MELO3C008042 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008042
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 7047125 .. 7047379 (-)
RNA-Seq Expression	MELO3C008042
Synteny	MELO3C008042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGATTATGGCTAATGAAATGAAACTTCTCAAGAGTCAATCGCCACGTCTTTTAGAAAAGTATAAACAAACCCAAAAAACTAACCCAAGTTCTTTGTATCGAGCTCAAGTCGAATGGAGGGAGGAAAGATCAGTCTCTACATAA

mRNA sequence

ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGATTATGGCTAATGAAATGAAACTTCTCAAGAGTCAATCGCCACGTCTTTTAGAAAAGTATAAACAAACCCAAAAAACTAACCCAAGTTCTTTGTATCGAGCTCAAGTCGAATGGAGGGAGGAAAGATCAGTCTCTACATAA

Coding sequence (CDS)

ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGATTATGGCTAATGAAATGAAACTTCTCAAGAGTCAATCGCCACGTCTTTTAGAAAAGTATAAACAAACCCAAAAAACTAACCCAAGTTCTTTGTATCGAGCTCAAGTCGAATGGAGGGAGGAAAGATCAGTCTCTACATAA

Protein sequence

MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKIMANEMKLLKSQSPRLLEKYKQTQKTNPSSLYRAQVEWREERSVST

Homology

[Close]

BLAST of MELO3C008042 vs. NCBI nr
Match: KGN48371.1 (hypothetical protein Csa_002960 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 7.2e-18
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKIMANEMKLLKSQSP 53
          MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAK MANEMKLLKSQ P
Sbjct: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLP 52

[Close]

BLAST of MELO3C008042 vs. ExPASy TrEMBL
Match: A0A0A0KKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483510 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKIMANEMKLLKSQSP 53
          MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAK MANEMKLLKSQ P
Sbjct: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLP 52

The following BLAST results are available for this feature:

BLAST of MELO3C008042 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48371.1	7.2e-18	96.15	hypothetical protein Csa_002960 [Cucumis sativus]	[more]

BLAST of MELO3C008042 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKU3	3.5e-18	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483510 PE=4 SV=1	[more]

BLAST of MELO3C008042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008042.1	MELO3C008042.1	mRNA