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-13
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0 

Query: 130 GWSLLVFAKPLK-FAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVL 189
           G  LL     +K FAV +T GN+ A+ ST FL GP +Q++ MF++ R+ AT I L C+V 
Sbjct: 51  GTGLLWLPNGMKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVF 110

Query: 190 ALICALWIHNKILTVFAMISEICALIWYSLSYIPFAR 226
            L  ALW   K L +   I +  ++ WYSLSYIP+AR
Sbjct: 111 TLCAALWWRKKGLALLFCILQFLSMTWYSLSYIPYAR 147

[Close]
BLAST of MELO3C008483 vs. ExPASy Swiss-Prot
Match: Q5U3Y5 (Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0 

Query: 142 FAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNKIL 201
           FAV +T GN+ A+ ST FL GP +Q++ MF++ R+ AT I L C+V  L  ALW   K L
Sbjct: 64  FAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGL 123

Query: 202 TVFAMISEICALIWYSLSYIPFAR 226
            +   I +  ++ WYSLSYIP+AR
Sbjct: 124 ALLFCILQFLSMTWYSLSYIPYAR 147

[Close]
BLAST of MELO3C008483 vs. ExPASy Swiss-Prot
Match: Q8VD57 (Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.4e-13
Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 142 FAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNKIL 201
           FAV +T GN++++GST FL GP +Q++ MF+  R+ AT + L C  L L C+ ++ NK L
Sbjct: 65  FAVFYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLCFALTL-CSAFLWNKGL 124

Query: 202 TVFAMISEICALIWYSLSYIPFAR 226
            +   I +  AL WYSLSYIP+AR
Sbjct: 125 ALIFCILQSLALTWYSLSYIPYAR 147

[Close]
BLAST of MELO3C008483 vs. ExPASy TrEMBL
Match: A0A1S3B3W0 (Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103485702 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 6.7e-65
Identity = 148/228 (64.91%), Postives = 149/228 (65.35%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMIL        
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMIL-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA
Sbjct: 121 -----------SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. ExPASy TrEMBL
Match: A0A6J1CIC0 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 142/228 (62.28%), Postives = 150/228 (65.79%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLS GVF DDEER QSLLDEDSEDLCSL+PVQRLY FG CLTGGVVCM+L        
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVLA------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                    Y SHY                                              
Sbjct: 61  --ICLVLMSYTSHY---------------------------------------------- 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
               P +   +SLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRI+ATA
Sbjct: 121 ----PASTDDFSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATA 169

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMV 169

[Close]
BLAST of MELO3C008483 vs. ExPASy TrEMBL
Match: A0A6J1CHR6 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.2e-59
Identity = 137/228 (60.09%), Postives = 143/228 (62.72%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLS GVF DDEER QSLLDEDSEDLCSL+PVQRLY FG CLTGGVVCM+L        
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVL-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRI+ATA
Sbjct: 121 -----------SLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. ExPASy TrEMBL
Match: A0A6J1HVF1 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111467788 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 5.1e-57
Identity = 135/228 (59.21%), Postives = 140/228 (61.40%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKL  GVF DDEER QSLLDEDSEDLCSLTPVQRLY FGGCLTGGVVCMI+        
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKP+KFA LFTFGNVLAVGSTAFLFGPGQQ+RMMFDSVRI+ATA
Sbjct: 121 -----------SLLVFAKPIKFAALFTFGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATA 149

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICAL IHNKILTV AM SEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALLIHNKILTVIAMTSEICALIWYSLSYIPFARRMV 149

[Close]
BLAST of MELO3C008483 vs. ExPASy TrEMBL
Match: A0A0A0LC39 (Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_3G603050 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 5.1e-57
Identity = 138/228 (60.53%), Postives = 141/228 (61.84%), Query Frame = 0 

Query: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILVWTFDPFP 60
           MWKLS+GVFV DEERSQSLLDEDSEDLCSLT VQRLYAFGGCLTGGVVCMIL        
Sbjct: 1   MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMIL-------- 60

Query: 61  RLDATAFNWYHSHYLNLAVWVRSLAISNESSESHRRIPKSDNTWSNKQAIDSTRLGDGAS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQRNPPNLGGWSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATA 180
                      SLLVFAKPLK AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI ATA
Sbjct: 121 -----------SLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA 148

Query: 181 IYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           IYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRM+
Sbjct: 181 IYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMV 148

[Close]
BLAST of MELO3C008483 vs. TAIR 10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-35
Identity = 73/97 (75.26%), Postives = 86/97 (88.66%), Query Frame = 0 

Query: 132 SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALI 191
           S++VF  P+KFA+LFTFGNVLA+GSTAFL GP QQ+ MMFD VR  AT+IY+GCVV+ALI
Sbjct: 55  SMIVFGIPIKFALLFTFGNVLAIGSTAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALI 114

Query: 192 CALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           CAL IH+KILTV A++ EICALIWYSLSYIPFARRM+
Sbjct: 115 CALLIHSKILTVLAILCEICALIWYSLSYIPFARRMV 151

[Close]
BLAST of MELO3C008483 vs. TAIR 10
Match: AT5G23550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 0 

Query: 132 SLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALI 191
           S+LVF  P+KF + FT GN++A+GSTAFL GP +Q+ MM D  RI+ATA+YL  +++AL 
Sbjct: 67  SMLVFFNPVKFGITFTLGNLMALGSTAFLIGPQRQVTMMLDPARIYATALYLASIIIALF 126

Query: 192 CALWIHNKILTVFAMISEICALIWYSLSYIPFARRMI 229
           CAL++ NK+LT+ A+I E   LIWYSLSYIPFAR M+
Sbjct: 127 CALYVRNKLLTLLAIILEFTGLIWYSLSYIPFARTMV 163

[Close]
BLAST of MELO3C008483 vs. TAIR 10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 46.2 bits (108), Expect = 4.5e-05
Identity = 27/84 (32.14%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 139 PLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHN 198
           P KFA+ FT G    +GS   L GP  Q+  M    R+ +T  ++  +V  +  ++ +H+
Sbjct: 119 PQKFAICFTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLHS 178

Query: 199 KILTVFAMISEICALIWYSLSYIP 223
            IL+V   + ++ AL++Y +SY P
Sbjct: 179 YILSVLFSVLQVLALVYYCISYFP 202

[Close]
BLAST of MELO3C008483 vs. TAIR 10
Match: AT5G56020.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 43.1 bits (100), Expect = 3.8e-04
Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 0 

Query: 139 PLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHN 198
           P KFA+ FT G    +GS   L GP  Q+  M  + R+  T  ++  +V  +  ++ +H+
Sbjct: 124 PQKFAICFTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHS 183

Query: 199 KILTVFAMISEICALIWYSLSYIP 223
            IL+V     ++ AL +Y +SY P
Sbjct: 184 YILSVIFSALQVIALAYYCISYFP 207

The following BLAST results are available for this feature:
BLAST of MELO3C008483 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008441622.11.4e-6464.91PREDICTED: vesicle transport protein SFT2B [Cucumis melo][more]
XP_022141324.12.9e-6262.28vesicle transport protein SFT2B isoform X2 [Momordica charantia][more]
XP_038880533.14.2e-6162.28vesicle transport protein SFT2B [Benincasa hispida][more]
XP_022141325.16.7e-5960.09vesicle transport protein SFT2B isoform X3 [Momordica charantia][more]
XP_022945270.11.1e-5659.21vesicle transport protein SFT2B [Cucurbita moschata] >XP_022968626.1 vesicle tra... [more]
BLAST of MELO3C008483 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O955622.8e-1551.19Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1[more]
Q8WV193.0e-1447.62Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1[more]
Q5SSN71.2e-1345.36Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1[more]
Q5U3Y52.0e-1347.62Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=... [more]
Q8VD574.4e-1347.62Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1[more]
BLAST of MELO3C008483 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B3W06.7e-6564.91Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103485702 PE=3 SV=1[more]
A0A6J1CIC01.4e-6262.28Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV... [more]
A0A6J1CHR63.2e-5960.09Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV... [more]
A0A6J1HVF15.1e-5759.21Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111467788 PE=3 SV=1[more]
A0A0A0LC395.1e-5760.53Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_3G603050 PE=3 SV=1[more]
BLAST of MELO3C008483 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24170.12.5e-3575.26Got1/Sft2-like vescicle transport protein family [more]
AT5G23550.12.5e-2758.76Got1/Sft2-like vescicle transport protein family [more]
AT4G26550.14.5e-0532.14Got1/Sft2-like vescicle transport protein family [more]
AT5G56020.13.8e-0432.14Got1/Sft2-like vescicle transport protein family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 133..228
e-value: 3.5E-32
score: 111.1
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 11..53
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 132..228
NoneNo IPR availablePANTHERPTHR23137:SF29VESICLE TRANSPORT PROTEINcoord: 132..228
NoneNo IPR availablePANTHERPTHR23137:SF29VESICLE TRANSPORT PROTEINcoord: 11..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008483.1MELO3C008483.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016021 integral component of membrane