MELO3C008013.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C008013.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 6666479 .. 6667142 (+)
RNA-Seq ExpressionMELO3C008013.jh1
SyntenyMELO3C008013.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAGAGAAAATGGGAAATTGCATCAACACACACCATTTCCCACCTCTGCAAAAGATCAAAGGTTTCATATGCTGTGAAGTAGAAGGTTTAAACTTGGGATTGCCAATTGGAAACATAGCTGCTTATGGAGCTTGTAAAAGCCAAGCTTTTACAACTTCAAGTGCAGTGGCTGAAGTTGAGCATAGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATAAAAGCAAACTTCCCAAGGCCACCATTGTAGTAAGCAAACAACAACTAGAGTTGATTTTGAGAAAATCCAGAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATAGTTTCAAGGTCGACGATGGCTGCCCCAGATGGCACCCTGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAATTTTGCCTTTTATATTGGAGAAAATTTTATCCATGATGTATTAAATCTGCGTCTAAAGAAAAGGGACTTTTTAGAAACTTTTTTTCAACTAGACAAGGACTAAATAGACTTGTAATTCGTTTGGGAAATTTTGTATAGTTCTTTTTACTGATCGGCTGCTAGAGACGTTTGCTCGGTATCATCATCCCGAATTGATTTTCAACAAGGACTTTTTTTATGGAGAAAGAAGGCATTTTATAC

mRNA sequence

ACAAGAGAAAATGGGAAATTGCATCAACACACACCATTTCCCACCTCTGCAAAAGATCAAAGGTTTCATATGCTGTGAAGTAGAAGGTTTAAACTTGGGATTGCCAATTGGAAACATAGCTGCTTATGGAGCTTGTAAAAGCCAAGCTTTTACAACTTCAAGTGCAGTGGCTGAAGTTGAGCATAGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATAAAAGCAAACTTCCCAAGGCCACCATTGTAGTAAGCAAACAACAACTAGAGTTGATTTTGAGAAAATCCAGAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATAGTTTCAAGGTCGACGATGGCTGCCCCAGATGGCACCCTGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAATTTTGCCTTTTATATTGGAGAAAATTTTATCCATGATGTATTAAATCTGCGTCTAAAGAAAAGGGACTTTTTAGAAACTTTTTTTCAACTAGACAAGGACTAAATAGACTTGTAATTCGTTTGGGAAATTTTGTATAGTTCTTTTTACTGATCGGCTGCTAGAGACGTTTGCTCGGTATCATCATCCCGAATTGATTTTCAACAAGGACTTTTTTTATGGAGAAAGAAGGCATTTTATAC

Coding sequence (CDS)

ATGGGAAATTGCATCAACACACACCATTTCCCACCTCTGCAAAAGATCAAAGGTTTCATATGCTGTGAAGTAGAAGGTTTAAACTTGGGATTGCCAATTGGAAACATAGCTGCTTATGGAGCTTGTAAAAGCCAAGCTTTTACAACTTCAAGTGCAGTGGCTGAAGTTGAGCATAGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATAAAAGCAAACTTCCCAAGGCCACCATTGTAGTAAGCAAACAACAACTAGAGTTGATTTTGAGAAAATCCAGAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATAGTTTCAAGGTCGACGATGGCTGCCCCAGATGGCACCCTGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAA

Protein sequence

MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAEVEHSPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY
Homology
BLAST of MELO3C008013.jh1 vs. NCBI nr
Match: KAA0025575.1 (hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK12450.1 hypothetical protein E5676_scaffold255G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 278 bits (711), Expect = 2.40e-94
Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAEVEHSP 60
           MGNCINTHHFPPLQKIKGFICCEVEGL+LGLPIGN+AAYG CKSQAFTTSSAVAEV+HSP
Sbjct: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAVAEVQHSP 60

Query: 61  PPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFKVDDG 120
           PPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKS+NFGSKGIAVQFSD FKVDDG
Sbjct: 61  PPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVDDG 120

Query: 121 CPRWHPALPTIPEVRNY 137
           CPRWHPALPTIPEVRNY
Sbjct: 121 CPRWHPALPTIPEVRNY 137

BLAST of MELO3C008013.jh1 vs. NCBI nr
Match: KAE8647639.1 (hypothetical protein Csa_004428 [Cucumis sativus])

HSP 1 Score: 238 bits (608), Expect = 2.09e-78
Identity = 120/135 (88.89%), Postives = 122/135 (90.37%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAE--VEH 60
           MGNCINT HFPPLQKIKGFICCEVE LNL LPI NIAA   CK+QAFTTSSAVAE  VEH
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA---CKNQAFTTSSAVAEAEVEH 60

Query: 61  SPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFKVD 120
            PPPLPVRIDHSIVKPAD  KLPK TIVVSKQQLELILRKS+NFGSKGIAVQFSDSFKVD
Sbjct: 61  GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120

Query: 121 DGCPRWHPALPTIPE 133
           DGCPRWHPALPTIPE
Sbjct: 121 DGCPRWHPALPTIPE 132

BLAST of MELO3C008013.jh1 vs. NCBI nr
Match: KAG6603830.1 (hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172 bits (436), Expect = 1.79e-52
Identity = 95/140 (67.86%), Postives = 102/140 (72.86%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAEVEHSP 60
           MGNCINT HF PLQK+K  ICCE E L+L LPI  IA      S A+TTSSAV EV+   
Sbjct: 1   MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA------SGAYTTSSAVLEVDRGA 60

Query: 61  PPLPVRIDH--SIVKPADKSKLPKAT-IVVSKQQLELILRKSRNFGSKGIAVQFSDSFKV 120
           PPLPV ID   ++ KP    KLPK T IVVSKQQLELILR SR F SKGIAVQFSDSF+V
Sbjct: 61  PPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEV 120

Query: 121 DDGCPRWHPALPTIPEVRNY 137
           DD CPRW PALPTI EV NY
Sbjct: 121 DDRCPRWCPALPTILEVHNY 134

BLAST of MELO3C008013.jh1 vs. NCBI nr
Match: KAG6594706.1 (hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (258), Expect = 1.16e-25
Identity = 67/141 (47.52%), Postives = 78/141 (55.32%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAEVEH-- 60
           MGNCI++ H                  +L +P+  IA            +SAV EV    
Sbjct: 1   MGNCISSPHL----------------YDLAVPVEKIAG--------LKLTSAVLEVGRGA 60

Query: 61  SPPPLPVRIDHS--IVKPADKSKLPKATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFK 120
           + PP  V ID    I KPA   KLPKATIVVSK+QLE +L  S+ FGS+GIAVQFSDSFK
Sbjct: 61  ATPPAHVLIDDDDDITKPAALCKLPKATIVVSKEQLEFLLTNSQQFGSQGIAVQFSDSFK 117

Query: 121 VDDGCPRWHPALPTIPEVRNY 137
            D  C RW P LPTI EV NY
Sbjct: 121 FDRSCSRWCPVLPTILEVHNY 117

BLAST of MELO3C008013.jh1 vs. NCBI nr
Match: KAF9851460.1 (hypothetical protein H0E87_015599 [Populus deltoides])

HSP 1 Score: 70.5 bits (171), Expect = 3.24e-12
Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFI----------CCEVEGLNLGLPIGNIAAYGACKSQAFTTS 60
           MGNCI+   +   ++ K  I             V+ +  G   G +  + A         
Sbjct: 1   MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVQKITSGRYGGYMLVHSALPYVPLPPD 60

Query: 61  SAV--AEVEHSPPPL--PVRID-HSIVKPADKSKLPKATIVVSKQQLELILRKSRNFGSK 120
           + +   EV H  P L  P R++  S +   +     K  IVV++QQLEL+LR S+ F SK
Sbjct: 61  TRLEPGEVYHLMPSLGQPCRLEVSSKLAGQETCASRKVKIVVTRQQLELLLRNSKQFRSK 120

Query: 121 GIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY 137
           GIAV+FS+SFK  +G  +W P+L TIPEVR +
Sbjct: 121 GIAVRFSESFK--EGERKWRPSLVTIPEVRKF 150

BLAST of MELO3C008013.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00250 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 1.16e-94
Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAEVEHSP 60
           MGNCINTHHFPPLQKIKGFICCEVEGL+LGLPIGN+AAYG CKSQAFTTSSAVAEV+HSP
Sbjct: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAVAEVQHSP 60

Query: 61  PPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFKVDDG 120
           PPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKS+NFGSKGIAVQFSD FKVDDG
Sbjct: 61  PPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVDDG 120

Query: 121 CPRWHPALPTIPEVRNY 137
           CPRWHPALPTIPEVRNY
Sbjct: 121 CPRWHPALPTIPEVRNY 137

BLAST of MELO3C008013.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1)

HSP 1 Score: 248 bits (632), Expect = 1.26e-82
Identity = 124/139 (89.21%), Postives = 126/139 (90.65%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLNLGLPIGNIAAYGACKSQAFTTSSAVAE--VEH 60
           MGNCINT HFPPLQKIKGFICCEVE LNL LPI NIAA   CK+QAFTTSSAVAE  VEH
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA---CKNQAFTTSSAVAEAEVEH 60

Query: 61  SPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFKVD 120
            PPPLPVRIDHSIVKPAD  KLPK TIVVSKQQLELILRKS+NFGSKGIAVQFSDSFKVD
Sbjct: 61  GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120

Query: 121 DGCPRWHPALPTIPEVRNY 137
           DGCPRWHPALPTIPEVRNY
Sbjct: 121 DGCPRWHPALPTIPEVRNY 136

BLAST of MELO3C008013.jh1 vs. ExPASy TrEMBL
Match: B9HD50 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.39e-11
Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 82  KATIVVSKQQLELILRKSRNFGSKGIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY 137
           K  IVV++QQLEL+LR S+ F SKGIAV+FS+SFK  +G  +W P+L TIPEV+ +
Sbjct: 97  KVKIVVTRQQLELLLRNSKQFRSKGIAVRFSESFK--EGERKWRPSLVTIPEVQKF 150

BLAST of MELO3C008013.jh1 vs. ExPASy TrEMBL
Match: A0A5N5M953 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.47e-09
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 55  EVEHSPPPL--PVRIDHSIVKPADKSKLP-KATIVVSKQQLELILRKSRNFGSKGIAVQF 114
           EV H  PPL  P R++ S      ++    K  IVV++QQLEL+LR S+    +GIAVQF
Sbjct: 67  EVYHLMPPLDQPSRLEVSSKLTGQEACAGRKVKIVVTRQQLELLLRNSKQLKLRGIAVQF 126

Query: 115 SDSFKVDDGCPRWHPALPTIPEV 134
           S+SFK  +G  +W P+L TIPEV
Sbjct: 127 SESFK--EGKRKWQPSLVTIPEV 147

BLAST of MELO3C008013.jh1 vs. ExPASy TrEMBL
Match: A0A5N6Q7Y4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000047 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.90e-09
Identity = 52/153 (33.99%), Postives = 72/153 (47.06%), Query Frame = 0

Query: 1   MGNCINTHHFPPLQKI---------KGFICCE-VEGLNLGLPIGNIAAYGACKSQAFTTS 60
           MGNCI+    PP +KI         K FI    VE +  G   G    + A        +
Sbjct: 31  MGNCIDVLLHPPEEKIRVLIFNGGEKEFIASTPVEKITCGPYNGFKLVHHAQPYSPLAPN 90

Query: 61  SAV--AEVEHSPPPLPVRIDHSIVKPA---DKSKLPKATIVVSKQQLELILRKSRNFGSK 120
           + +   EV +  P  P     S+       D  K  K  IVV+K+QLEL+LR ++ F S 
Sbjct: 91  TRLEPGEVYYLVPLQPQPHHPSVTSRTANHDTGKRRKVKIVVTKEQLELLLRSTKKFQSS 150

Query: 121 GIAVQFSDSFKVD-DGCPRWHPALPTIPEVRNY 137
            IA Q   S +VD +GC +W P+L TI EV ++
Sbjct: 151 VIAGQILGSSQVDVEGCRKWQPSLATIHEVHSF 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0025575.12.40e-9495.62hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK1245... [more]
KAE8647639.12.09e-7888.89hypothetical protein Csa_004428 [Cucumis sativus][more]
KAG6603830.11.79e-5267.86hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6594706.11.16e-2547.52hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF9851460.13.24e-1234.87hypothetical protein H0E87_015599 [Populus deltoides][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CLY81.16e-9495.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KHP31.26e-8289.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1[more]
B9HD503.39e-1158.93Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 ... [more]
A0A5N5M9533.47e-0948.19Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1[more]
A0A5N6Q7Y49.90e-0933.99Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000047 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33148:SF50SUBFAMILY NOT NAMEDcoord: 1..136
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008013.jh1.t1MELO3C008013.jh1.t1mRNA