MELO3C008378 (gene) Melon (DHL92) v4

Overview
NameMELO3C008378
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDUF4283 domain-containing protein
Locationchr03: 4906731 .. 4906979 (-)
RNA-Seq ExpressionMELO3C008378
SyntenyMELO3C008378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTGGTTAAGCAGAACGTAGAACAAAAGGGTCACCTAGCTGAAATTTTCAAGGTGGACAATAAGGGGAGAAAGGGCTGCTTGAAGATACCAGAGAGCATAGAACTAATAGGGTGGAGATCTTTTTTCAACATGCTGAATTACAAGGAAGAAACAGAAAAGTACCTCCTTCAAAAGTGCAAACCAGCAGAGGTGCTCACTCTTCCTCCTCCTCATCGAAACAGACACAGAAGGGAGGAGTGCTAG

mRNA sequence

ATGCCTTTGGTTAAGCAGAACGTAGAACAAAAGGGTCACCTAGCTGAAATTTTCAAGGTGGACAATAAGGGGAGAAAGGGCTGCTTGAAGATACCAGAGAGCATAGAACTAATAGGGTGGAGATCTTTTTTCAACATGCTGAATTACAAGGAAGAAACAGAAAAGTACCTCCTTCAAAAGTGCAAACCAGCAGAGGTGCTCACTCTTCCTCCTCCTCATCGAAACAGACACAGAAGGGAGGAGTGCTAG

Coding sequence (CDS)

ATGCCTTTGGTTAAGCAGAACGTAGAACAAAAGGGTCACCTAGCTGAAATTTTCAAGGTGGACAATAAGGGGAGAAAGGGCTGCTTGAAGATACCAGAGAGCATAGAACTAATAGGGTGGAGATCTTTTTTCAACATGCTGAATTACAAGGAAGAAACAGAAAAGTACCTCCTTCAAAAGTGCAAACCAGCAGAGGTGCTCACTCTTCCTCCTCCTCATCGAAACAGACACAGAAGGGAGGAGTGCTAG

Protein sequence

MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQKCKPAEVLTLPPPHRNRHRREEC
Homology
BLAST of MELO3C008378 vs. NCBI nr
Match: KAA0058964.1 (hypothetical protein E6C27_scaffold98G001490 [Cucumis melo var. makuwa] >TYK10996.1 hypothetical protein E5676_scaffold874G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 1.0e-40
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQK 60
          MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQK
Sbjct: 3  MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQK 62

Query: 61 CKPAEVLTLPPPHRNRHRREEC 83
          CKPAEVLTLPPPHRNRHRREEC
Sbjct: 63 CKPAEVLTLPPPHRNRHRREEC 84

BLAST of MELO3C008378 vs. NCBI nr
Match: KAA0057199.1 (hypothetical protein E6C27_scaffold280G00320 [Cucumis melo var. makuwa] >TYK18763.1 hypothetical protein E5676_scaffold257G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 5  KQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEE--TEKYLLQKCK 64
          K+   +KG++A++F+VD++GR+ C+ +P+  +  GW SF N+LN K +  T K+L+Q   
Sbjct: 6  KKTYNRKGYIAKVFRVDDRGRRCCILVPQGTDKGGWESFQNLLNMKSDLITRKFLVQAQP 65

Query: 65 PAEVLTL 70
              L L
Sbjct: 66 SKSTLVL 72

BLAST of MELO3C008378 vs. NCBI nr
Match: TYK13823.1 (hypothetical protein E5676_scaffold488G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 5.8e-04
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0

Query: 6  QNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEET 54
          +N  + G  AEIF++DNKGRK  + +PE I+  GW+SF  ML +K  +
Sbjct: 44 KNKSKSGSTAEIFRIDNKGRKCSVLVPEGIDKFGWKSFVAMLTFKHHS 91

BLAST of MELO3C008378 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 7.5e-04
Identity = 21/52 (40.38%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 4   VKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEK 56
           V++   +KG++AEI++VD++GRK C+ +PE  E  GW  F ++L  K+++ K
Sbjct: 121 VQKTYNRKGYIAEIYRVDDRGRKCCILVPEGSEKSGWAQFVSLLYGKKDSSK 172

BLAST of MELO3C008378 vs. NCBI nr
Match: KAA0044333.1 (hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 7.5e-04
Identity = 20/51 (39.22%), Postives = 37/51 (72.55%), Query Frame = 0

Query: 2  PLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEE 53
          P +++N  +KG++AEI++VD++GRK C+ +PE  +  GW  F ++L  K++
Sbjct: 17 PKLQRNTNKKGYIAEIYRVDDRGRKCCILVPEGSKKSGWAQFVSLLYGKKD 67

BLAST of MELO3C008378 vs. ExPASy TrEMBL
Match: A0A5D3CKN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00320 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.9e-41
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQK 60
          MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQK
Sbjct: 3  MPLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEKYLLQK 62

Query: 61 CKPAEVLTLPPPHRNRHRREEC 83
          CKPAEVLTLPPPHRNRHRREEC
Sbjct: 63 CKPAEVLTLPPPHRNRHRREEC 84

BLAST of MELO3C008378 vs. ExPASy TrEMBL
Match: A0A5D3D5E9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00670 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 5  KQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEE--TEKYLLQKCK 64
          K+   +KG++A++F+VD++GR+ C+ +P+  +  GW SF N+LN K +  T K+L+Q   
Sbjct: 6  KKTYNRKGYIAKVFRVDDRGRRCCILVPQGTDKGGWESFQNLLNMKSDLITRKFLVQAQP 65

Query: 65 PAEVLTL 70
              L L
Sbjct: 66 SKSTLVL 72

BLAST of MELO3C008378 vs. ExPASy TrEMBL
Match: A0A5D3CPN2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00870 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-04
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0

Query: 6  QNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEET 54
          +N  + G  AEIF++DNKGRK  + +PE I+  GW+SF  ML +K  +
Sbjct: 44 KNKSKSGSTAEIFRIDNKGRKCSVLVPEGIDKFGWKSFVAMLTFKHHS 91

BLAST of MELO3C008378 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-04
Identity = 21/52 (40.38%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 4   VKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEETEK 56
           V++   +KG++AEI++VD++GRK C+ +PE  E  GW  F ++L  K+++ K
Sbjct: 121 VQKTYNRKGYIAEIYRVDDRGRKCCILVPEGSEKSGWAQFVSLLYGKKDSSK 172

BLAST of MELO3C008378 vs. ExPASy TrEMBL
Match: A0A5A7TLE2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00570 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-04
Identity = 20/51 (39.22%), Postives = 37/51 (72.55%), Query Frame = 0

Query: 2  PLVKQNVEQKGHLAEIFKVDNKGRKGCLKIPESIELIGWRSFFNMLNYKEE 53
          P +++N  +KG++AEI++VD++GRK C+ +PE  +  GW  F ++L  K++
Sbjct: 17 PKLQRNTNKKGYIAEIYRVDDRGRKCCILVPEGSKKSGWAQFVSLLYGKKD 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0058964.11.0e-40100.00hypothetical protein E6C27_scaffold98G001490 [Cucumis melo var. makuwa] >TYK1099... [more]
KAA0057199.14.0e-0537.31hypothetical protein E6C27_scaffold280G00320 [Cucumis melo var. makuwa] >TYK1876... [more]
TYK13823.15.8e-0445.83hypothetical protein E5676_scaffold488G00870 [Cucumis melo var. makuwa][more]
KAA0050054.17.5e-0440.38hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa][more]
KAA0044333.17.5e-0439.22hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CKN94.9e-41100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D5E91.9e-0537.31DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3CPN22.8e-0445.83DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7U4953.6e-0440.38DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TLE23.6e-0439.22DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008378.1MELO3C008378.1mRNA