MELO3C008164 (gene) Melon (DHL92) v4

Overview
NameMELO3C008164
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionFibroin heavy chain
Locationchr03: 1341437 .. 1342014 (-)
RNA-Seq ExpressionMELO3C008164
SyntenyMELO3C008164
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAGTAGAGTTCCAAATTCAAACCAACATTACAATTTACAGATCTCTCTCTTTTTCATCATCTCACTATGAAATCAGACTCCTCCAGTTCCCCATGGAACAACTTCCACACCACCATTTTCAGTTTCGACCACGACCGCCGCAACACAAAGGAACTACCAGCCTTAGCCTTAGTCTTGGAAGCCGGGGGAGGAGCAGGAGTTGGCTGCGGCCTTGGATTCGGCTTCGGACTCGTCGGAGGGATCGGCCACGGCGGTGCCTCGCCCTGGAATCACCTTCACCTCGTATTTGGCCTGGGTGCCGGCTGCGGCGTTGGGTTAGGGCTTGGAATTGGGCAAGGCTTTGGATATGGCTTCTCCTTTGAATCTCTTGATTCTTATTTCTCTCATCTCAATTCTGATCCTAAACATAAGCAGCCTTCCCTCATTCAATTTTGAAATTTCCTTTTCTTACCCCTTACCTTGCCCTTTAATTTTATGTATTTTCTTCTCTTTTCACAATTTTTTGTATCTTTCAACATCTTTTTGGACTTCTTATTTCTCCATCTAATTTGTATGCACCAACTACACATTCATAT

mRNA sequence

CAAAAGTAGAGTTCCAAATTCAAACCAACATTACAATTTACAGATCTCTCTCTTTTTCATCATCTCACTATGAAATCAGACTCCTCCAGTTCCCCATGGAACAACTTCCACACCACCATTTTCAGTTTCGACCACGACCGCCGCAACACAAAGGAACTACCAGCCTTAGCCTTAGTCTTGGAAGCCGGGGGAGGAGCAGGAGTTGGCTGCGGCCTTGGATTCGGCTTCGGACTCGTCGGAGGGATCGGCCACGGCGGTGCCTCGCCCTGGAATCACCTTCACCTCGTATTTGGCCTGGGTGCCGGCTGCGGCGTTGGGTTAGGGCTTGGAATTGGGCAAGGCTTTGGATATGGCTTCTCCTTTGAATCTCTTGATTCTTATTTCTCTCATCTCAATTCTGATCCTAAACATAAGCAGCCTTCCCTCATTCAATTTTGAAATTTCCTTTTCTTACCCCTTACCTTGCCCTTTAATTTTATGTATTTTCTTCTCTTTTCACAATTTTTTGTATCTTTCAACATCTTTTTGGACTTCTTATTTCTCCATCTAATTTGTATGCACCAACTACACATTCATAT

Coding sequence (CDS)

ATGAAATCAGACTCCTCCAGTTCCCCATGGAACAACTTCCACACCACCATTTTCAGTTTCGACCACGACCGCCGCAACACAAAGGAACTACCAGCCTTAGCCTTAGTCTTGGAAGCCGGGGGAGGAGCAGGAGTTGGCTGCGGCCTTGGATTCGGCTTCGGACTCGTCGGAGGGATCGGCCACGGCGGTGCCTCGCCCTGGAATCACCTTCACCTCGTATTTGGCCTGGGTGCCGGCTGCGGCGTTGGGTTAGGGCTTGGAATTGGGCAAGGCTTTGGATATGGCTTCTCCTTTGAATCTCTTGATTCTTATTTCTCTCATCTCAATTCTGATCCTAAACATAAGCAGCCTTCCCTCATTCAATTTTGA

Protein sequence

MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLIQF
Homology
BLAST of MELO3C008164 vs. NCBI nr
Match: KAA0051071.1 (fibroin heavy chain [Cucumis melo var. makuwa] >TYK02741.1 fibroin heavy chain [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 1.8e-62
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG 60
           MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG
Sbjct: 1   MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG 60

Query: 61  HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI 120
           HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI
Sbjct: 61  HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI 120

Query: 121 QF 123
           QF
Sbjct: 121 QF 122

BLAST of MELO3C008164 vs. NCBI nr
Match: KGN63146.1 (hypothetical protein Csa_022245 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0

Query: 1   MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG 60
           MKSDSS+SPWNNF  TIF FD DRRNTKELP  ALVLEAGGGAGVGCGLG GFGLVGGIG
Sbjct: 1   MKSDSSNSPWNNF-PTIFCFDQDRRNTKELP--ALVLEAGGGAGVGCGLGIGFGLVGGIG 60

Query: 61  HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI 120
           H GASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYG SF+S+DSYFSHL S+PK KQPSLI
Sbjct: 61  HAGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGVSFQSVDSYFSHLISNPKPKQPSLI 119

Query: 121 QF 123
           QF
Sbjct: 121 QF 119

BLAST of MELO3C008164 vs. NCBI nr
Match: KAG6578355.1 (hypothetical protein SDJN03_22803, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 92/136 (67.65%), Postives = 101/136 (74.26%), Query Frame = 0

Query: 1   MKSDSSSSPW-------NNFHTTI----FS----FDHDRRNTKELPALALVLEAGGGAGV 60
           MKSD S+SPW       NNFHT      FS    FD +RRN K+ P   LVL+AGGGAGV
Sbjct: 1   MKSD-SNSPWKWNTAITNNFHTKADHHHFSLPNIFDANRRNAKQPP--PLVLDAGGGAGV 60

Query: 61  GCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYF 120
           GCG+G GFGLVGGIGHGGASPWNHLHLVFGLG GCGVGLGLGIG+G GYG SF+SLDSYF
Sbjct: 61  GCGVGLGFGLVGGIGHGGASPWNHLHLVFGLGLGCGVGLGLGIGKGIGYGISFDSLDSYF 120

Query: 121 SHLNSDPKHKQPSLIQ 122
           S    +P+ K P LIQ
Sbjct: 121 SDHKPNPRQK-PPLIQ 132

BLAST of MELO3C008164 vs. NCBI nr
Match: KAF5479947.1 (hypothetical protein F2P56_000728 [Juglans regia])

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-19
Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 0

Query: 26  NTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLG 85
           N K+   +  VL  GGG G+GCG G GFGLVGGIG+GG  PWNHL LVFG+G GCGVG+G
Sbjct: 44  NDKKAEGVVQVLGPGGGVGIGCGAGMGFGLVGGIGYGG-WPWNHLQLVFGVGIGCGVGVG 103

Query: 86  LGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSL 120
            G GQGFG G S +SL+SY S  +S   +K+  L
Sbjct: 104 FGYGQGFGLGLSLDSLESYISKQSSSDSNKRSIL 136

BLAST of MELO3C008164 vs. NCBI nr
Match: XP_041003309.1 (fibroin heavy chain [Juglans microcarpa x Juglans regia])

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-19
Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = 0

Query: 26  NTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLG 85
           N K+   +  VL  GGG G+GCG G GFGL+GGIG+GG  PWNHL LVFG+G GCGVG+G
Sbjct: 44  NDKKAEGVVQVLGPGGGVGIGCGAGMGFGLIGGIGYGG-WPWNHLQLVFGVGIGCGVGVG 103

Query: 86  LGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSL 120
            G GQGFG G S +SL+SY S  +S   +K+  L
Sbjct: 104 FGYGQGFGLGLSLDSLESYISKQSSSDSNKRSIL 136

BLAST of MELO3C008164 vs. ExPASy TrEMBL
Match: A0A5A7UC28 (Fibroin heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00440 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.8e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG 60
           MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG
Sbjct: 1   MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG 60

Query: 61  HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI 120
           HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI
Sbjct: 61  HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI 120

Query: 121 QF 123
           QF
Sbjct: 121 QF 122

BLAST of MELO3C008164 vs. ExPASy TrEMBL
Match: A0A0A0LSZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404970 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.5e-50
Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0

Query: 1   MKSDSSSSPWNNFHTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIG 60
           MKSDSS+SPWNNF  TIF FD DRRNTKELP  ALVLEAGGGAGVGCGLG GFGLVGGIG
Sbjct: 1   MKSDSSNSPWNNF-PTIFCFDQDRRNTKELP--ALVLEAGGGAGVGCGLGIGFGLVGGIG 60

Query: 61  HGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQPSLI 120
           H GASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYG SF+S+DSYFSHL S+PK KQPSLI
Sbjct: 61  HAGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGVSFQSVDSYFSHLISNPKPKQPSLI 119

Query: 121 QF 123
           QF
Sbjct: 121 QF 119

BLAST of MELO3C008164 vs. ExPASy TrEMBL
Match: A0A061EP29 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_019361 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.7e-19
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0

Query: 36  VLEAGGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYG 95
           VL  GGGAG+GCG+G GFGLVGGIG+GG  PWNHL L FG+GAGCGVGLG G GQG GYG
Sbjct: 44  VLGPGGGAGIGCGIGVGFGLVGGIGYGG-WPWNHLKLAFGVGAGCGVGLGFGFGQGIGYG 103

Query: 96  FSFESLDSY 105
           FS ESL+SY
Sbjct: 104 FSLESLESY 111

BLAST of MELO3C008164 vs. ExPASy TrEMBL
Match: A0A7J9EGB8 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_007342 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.7e-19
Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 0

Query: 36  VLEAGGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYG 95
           VL  GGGAG+GCG+G GFGLVGGIG+GG  PWNHL L FG+GAGCG+G+G G GQG GYG
Sbjct: 44  VLGPGGGAGIGCGVGVGFGLVGGIGYGG-WPWNHLKLAFGVGAGCGIGIGFGFGQGIGYG 103

Query: 96  FSFESLDSYFSHLNSDPKHK 116
           FS ESL+S  S  +SD   K
Sbjct: 104 FSLESLESNLSKDSSDSNRK 122

BLAST of MELO3C008164 vs. ExPASy TrEMBL
Match: A0A7N2KWH8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.7e-19
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0

Query: 14  HTTIFSFDHDRRNTKELPALALVLEAGGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLV 73
           H  +  F H+  N K+  A  +VL  GGG G+GCG+G GFGLVGG+G+GG  PWNHL LV
Sbjct: 36  HFPVSKFLHN--NPKK--AEEIVLGPGGGVGIGCGVGLGFGLVGGVGYGG-WPWNHLQLV 95

Query: 74  FGLGAGCGVGLGLGIGQGFGYGFSFESLDSYFSHLNSDPKHKQ 117
            G+G GCGVG+G G GQG GYGFS ESL+SY S  +S    K+
Sbjct: 96  IGIGIGCGVGVGFGYGQGIGYGFSLESLESYLSKQSSSDSKKR 133

BLAST of MELO3C008164 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 0

Query: 40  GGGAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFE 99
           G G G+GCG G G GL GG+G G +   +H ++V G G GCG+G G G G G G G+SF+
Sbjct: 42  GIGGGIGCGAGIGIGLSGGLGIGASEGLDHSNVVLGFGIGCGIGFGFGYGFGVGGGYSFD 101

Query: 100 SLDSYF 106
            +   F
Sbjct: 102 DIKERF 107

BLAST of MELO3C008164 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-08
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 42  GAGVGCGLGFGFGLVGGIGHGGASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESL 101
           G GVGCG GFG GL+GG+G G   P     L FGLG G G G+G+G G G G G +++  
Sbjct: 34  GLGVGCGFGFGAGLIGGVGFGPGVP----GLQFGLGFGAGCGIGVGFGYGVGRGAAYDHS 93

Query: 102 DSYFS 107
            SY++
Sbjct: 94  RSYYN 94

BLAST of MELO3C008164 vs. TAIR 10
Match: AT1G27695.1 (glycine-rich protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 0

Query: 44  GVGCGLGFGFGLVGGIGHG-GASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLD 103
           GVG G GFG G   G+G G G  P N L +  G G GCGVGLGLG G G  +G  + S  
Sbjct: 8   GVGVGFGFGVGCGFGVGWGFGGMPMNILGV--GAGGGCGVGLGLGWGFGTAFGSHYRSSR 67

Query: 104 SYFSHLNSDPKHKQPSLI 121
             F  +  +   K+  ++
Sbjct: 68  LTFQGIELETADKREEVV 83

BLAST of MELO3C008164 vs. TAIR 10
Match: AT1G27695.2 (glycine-rich protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 0

Query: 44  GVGCGLGFGFGLVGGIGHG-GASPWNHLHLVFGLGAGCGVGLGLGIGQGFGYGFSFESLD 103
           GVG G GFG G   G+G G G  P N L +  G G GCGVGLGLG G G  +G  + S  
Sbjct: 8   GVGVGFGFGVGCGFGVGWGFGGMPMNILGV--GAGGGCGVGLGLGWGFGTAFGSHYRSSR 67

Query: 104 SYFSHLNSDPKHKQPSLI 121
             F  +  +   K+  ++
Sbjct: 68  LTFQGIELETADKREEVV 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0051071.11.8e-62100.00fibroin heavy chain [Cucumis melo var. makuwa] >TYK02741.1 fibroin heavy chain [... [more]
KGN63146.11.8e-4987.70hypothetical protein Csa_022245 [Cucumis sativus][more]
KAG6578355.11.2e-3467.65hypothetical protein SDJN03_22803, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF5479947.13.2e-1958.51hypothetical protein F2P56_000728 [Juglans regia][more]
XP_041003309.14.2e-1957.45fibroin heavy chain [Juglans microcarpa x Juglans regia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UC288.8e-63100.00Fibroin heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154... [more]
A0A0A0LSZ28.5e-5087.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404970 PE=4 SV=1[more]
A0A061EP292.7e-1976.81Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_019361 PE=4 SV=1[more]
A0A7J9EGB82.7e-1967.50Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_007342 PE=4 SV=1[more]
A0A7N2KWH82.7e-1956.31Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G66820.11.1e-0946.97glycine-rich protein [more]
AT4G10330.12.7e-0849.23glycine-rich protein [more]
AT1G27695.11.1e-0441.03glycine-rich protein [more]
AT1G27695.21.1e-0441.03glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34201GLYCINE-RICH PROTEINcoord: 32..115
NoneNo IPR availablePANTHERPTHR34201:SF6GLYCINE-RICH PROTEINcoord: 32..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008164.1MELO3C008164.1mRNA