MELO3C008320 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008320
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RRM domain-containing protein
Location	chr03: 3628598 .. 3634056 (-)
RNA-Seq Expression	MELO3C008320
Synteny	MELO3C008320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAATAGCCCATTTCAACTATTAAGGCCCAAAAGCCCATTTAGAAGTTAGAAAACAGAAAACCCTAAATAACGTTTCCCTTTTCCACGATTTTTCTCTCTCGTCCTCCCCGATTCTGTTCTCCCTTCACCGCCAATTTCGAAGTTTTCAGCGTCGATCACCCCTTTCTCCGCCGCTGTCATAGTTGTTCGATCTCCCTCCGTCAGTGAAGATGCGCATAATCTAGGCCAGAAACTCACGGATACCAAAATGATCTGAATGCTTGTTTGTTCTTCATGGTGAATTTTTTTCTCTTTTGTTGTGTCTTGTAGTTCTTAATCTTATTTTACAGTATGAACAATTAGGCTAACTCCTTTAATGGCCGTATTAGATCTCTTATTAGAGATGGGATCGGCGAAGGATGAGCAATTTTCCATGTTTGAGGAGAAGGTAAAACGGACTGTGTATGTTGATAATCTCTCTCCTCAAGTAACTGAGCCTGTTTTGAGAACTGCTTTAGATCAGTTTGGGACTGTGGTCAATGTCCATTTTATTCCAAATTACACGGAGCCAATTAATAGCTCTCAATGTGCTCTAGTGGAGATGAAGGATTCGAAGGAGGCGAAATCTGTGATCGCCGTTATAGCTCAATTCCCTTTCATGATGTCTGGAATGCCGAGACCGGTGAGGGCTCGCCCTGCCGAAGCAGAAATGTTTGATGATCGTCCTGTAAAGCCTGGTAGGAAGATTAGCTTTAGATGGCTGGAAAGTGATGATCCTGATTTTGAAGTGGCCAGACAAATCAAGCGTCTTACGAAGAAACATGTGGCTGAAGCTGCATTTTTGCTCAAGGTATGAATTTCAGAATCTCAGTCTCTCAACTTGAATTCCAATTTAGTGCTTAAGTGATTGCATTTATGAACTTTAATTTGTGATTCTTAGGCGATGGTTGATATTTATTAGATGGATGTTTGTTAATTAAGCACAACGTGGCACAGCTGACAAAAGTAAGAGGTTAGTTAGACAAAATGAAGGGACAAATTCAATCTGCCTAGTAGATTGTTGTCACTCGATTCTGTTTAGCTATCCTCTCTCTCGTCAACCATTTTTTTGTCATATTCTGCTCAATCAATCTATTACCGTTTGTTTATCTAATAAATACATCACATTATCAGTGGATGATAATCGAAAGTAGTATGTAATTAGATCCTTTTAAGTTTAAAATTAAATAAATACAGACCATTAACATTCGGACTTGATTTTTAATATGGTCAAATTATAAGATTGGTTTCACAACTTTGAGATTTTCCCTTGATTATCTAGTTAATATTAGTGCTGTTGATGCATAGCCGGGCGCTCGCCAGAGGCGAGAAAGTACCTAAGATAAGAAGCACTTTTAGCAAAGGGCTTGCCTTTCACACCTTTTAGTTGCCTTGAACATATGTGCAAGGCAACGCAGACGCTCGTCTTGTCAATTGTTCAACTTACATTTTTAGCAAAAAAAAATTCATTCTCCAATACTTTGATTAAGAGGAAGTATTGAAGTTTGTAAGGTAGAATTTGAAAGATCAAAGGATGGAAGAAAAATTGAAGAGAAAAAGAGTAAAAGAAGTAGAATTTATAGTTTAATATTATTATTTTATTAACTGCATCCTGATTCACTCCAATAATCGACTCCTTTTTTGTTGCCTCTTATTATCATGTATAATTACAGTTTTAAAATTAGTAATTATTTTGTTATATTTTCTGTTATTCTGTTTTGATAATACTGTACTGTAGCAGAGTATTATAAATACTCTTAATTACCATCAGATTTAATCAACGAGAATACACTTTAGTTATTAACCATTGGGCATTAGTTTTAAAATAAGACACCCTTTGGATGTCTACTCAATCTACCCCCTGACTATAAACATCTAAAAATATTCGGTTGTGCCTGTTACCCTTTACTAAAACAATACAATTATCATTAGCTCCAACCAAAAACCTCTCACTGCATCTTCCTTGGTTATCCCTTTGACTACAAAGGTTACATGTGTTACAATATGAGCATTGGAAAATTTTTCATACCTAGACATGTCATCTTTGATGGGACTGTTTTTCCCTTCTCAATAACCCCACAAAACAGCCCCACAAAAGATAACCATACAAAACCTATAAAACCCCATCAAATACCTTTATCCCTATTCCTAAAAGATTCCCCACCTATTCCTAGTATGAGTAATAAAAGTGCTATGCCATCTATGCCAACAATCAGTTCTTCACAAACAGATGAGTCCTATCTAAACAGTGAACTGAATACTGAAACTGAAATGCACACAAATGCACCCATCATAAATGCCCATCCAAAGCAAACCAGAAGCAAATCTGGTATATCAAAGAAGAAAGTTTTTGTTGCTGCAACACATCTTCCCAAAAATTCTGTTGATGAAAATGAACCAAGCTCTTACACCCAAGCATCTAAAGATTTAGTTTGGCAAAATGCAATGAAAGAAGAATATGATGCTCTACTGAAACAAGGAACATGGAAACTCACCAGTCTACCACCAAACAAACCAGCCATTGGCTGCGAATGGGTATACAAAATAAGAAGAAATCCCGATGGAACCATTACTAGACACAAAGCAAGATTAGTTGCCAAGGGATACCATCAACAGGAAGGCATAGACTTTGAAGAGACCTTTATCCCAATTGTAAAGAAACCTACTGTTCGGATAGTTCTATCTTTAGCTACACATTTTGAATGGAAACTAAGGCAACTTGATGTTAAAAATTCCTTTTTACATGGCGAACTCCGTGAAGAAGTCTATATGCAACAACCACAAGGTTTTGTTGACAAAACAAGACCAAACCTAGTGTGCAAACTCAGAAAATCATTATATGGCCTCAAACAAGCTCCTCGAGCTTGGTTTGAATGTTTCACAGCTCACCTATTGACACTTGGCTTTAATGCTTCGAATGACAATAGCTCATTGTTTGTTCGAAAAATTGGAAAATCTACCACTTATCTCCTACTTTATGCAGATGACATCATAATAACAGGCAACAACCATCCATACATTGATGTGCTAATCAGTCAGCTGCAGCAGAAGTTTGATACAACTGACTTGGGAATGTCGAAATATTTTCTGGGGCTTGAAATCCTGAGGAACTCATCTGGTATCTTTGTCACACAAACAAAATATGCTAAGGATGTACTACAAAGGTTTGGAATGAATGGATGTAAACCATGTAATACTCCAATTGCTATACATTCCTTTAGTGACAAACCAGACGATTCATGTTCAAATGAAGATGTCAACCTATAGAACTATTATTGGAGCCCTCCGATATCTCTCCTTTACTCGACCAGACATCATCTTCTCAGTAAGCAAACTCTCACAGTTAATGCACTCACCTGCCTATTGCCATCTTACAGCAGCCAAAAGAGTACTAAGATACATCAGTGGAACCACTTCAAAAGGCATACTCTTCAAAAAGTCCATAAATCCATTCAGAGTAAATGCATTCTCAGATTTAGATTGGGCCGGAAATAATCCTATATCATGGGTTACCAAAAAGTAGTCCACTGTATCTTGAAGTTCAACCGAAGCTGAATATAGAGCCCTTGCAACAACAACTTCTGAAATTTTTTGGATCCGACAACTCCTTCGAGATTTAGATGTATTTGGAAGAGAACCTCCTTGTTTATGGCGTGACAACAAGTCTGTCTTCCAACTTGCTCATAACCCTGTCTTCCATGGTCAAACCCAACACAGAAGTGGATTTTCACTTTATAACGGAAAAAGTTGTCCAAAATGACATTACACTGCTGTACATTCCCTCCACAGAACAGCTCGCTTATATATTCACAAAACCTCTCACTATTGATTGCTTCCACACTCTTCGATCCAAACTTATGCCTTAAGCCTAAAGTGCATCAGTTTGAGGAGGATATTATCATGTATAATTACAGTTTTAAAATTAGTTATTATTTTTTGATAATACTGTACTGTAGCAGAGTATTATAAATACTCTTAATTACCATCAGATTTGATCAATGAGAATACACTTCAGTTATTAACCATTGGGCATTAGTTTTCACCTCTTACCTTTAGGCGATTAAAAAGTTTGTCACCTTTAGGTGGCACCTTGGACCTTGAAAACACCGGTTCATATAATTAACTCTTTGGTAGGTCTCCTCAACTTTTCTGTTGTGTTTTATAGGTGTCTATTGTGAAACCCAATATTCCCGTAGGTTTAGTTTTTTCATGCTTTTGCACCAAACACACTTGAAAATTGAAATCAACCCATATGGATACCGGCGTATTGCTCAAGTAAGTATTAAGCTAGCGTAGTTAACAACAGGTTTGTTAGGCTCGAAGTTCAAATGTTTGACACTTTTTGAAGTACAAAAGATTAAAGAGATACAAACTTGGAAGCCGGGGGTCTATTGGAAAACGTTTAGAATAATGGGCTAAGTAAATGGATTCTAAAAGTTCAGGTTTGTCCAATTTCTTTGCAGCAACATTTGGCGGAAGAGGAAAAGCTTGCAAAGCAGCAACAAGAAACGCTGAGAGGAAACTACAAGAAATATGAGATTGTAGATAGTGTAATGGCCGATGGAACTGCCCGCAGGTTAGCAAAAAATTATAATATGCGAGTTTCAGATGATTAATGCCTTTGAAGCCTTGCTTTTGTAACCTCTTAATGCCACTGATTTTTACCTGTAAATTTGTACAAATTGTCATTTATATGGCTGAATAGAGATGAATTAGAGACTTCTTTTGTGATTTAGATTTTAGAGGGAGAAAAACAAATATTTAGTATAATACTCCTAACAACACTCTTGGCATTTGTTTTAAAAGAAAAACATTGTATTTTCCCCATCTTTCAGGTGTTCATTCTAGGATTTCATCACTGATCTTAACAAAAAGCCTAGTAAAATCATCCCAAATGTCTGATTTAAATATATGAGTCCATGATGTGAACTTTTAGCTTAAACTTTCATCCTTATTCACAAAAGAACATTGTTTTTAACAAAATTTTTATTAAGAAATAAGATCTATAATATGCACGATTGGGAGAGAGGAATCAACCAAGGCTTGAAGTTATGGATCAAGTGTTGTCAGTTGAGGATGTAAGAGTTGGACACGAAAGGATGAAACAATAAAATTGTGGCATCTCAGCTTGTTCACATTAGCTGCAACAAGTTAAAGATAGTGATAAATAAGTTTTATGCTTAAAGGACTGTCTCAACTTGTTATTTAGAGAAAACATGGTTTCATTTATTTGAAGAAAGATGTATCAACTCTCATTCAAAGAGTCCAAGTTCATGCAAAGCAACCATAGGAGCTAGTTTAGTTGAACTTATTAGTTCGGTTAAATAATAATCTTTAATTATTAGTATATTATGATCGCAAATTCGTGTTAGACACGTAATAGATATTGATATCTATGATATCTATAGATACGTATTTGACACACGATTTGACGTATT

mRNA sequence

CTTCAATAGCCCATTTCAACTATTAAGGCCCAAAAGCCCATTTAGAAGTTAGAAAACAGAAAACCCTAAATAACGTTTCCCTTTTCCACGATTTTTCTCTCTCGTCCTCCCCGATTCTGTTCTCCCTTCACCGCCAATTTCGAAGTTTTCAGCGTCGATCACCCCTTTCTCCGCCGCTGTCATAGTTGTTCGATCTCCCTCCGTCAGTGAAGATGCGCATAATCTAGGCCAGAAACTCACGGATACCAAAATGATCTGAATGCTTGTTTGTTCTTCATGATCTCTTATTAGAGATGGGATCGGCGAAGGATGAGCAATTTTCCATGTTTGAGGAGAAGGTAAAACGGACTGTGTATGTTGATAATCTCTCTCCTCAAGTAACTGAGCCTGTTTTGAGAACTGCTTTAGATCAGTTTGGGACTGTGGTCAATGTCCATTTTATTCCAAATTACACGGAGCCAATTAATAGCTCTCAATGTGCTCTAGTGGAGATGAAGGATTCGAAGGAGGCGAAATCTGTGATCGCCGTTATAGCTCAATTCCCTTTCATGATGTCTGGAATGCCGAGACCGGTGAGGGCTCGCCCTGCCGAAGCAGAAATGTTTGATGATCGTCCTGTAAAGCCTGGTAGGAAGATTAGCTTTAGATGGCTGGAAAGTGATGATCCTGATTTTGAAGTGGCCAGACAAATCAAGCGTCTTACGAAGAAACATGTGGCTGAAGCTGCATTTTTGCTCAAGCACAACGTGGCACAGCTGACAAAAGTAAGAGGTGTCTATTGTGAAACCCAATATTCCCGTAGGTTTAGTTTTTTCATGCTTTTGCACCAAACACACTTGAAAATTGAAATCAACCCATATGGATACCGGCGTATTGCTCAACAACATTTGGCGGAAGAGGAAAAGCTTGCAAAGCAGCAACAAGAAACGCTGAGAGGAAACTACAAGAAATATGAGATTGTAGATAGTGTAATGGCCGATGGAACTGCCCGCAGGTTAGCAAAAAATTATAATATGCGAGTTTCAGATGATTAATGCCTTTGAAGCCTTGCTTTTGTAACCTCTTAATGCCACTGATTTTTACCTGTAAATTTGTACAAATTGTCATTTATATGGCTGAATAGAGATGAATTAGAGACTTCTTTTGTGATTTAGATTTTAGAGGGAGAAAAACAAATATTTAGTATAATACTCCTAACAACACTCTTGGCATTTGTTTTAAAAGAAAAACATTGTATTTTCCCCATCTTTCAGGTGTTCATTCTAGGATTTCATCACTGATCTTAACAAAAAGCCTAGTAAAATCATCCCAAATGTCTGATTTAAATATATGAGTCCATGATGTGAACTTTTAGCTTAAACTTTCATCCTTATTCACAAAAGAACATTGTTTTTAACAAAATTTTTATTAAGAAATAAGATCTATAATATGCACGATTGGGAGAGAGGAATCAACCAAGGCTTGAAGTTATGGATCAAGTGTTGTCAGTTGAGGATGTAAGAGTTGGACACGAAAGGATGAAACAATAAAATTGTGGCATCTCAGCTTGTTCACATTAGCTGCAACAAGTTAAAGATAGTGATAAATAAGTTTTATGCTTAAAGGACTGTCTCAACTTGTTATTTAGAGAAAACATGGTTTCATTTATTTGAAGAAAGATGTATCAACTCTCATTCAAAGAGTCCAAGTTCATGCAAAGCAACCATAGGAGCTAGTTTAGTTGAACTTATTAGTTCGGTTAAATAATAATCTTTAATTATTAGTATATTATGATCGCAAATTCGTGTTAGACACGTAATAGATATTGATATCTATGATATCTATAGATACGTATTTGACACACGATTTGACGTATT

Coding sequence (CDS)

ATGGGATCGGCGAAGGATGAGCAATTTTCCATGTTTGAGGAGAAGGTAAAACGGACTGTGTATGTTGATAATCTCTCTCCTCAAGTAACTGAGCCTGTTTTGAGAACTGCTTTAGATCAGTTTGGGACTGTGGTCAATGTCCATTTTATTCCAAATTACACGGAGCCAATTAATAGCTCTCAATGTGCTCTAGTGGAGATGAAGGATTCGAAGGAGGCGAAATCTGTGATCGCCGTTATAGCTCAATTCCCTTTCATGATGTCTGGAATGCCGAGACCGGTGAGGGCTCGCCCTGCCGAAGCAGAAATGTTTGATGATCGTCCTGTAAAGCCTGGTAGGAAGATTAGCTTTAGATGGCTGGAAAGTGATGATCCTGATTTTGAAGTGGCCAGACAAATCAAGCGTCTTACGAAGAAACATGTGGCTGAAGCTGCATTTTTGCTCAAGCACAACGTGGCACAGCTGACAAAAGTAAGAGGTGTCTATTGTGAAACCCAATATTCCCGTAGGTTTAGTTTTTTCATGCTTTTGCACCAAACACACTTGAAAATTGAAATCAACCCATATGGATACCGGCGTATTGCTCAACAACATTTGGCGGAAGAGGAAAAGCTTGCAAAGCAGCAACAAGAAACGCTGAGAGGAAACTACAAGAAATATGAGATTGTAGATAGTGTAATGGCCGATGGAACTGCCCGCAGGTTAGCAAAAAATTATAATATGCGAGTTTCAGATGATTAA

Protein sequence

MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSSQCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWLESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQTHLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYNMRVSDD

Homology

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BLAST of MELO3C008320 vs. NCBI nr
Match: XP_008441485.1 (PREDICTED: uncharacterized protein LOC103485592 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 3.2e-98
Identity = 199/246 (80.89%), Postives = 199/246 (80.89%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS
Sbjct: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL
Sbjct: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           ESDDPDFEVARQIKRLTKKHVAEAAFLLK                               
Sbjct: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           QHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN
Sbjct: 181 ----------------QHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 199

Query: 241 MRVSDD 247
           MRVSDD
Sbjct: 241 MRVSDD 199

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BLAST of MELO3C008320 vs. NCBI nr
Match: XP_004138411.1 (uncharacterized protein LOC101221287 [Cucumis sativus] >KGN45809.1 hypothetical protein Csa_005005 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 187/246 (76.02%), Postives = 195/246 (79.27%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGS KDEQF+MFEEKVKRTVYVDNLS QVTEPVLRTALDQFGTVV+VHFIPNYTEPINSS
Sbjct: 1   MGSEKDEQFAMFEEKVKRTVYVDNLSLQVTEPVLRTALDQFGTVVSVHFIPNYTEPINSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEAKSVI VIAQFPFMMSGMPRPVRARPAE EMFDDRPVKPGRKISFRWL
Sbjct: 61  QCALVEMKDSKEAKSVITVIAQFPFMMSGMPRPVRARPAEVEMFDDRPVKPGRKISFRWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           ESDDPDFEVARQIKRL+KKHVAEAAFL+K                               
Sbjct: 121 ESDDPDFEVARQIKRLSKKHVAEAAFLVK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           QH+AEEEKLAKQQQETL+GNYKKYEIVDSVMADGTARRLAK+YN
Sbjct: 181 ----------------QHMAEEEKLAKQQQETLKGNYKKYEIVDSVMADGTARRLAKHYN 199

Query: 241 MRVSDD 247
           MR+SDD
Sbjct: 241 MRISDD 199

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BLAST of MELO3C008320 vs. NCBI nr
Match: XP_038886330.1 (uncharacterized protein LOC120076542 [Benincasa hispida])

HSP 1 Score: 339.0 bits (868), Expect = 3.5e-89
Identity = 180/246 (73.17%), Postives = 190/246 (77.24%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGS KDEQF+MFEEKVKRTVYVDNLSP VTEPVLRTALDQFGTVV+VHFIPNYTEPIN+S
Sbjct: 1   MGSMKDEQFAMFEEKVKRTVYVDNLSPHVTEPVLRTALDQFGTVVSVHFIPNYTEPINTS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKD KEAKSVI+VIAQFPFMMSGMPRPVRARPAE EMFDDRPVKPGRKISF WL
Sbjct: 61  QCALVEMKDLKEAKSVISVIAQFPFMMSGMPRPVRARPAEVEMFDDRPVKPGRKISFTWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           E DDPDFEVA+++K LT+KHVAEAAFLLKH                              
Sbjct: 121 EKDDPDFEVAKKMKLLTRKHVAEAAFLLKH------------------------------ 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                            HLAEEEKLAKQQQE L+GNYKKYEIV+SVMADGTARRLAK YN
Sbjct: 181 -----------------HLAEEEKLAKQQQEALKGNYKKYEIVESVMADGTARRLAKRYN 199

Query: 241 MRVSDD 247
           MRVSDD
Sbjct: 241 MRVSDD 199

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BLAST of MELO3C008320 vs. NCBI nr
Match: KAG6592987.1 (hypothetical protein SDJN03_12463, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.5 bits (802), Expect = 1.6e-81
Identity = 167/246 (67.89%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSA DEQ++ FEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVV+VHFIPN+TEPINSS
Sbjct: 59  MGSATDEQYAKFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVSVHFIPNFTEPINSS 118

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEA SVI+VIAQFPFMMSGMPRPVRA PAE EMFDDRP+KPGRKISF WL
Sbjct: 119 QCALVEMKDSKEANSVISVIAQFPFMMSGMPRPVRAYPAEVEMFDDRPIKPGRKISFVWL 178

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
             DDPDFEVA+++K LT++HVAEAAFLLK                               
Sbjct: 179 GKDDPDFEVAKKMKCLTQRHVAEAAFLLK------------------------------- 238

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           Q L EEEKLAKQQQ+ L+ NYKKYEIV+ VM DGTARRLA+ YN
Sbjct: 239 ----------------QQLVEEEKLAKQQQDALKANYKKYEIVEGVMTDGTARRLARRYN 257

Query: 241 MRVSDD 247
           MRV+DD
Sbjct: 299 MRVADD 257

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BLAST of MELO3C008320 vs. NCBI nr
Match: KAG7025396.1 (hypothetical protein SDJN02_11891, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.5 bits (802), Expect = 1.6e-81
Identity = 167/246 (67.89%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSA DEQ++ FEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVV+VHFIPN+TEPINSS
Sbjct: 58  MGSATDEQYAKFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVSVHFIPNFTEPINSS 117

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEA SVI+VIAQFPFMMSGMPRPVRA PAE EMFDDRP+KPGRKISF WL
Sbjct: 118 QCALVEMKDSKEANSVISVIAQFPFMMSGMPRPVRAYPAEVEMFDDRPIKPGRKISFVWL 177

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
             DDPDFEVA+++K LT++HVAEAAFLLK                               
Sbjct: 178 GKDDPDFEVAKKMKCLTQRHVAEAAFLLK------------------------------- 237

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           Q L EEEKLAKQQQ+ L+ NYKKYEIV+ VM DGTARRLA+ YN
Sbjct: 238 ----------------QQLVEEEKLAKQQQDALKANYKKYEIVEGVMTDGTARRLARRYN 256

Query: 241 MRVSDD 247
           MRV+DD
Sbjct: 298 MRVADD 256

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BLAST of MELO3C008320 vs. ExPASy TrEMBL
Match: A0A1S3B3J3 (uncharacterized protein LOC103485592 OS=Cucumis melo OX=3656 GN=LOC103485592 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 199/246 (80.89%), Postives = 199/246 (80.89%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS
Sbjct: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL
Sbjct: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           ESDDPDFEVARQIKRLTKKHVAEAAFLLK                               
Sbjct: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           QHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN
Sbjct: 181 ----------------QHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 199

Query: 241 MRVSDD 247
           MRVSDD
Sbjct: 241 MRVSDD 199

[Close]

BLAST of MELO3C008320 vs. ExPASy TrEMBL
Match: A0A0A0KAE7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013320 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.4e-93
Identity = 187/246 (76.02%), Postives = 195/246 (79.27%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGS KDEQF+MFEEKVKRTVYVDNLS QVTEPVLRTALDQFGTVV+VHFIPNYTEPINSS
Sbjct: 1   MGSEKDEQFAMFEEKVKRTVYVDNLSLQVTEPVLRTALDQFGTVVSVHFIPNYTEPINSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEAKSVI VIAQFPFMMSGMPRPVRARPAE EMFDDRPVKPGRKISFRWL
Sbjct: 61  QCALVEMKDSKEAKSVITVIAQFPFMMSGMPRPVRARPAEVEMFDDRPVKPGRKISFRWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           ESDDPDFEVARQIKRL+KKHVAEAAFL+K                               
Sbjct: 121 ESDDPDFEVARQIKRLSKKHVAEAAFLVK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           QH+AEEEKLAKQQQETL+GNYKKYEIVDSVMADGTARRLAK+YN
Sbjct: 181 ----------------QHMAEEEKLAKQQQETLKGNYKKYEIVDSVMADGTARRLAKHYN 199

Query: 241 MRVSDD 247
           MR+SDD
Sbjct: 241 MRISDD 199

[Close]

BLAST of MELO3C008320 vs. ExPASy TrEMBL
Match: A0A6J1KVQ1 (uncharacterized protein LOC111498019 OS=Cucurbita maxima OX=3661 GN=LOC111498019 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.2e-81
Identity = 165/246 (67.07%), Postives = 184/246 (74.80%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSA DEQ++ FEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVV+VHFIPN+TEPINSS
Sbjct: 1   MGSATDEQYAKFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVSVHFIPNFTEPINSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEA SVI+VI+QFPFMMSGMPRPVRA PAE EMFDDRP+KPGRKISF WL
Sbjct: 61  QCALVEMKDSKEANSVISVISQFPFMMSGMPRPVRAYPAEVEMFDDRPIKPGRKISFVWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
             +DPDFEVA+++K LT++HVAEAAFLLK                               
Sbjct: 121 GKEDPDFEVAKKMKCLTQRHVAEAAFLLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           Q L EEEKLAKQQQ+ L+GNYKKYEI++ VM DGTARRLA+ YN
Sbjct: 181 ----------------QQLVEEEKLAKQQQDALKGNYKKYEILEGVMTDGTARRLARRYN 199

Query: 241 MRVSDD 247
           MRV+DD
Sbjct: 241 MRVADD 199

[Close]

BLAST of MELO3C008320 vs. ExPASy TrEMBL
Match: A0A6J1H6P8 (uncharacterized protein LOC111460615 OS=Cucurbita moschata OX=3662 GN=LOC111460615 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.8e-81
Identity = 166/246 (67.48%), Postives = 182/246 (73.98%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSA DEQ+  FEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVV+VHFIPN+TEPINSS
Sbjct: 1   MGSATDEQYVKFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVSVHFIPNFTEPINSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKDSKEA SVI++IAQFPFMMSGMPRPVRA PAE EMFDDRP+KPGRKISF WL
Sbjct: 61  QCALVEMKDSKEANSVISLIAQFPFMMSGMPRPVRAYPAEVEMFDDRPIKPGRKISFVWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
             DDPDFEVA+++K LT++HVAEAAFLLK                               
Sbjct: 121 GKDDPDFEVAKKMKCLTQRHVAEAAFLLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           Q L EEEKLAKQQQ+ L+ NYKKYEIV+ VM DGTARRLA+ YN
Sbjct: 181 ----------------QQLVEEEKLAKQQQDALKANYKKYEIVEGVMTDGTARRLARRYN 199

Query: 241 MRVSDD 247
           MRV+DD
Sbjct: 241 MRVADD 199

[Close]

BLAST of MELO3C008320 vs. ExPASy TrEMBL
Match: A0A6J1DB90 (uncharacterized protein LOC111018537 OS=Momordica charantia OX=3673 GN=LOC111018537 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 5.1e-78
Identity = 160/246 (65.04%), Postives = 179/246 (72.76%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           MGSA +EQF+ FEEKVKRTVYVDNLSPQVTEPV+RTALDQFGTVV V FIPNY EP+NSS
Sbjct: 1   MGSATEEQFAAFEEKVKRTVYVDNLSPQVTEPVMRTALDQFGTVVRVQFIPNYMEPLNSS 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
           QCALVEMKD KEAKSVI+VIA+FPFM+SGMPRPVRARPAE EMFDDRP+KPG KISF WL
Sbjct: 61  QCALVEMKDLKEAKSVISVIAEFPFMISGMPRPVRARPAEVEMFDDRPIKPGSKISFSWL 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           + +DPDF+VA+++K  T+KH AE AFLLK                               
Sbjct: 121 DQNDPDFQVAKKMKLFTRKHAAETAFLLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           Q L EEEKLAKQQQE L+GNYKK+EIV+SVM DGTARRLAK Y+
Sbjct: 181 ----------------QQLLEEEKLAKQQQEVLKGNYKKHEIVESVMTDGTARRLAKCYD 199

Query: 241 MRVSDD 247
           MRV DD
Sbjct: 241 MRVFDD 199

[Close]

BLAST of MELO3C008320 vs. TAIR 10
Match: AT1G05970.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 175.3 bits (443), Expect = 6.2e-44
Identity = 95/242 (39.26%), Postives = 140/242 (57.85%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           M + ++  +  F E+V+RTVYVD L+P  T PV+ +A +QFGTV  V FIPNY  P    
Sbjct: 1   MATPEEVAYEKFLERVRRTVYVDELTPLATAPVISSAFNQFGTVKKVSFIPNYLGPKELP 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
              LVEM++ +  ++VI+ ++Q PFM++GMPRPVRA  AE  MF D+P KPGR + FRW+
Sbjct: 61  MGVLVEMENEEMTQAVISTVSQLPFMVAGMPRPVRACAAEPNMFVDKPKKPGRTVRFRWI 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           + +DPDF+ AR++KRL +KH AE +F+LK                               
Sbjct: 121 KPNDPDFDKARRVKRLARKHSAENSFMLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                           + L E EKL+KQQ ET   ++KK+E++D ++ DG A++LA  Y+
Sbjct: 181 ----------------KQLEEAEKLSKQQAETAVTHHKKFEMMDKLLYDGVAQKLAGRYD 195

Query: 241 MR 243
           ++
Sbjct: 241 LK 195

[Close]

BLAST of MELO3C008320 vs. TAIR 10
Match: AT1G05970.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 174.9 bits (442), Expect = 8.2e-44
Identity = 95/242 (39.26%), Postives = 139/242 (57.44%), Query Frame = 0


Query: 1   MGSAKDEQFSMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVNVHFIPNYTEPINSS 60
           M + ++  +  F E+V+RTVYVD L+P  T PV+ +A +QFGTV  V FIPNY  P    
Sbjct: 1   MATPEEVAYEKFLERVRRTVYVDELTPLATAPVISSAFNQFGTVKKVSFIPNYLGPKELP 60

Query: 61  QCALVEMKDSKEAKSVIAVIAQFPFMMSGMPRPVRARPAEAEMFDDRPVKPGRKISFRWL 120
              LVEM++ +  ++VI+ ++Q PFM++GMPRPVRA  AE  MF D+P KPGR + FRW+
Sbjct: 61  MGVLVEMENEEMTQAVISTVSQLPFMVAGMPRPVRACAAEPNMFVDKPKKPGRTVRFRWI 120

Query: 121 ESDDPDFEVARQIKRLTKKHVAEAAFLLKHNVAQLTKVRGVYCETQYSRRFSFFMLLHQT 180
           + +DPDF+ AR++KRL +KH AE +F+LK                               
Sbjct: 121 KPNDPDFDKARRVKRLARKHSAENSFMLK------------------------------- 180

Query: 181 HLKIEINPYGYRRIAQQHLAEEEKLAKQQQETLRGNYKKYEIVDSVMADGTARRLAKNYN 240
                             L E EKL+KQQ ET   ++KK+E++D ++ DG A++LA  Y+
Sbjct: 181 ------------------LEEAEKLSKQQAETAVTHHKKFEMMDKLLYDGVAQKLAGRYD 193

Query: 241 MR 243
           ++
Sbjct: 241 LK 193

The following BLAST results are available for this feature:

BLAST of MELO3C008320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441485.1	3.2e-98	80.89	PREDICTED: uncharacterized protein LOC103485592 [Cucumis melo]	[more]
XP_004138411.1	1.5e-92	76.02	uncharacterized protein LOC101221287 [Cucumis sativus] >KGN45809.1 hypothetical ...	[more]
XP_038886330.1	3.5e-89	73.17	uncharacterized protein LOC120076542 [Benincasa hispida]	[more]
KAG6592987.1	1.6e-81	67.89	hypothetical protein SDJN03_12463, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7025396.1	1.6e-81	67.89	hypothetical protein SDJN02_11891, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MELO3C008320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3J3	1.5e-98	80.89	uncharacterized protein LOC103485592 OS=Cucumis melo OX=3656 GN=LOC103485592 PE=...	[more]
A0A0A0KAE7	7.4e-93	76.02	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013320 PE=4 SV...	[more]
A0A6J1KVQ1	2.2e-81	67.07	uncharacterized protein LOC111498019 OS=Cucurbita maxima OX=3661 GN=LOC111498019...	[more]
A0A6J1H6P8	3.8e-81	67.48	uncharacterized protein LOC111460615 OS=Cucurbita moschata OX=3662 GN=LOC1114606...	[more]
A0A6J1DB90	5.1e-78	65.04	uncharacterized protein LOC111018537 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of MELO3C008320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05970.2	6.2e-44	39.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G05970.1	8.2e-44	39.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..212
None	No IPR available	PANTHER	PTHR36309	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 6..154 coord: 193..245
None	No IPR available	CDD	cd00590	RRM_SF	coord: 20..78 e-value: 8.70907E-9 score: 49.2257
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 19..97 e-value: 8.0E-5 score: 32.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 20..78 e-value: 1.8E-7 score: 30.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 18..101 score: 11.537011
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..95 e-value: 1.4E-12 score: 49.3
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 10..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008320.1	MELO3C008320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding