MELO3C008450 (gene) Melon (DHL92) v4

Overview
NameMELO3C008450
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionExtra-large guanine nucleotide-binding protein 1-like isoform X2
Locationchr03: 6610196 .. 6610552 (+)
RNA-Seq ExpressionMELO3C008450
SyntenyMELO3C008450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCCTTTCTCCAGACGTCATGAGCAGTGCGTCGAGACAAGCTTCTCTGACATCGCATCAAGAGACAGGTACTCCCGACGAAGGCAGGGGACGTTAAAAGTCCCTCATTACCGACGTGCTCCATCCGTCAGCATTGACGGCGTCGAGAGTAAGGCATTTATGACGGGGTTCTATTTTCGCATCAGGAATTCCTCCCACGACACAATACAACCGACTTACTTTCTGATGGTACCATATACATTAGGAGATCCTTTCTCGATGCCTTTGGATAAAAATACCGATACCAGACGATATCGGGAGATCCCCGATTTCTTGTATTGTATAGACACAATGTGGACAAGTGTTTATCGGTGA

mRNA sequence

ATGATGCCTTTCTCCAGACGTCATGAGCAGTGCGTCGAGACAAGCTTCTCTGACATCGCATCAAGAGACAGGTACTCCCGACGAAGGCAGGGGACGTTAAAAGTCCCTCATTACCGACGTGCTCCATCCGTCAGCATTGACGGCGTCGAGAGTAAGGCATTTATGACGGGGTTCTATTTTCGCATCAGGAATTCCTCCCACGACACAATACAACCGACTTACTTTCTGATGGTACCATATACATTAGGAGATCCTTTCTCGATGCCTTTGGATAAAAATACCGATACCAGACGATATCGGGAGATCCCCGATTTCTTGTATTGTATAGACACAATGTGGACAAGTGTTTATCGGTGA

Coding sequence (CDS)

ATGATGCCTTTCTCCAGACGTCATGAGCAGTGCGTCGAGACAAGCTTCTCTGACATCGCATCAAGAGACAGGTACTCCCGACGAAGGCAGGGGACGTTAAAAGTCCCTCATTACCGACGTGCTCCATCCGTCAGCATTGACGGCGTCGAGAGTAAGGCATTTATGACGGGGTTCTATTTTCGCATCAGGAATTCCTCCCACGACACAATACAACCGACTTACTTTCTGATGGTACCATATACATTAGGAGATCCTTTCTCGATGCCTTTGGATAAAAATACCGATACCAGACGATATCGGGAGATCCCCGATTTCTTGTATTGTATAGACACAATGTGGACAAGTGTTTATCGGTGA

Protein sequence

MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYFRIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR
Homology
[Close]
BLAST of MELO3C008450 vs. NCBI nr
Match: TYK18654.1 (hypothetical protein E5676_scaffold390G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 251.5 bits (641), Expect = 3.5e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYF 60
           MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYF
Sbjct: 1   MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYF 60

Query: 61  RIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR 119
           RIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR
Sbjct: 61  RIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR 118

[Close]
BLAST of MELO3C008450 vs. NCBI nr
Match: KAA0055345.1 (hypothetical protein E6C27_scaffold80G001890 [Cucumis melo var. makuwa] >TYJ99271.1 hypothetical protein E5676_scaffold248G004830 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMT 57
          MMPF +R EQCV  +F D ASR  +SRR +GT +VP+ R  PSV IDGV SK F T
Sbjct: 1  MMPFPQRREQCVRRTFFDAASRVPFSRRGKGTSEVPYCRCGPSVGIDGVGSKTFPT 56

[Close]
BLAST of MELO3C008450 vs. NCBI nr
Match: TYK13618.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 3   PFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYFRI 62
           PF R H + +  +FS +   + Y+RR + T +  H RR PSV+ID V +KAF T  +  +
Sbjct: 258 PFPRHHGEGIGDNFSSVVLGEMYTRRTKETSRAHHCRRPPSVNIDNVGNKAFPTLSHLHV 317

Query: 63  RNSSHDTIQPTYFLMVPYT 82
           RN S D ++PT  L    T
Sbjct: 318 RNCSPDAVRPTVILTAHLT 336

[Close]
BLAST of MELO3C008450 vs. NCBI nr
Match: KAA0045967.1 (extra-large guanine nucleotide-binding protein 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 3   PFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYFRI 62
           PF R H + +  +FS +   + Y+RR + T  V H RR PSV+ID V +KAF T  +  +
Sbjct: 307 PFPRHHGEGIGDNFSSVVLGEMYTRRTKETSGVHHCRRPPSVNIDNVGNKAFPTLSHLHV 366

Query: 63  RNSSHDTIQPTYFLMVPYT 82
           RN S D ++PT  L    T
Sbjct: 367 RNCSPDAVRPTVILTAHLT 385

[Close]
BLAST of MELO3C008450 vs. ExPASy TrEMBL
Match: A0A5D3D548 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00170 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.7e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYF 60
           MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYF
Sbjct: 1   MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYF 60

Query: 61  RIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR 119
           RIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR
Sbjct: 61  RIRNSSHDTIQPTYFLMVPYTLGDPFSMPLDKNTDTRRYREIPDFLYCIDTMWTSVYR 118

[Close]
BLAST of MELO3C008450 vs. ExPASy TrEMBL
Match: A0A5A7UNY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004830 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MMPFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMT 57
          MMPF +R EQCV  +F D ASR  +SRR +GT +VP+ R  PSV IDGV SK F T
Sbjct: 1  MMPFPQRREQCVRRTFFDAASRVPFSRRGKGTSEVPYCRCGPSVGIDGVGSKTFPT 56

[Close]
BLAST of MELO3C008450 vs. ExPASy TrEMBL
Match: A0A5A7TVQ1 (Extra-large guanine nucleotide-binding protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005150 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.6e-07
Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 3   PFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYFRI 62
           PF R H + +  +FS +   + Y+RR + T  V H RR PSV+ID V +KAF T  +  +
Sbjct: 307 PFPRHHGEGIGDNFSSVVLGEMYTRRTKETSGVHHCRRPPSVNIDNVGNKAFPTLSHLHV 366

Query: 63  RNSSHDTIQPTYFLMVPYT 82
           RN S D ++PT  L    T
Sbjct: 367 RNCSPDAVRPTVILTAHLT 385

[Close]
BLAST of MELO3C008450 vs. ExPASy TrEMBL
Match: A0A5D3CQZ8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001220 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.6e-07
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 3   PFSRRHEQCVETSFSDIASRDRYSRRRQGTLKVPHYRRAPSVSIDGVESKAFMTGFYFRI 62
           PF R H + +  +FS +   + Y+RR + T +  H RR PSV+ID V +KAF T  +  +
Sbjct: 258 PFPRHHGEGIGDNFSSVVLGEMYTRRTKETSRAHHCRRPPSVNIDNVGNKAFPTLSHLHV 317

Query: 63  RNSSHDTIQPTYFLMVPYT 82
           RN S D ++PT  L    T
Sbjct: 318 RNCSPDAVRPTVILTAHLT 336

The following BLAST results are available for this feature:
BLAST of MELO3C008450 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK18654.13.5e-63100.00hypothetical protein E5676_scaffold390G00170 [Cucumis melo var. makuwa][more]
KAA0055345.12.7e-0758.93hypothetical protein E6C27_scaffold80G001890 [Cucumis melo var. makuwa] >TYJ9927... [more]
TYK13618.11.4e-0639.24NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0045967.11.4e-0640.51extra-large guanine nucleotide-binding protein 1-like isoform X2 [Cucumis melo v... [more]
BLAST of MELO3C008450 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C008450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D5481.7e-63100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UNY51.3e-0758.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TVQ16.6e-0740.51Extra-large guanine nucleotide-binding protein 1-like isoform X2 OS=Cucumis melo... [more]
A0A5D3CQZ86.6e-0739.24NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C008450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008450.1MELO3C008450.1mRNA