MELO3C007907 (gene) Melon (DHL92) v4

Overview


Name	MELO3C007907
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-type domain-containing protein
Location	chr08: 6133631 .. 6134203 (+)
RNA-Seq Expression	MELO3C007907
Synteny	MELO3C007907

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCAGTGGATGATCTCGGTTACAGCAATAGACGCCTTCTTAAAGATTCTTCCTTATTTGAACAACCATTTGGAAACCGAGAAAGAATTGTTACTATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTTTTCACCTGCTTTCGGCGCCAACTCAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGCGATTCGTCTTCAAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCGGAGTTTGAGTATGGAGATGAACTCCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCACTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCCTTTGTTCAAACTATTGGGCCCGAAATCCTGCCTTCATATTGGCCTTCGGCCTCGGTAGTAATGCCCCACTGCCCTCTCAATTGTAA

mRNA sequence

ATGAATTCAGTGGATGATCTCGGTTACAGCAATAGACGCCTTCTTAAAGATTCTTCCTTATTTGAACAACCATTTGGAAACCGAGAAAGAATTGTTACTATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTTTTCACCTGCTTTCGGCGCCAACTCAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGCGATTCGTCTTCAAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCGGAGTTTGAGTATGGAGATGAACTCCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCACTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCCTTTGTTCAAACTATTGGGCCCGAAATCCTGCCTTCATATTGGCCTTCGGCCTCGGTAGTAATGCCCCACTGCCCTCTCAATTGTAA

Coding sequence (CDS)

ATGAATTCAGTGGATGATCTCGGTTACAGCAATAGACGCCTTCTTAAAGATTCTTCCTTATTTGAACAACCATTTGGAAACCGAGAAAGAATTGTTACTATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTTTTCACCTGCTTTCGGCGCCAACTCAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGCGATTCGTCTTCAAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCGGAGTTTGAGTATGGAGATGAACTCCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCACTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCCTTTGTTCAAACTATTGGGCCCGAAATCCTGCCTTCATATTGGCCTTCGGCCTCGGTAGTAATGCCCCACTGCCCTCTCAATTGTAA

Protein sequence

MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGLGSNAPLPSQL

Homology

[Close]

BLAST of MELO3C007907 vs. NCBI nr
Match: KAA0025673.1 (RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa] >TYK12545.1 RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 9.3e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL
Sbjct: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 181 GSNAPLPSQL 190

[Close]

BLAST of MELO3C007907 vs. NCBI nr
Match: XP_008440820.1 (PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 9.3e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 11  MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 70

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 71  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 130

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL
Sbjct: 131 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 190

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 191 GSNAPLPSQL 200

[Close]

BLAST of MELO3C007907 vs. NCBI nr
Match: XP_011658497.1 (E3 ubiquitin-protein ligase RHA2B [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKD SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 1   MNSVDDLGYSNRRLLKD-SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESR CVICLAEFEYGDELR
Sbjct: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRTCVICLAEFEYGDELR 120

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYW+RNPAFILAFGL
Sbjct: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWSRNPAFILAFGL 180

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 181 GSNAPLPSQL 189

[Close]

BLAST of MELO3C007907 vs. NCBI nr
Match: XP_038881295.1 (RING-H2 finger protein ATL79-like [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 4.0e-85
Identity = 164/191 (85.86%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVD LGYS RRLLKD SLFE PFGNRERIVTICATS IAA+FVISLFISLFTCFR QL
Sbjct: 1   MNSVDYLGYSYRRLLKD-SLFEHPFGNRERIVTICATSVIAAMFVISLFISLFTCFRHQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT-SFESRNCVICLAEFEYGDEL 120
           NSPSSKP  ST SSQ LTTMPVYIYGD SS+  SSYCFT SFE RNCVICLAEF++GDEL
Sbjct: 61  NSPSSKPPPSTSSSQ-LTTMPVYIYGDVSSSPSSSYCFTSSFEPRNCVICLAEFKHGDEL 120

Query: 121 RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFG 180
           RVLPNCKH FHKGCIDQWL LRSLLCPLCR+HT +EI TMRRP+CSNYWARNPAFILAFG
Sbjct: 121 RVLPNCKHAFHKGCIDQWLLLRSLLCPLCRDHTTEEIGTMRRPICSNYWARNPAFILAFG 180

Query: 181 LGSNAPLPSQL 191
           LGSN PLPSQL
Sbjct: 181 LGSNVPLPSQL 189

[Close]

BLAST of MELO3C007907 vs. NCBI nr
Match: KAG6603909.1 (RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 6.1e-73
Identity = 144/193 (74.61%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNS    GY+ RRLLKD SL ++PFG+ ER+VTIC  SAIAA FV+SLFISLFTCFRRQL
Sbjct: 1   MNSAQAPGYTYRRLLKD-SLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT---SFESRNCVICLAEFEYGD 120
            S SSKP SSTCS Q L++MPVYIYGDS     + YCFT   SFE+RNCVICLAEFE GD
Sbjct: 61  TSASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSSFEARNCVICLAEFELGD 120

Query: 121 ELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILA 180
           ELRVLPNCKH FHKGCIDQWLPLRSLLCPLCRE +I EI TMR+P+C+N+WARNPAF+LA
Sbjct: 121 ELRVLPNCKHAFHKGCIDQWLPLRSLLCPLCRELSIDEIGTMRKPVCTNHWARNPAFVLA 180

Query: 181 FGLGSNAPLPSQL 191
           F   SNAPLPSQL
Sbjct: 181 FASASNAPLPSQL 186

[Close]

BLAST of MELO3C007907 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 57  RRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYG 116
           R  L + S+ P        +L  +P+++Y  SS N P        E   C +CL+EFE  
Sbjct: 66  RSHLRTLSASPRDQALDQAVLDKIPIFVY--SSKNPPPPE-----EKEECSVCLSEFEEE 125

Query: 117 DELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCR 150
           DE R+LP C H FH  CID W   RS  CPLCR
Sbjct: 126 DEGRLLPKCGHSFHVDCIDTWFRSRS-TCPLCR 150

[Close]

BLAST of MELO3C007907 vs. ExPASy Swiss-Prot
Match: Q9SJJ7 (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-11
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 74  SQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGC 133
           SQ + ++PVY Y  ++             + +CVICL++FE G+ ++V+P+C HVFH  C
Sbjct: 118 SQAVRSLPVYRYTKAAKQ----------RNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 177

Query: 134 IDQWLPLRSLLCPLCREHTI 154
           +D WL    + CPLCR + +
Sbjct: 178 VDTWLS-SYVTCPLCRSNQL 186

[Close]

BLAST of MELO3C007907 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           +S S  PL  T    +L  +P+++Y   +   P            C +CL+EFE  DE R
Sbjct: 81  SSSSLSPLDPT----VLEKIPIFVYSVKTHESP---------LEECSVCLSEFEEDDEGR 140

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCR 150
           VLP C HVFH  CID W   RS  CPLCR
Sbjct: 141 VLPKCGHVFHVDCIDTWFRSRS-SCPLCR 155

[Close]

BLAST of MELO3C007907 vs. ExPASy Swiss-Prot
Match: Q8H7N9 (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 44/135 (32.59%), Postives = 58/135 (42.96%), Query Frame = 0


Query: 33  TICATSAIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQ----------------- 92
           T+    A+   FV+    S+      Q  +P  +   ST S Q                 
Sbjct: 47  TVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASRGLDK 106

Query: 93  -LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCI 150
            ++   P  +YGD  + M +           C +CLAEF   DELRVLP C HVFH  CI
Sbjct: 107 EVVEAFPTAVYGDVKARMAA-----KSGPLECAVCLAEFADSDELRVLPACCHVFHPDCI 166

[Close]

BLAST of MELO3C007907 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 76  LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCID 135
           L+  +PV++Y +              E  +C +CL EF   D+LR+LPNC H FH  CID
Sbjct: 123 LIDALPVFLYKEIKGTK---------EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCID 182

Query: 136 QWLPLRSLLCPLCR 150
            WL L +  CPLCR
Sbjct: 183 TWL-LSNSTCPLCR 186

[Close]

BLAST of MELO3C007907 vs. ExPASy TrEMBL
Match: A0A5D3CLV8 (RING-H2 finger protein ATL72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001270 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.5e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL
Sbjct: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 181 GSNAPLPSQL 190

[Close]

BLAST of MELO3C007907 vs. ExPASy TrEMBL
Match: A0A1S3B2S4 (RING-H2 finger protein ATL72-like OS=Cucumis melo OX=3656 GN=LOC103485128 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.5e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 11  MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 70

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 71  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 130

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL
Sbjct: 131 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 190

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 191 GSNAPLPSQL 200

[Close]

BLAST of MELO3C007907 vs. ExPASy TrEMBL
Match: A0A0A0KKP7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505940 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 7.9e-103
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKD SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 24  MNSVDDLGYSNRRLLKD-SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 83

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESR CVICLAEFEYGDELR
Sbjct: 84  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRTCVICLAEFEYGDELR 143

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYW+RNPAFILAFGL
Sbjct: 144 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWSRNPAFILAFGL 203

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 204 GSNAPLPSQL 212

[Close]

BLAST of MELO3C007907 vs. ExPASy TrEMBL
Match: A0A6J1GEN4 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111453465 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.8e-73
Identity = 144/193 (74.61%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNS    GY+ RRLLKD SL ++PFG+ ER+VTIC  SAIAA FV+SLFISLFTCFRRQL
Sbjct: 1   MNSAQAPGYTYRRLLKD-SLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT---SFESRNCVICLAEFEYGD 120
            S SSKP SSTCS Q L++MPVYIYGDS     + YCFT   SFE+RNCVICLAEFE GD
Sbjct: 61  TSASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSSFEARNCVICLAEFELGD 120

Query: 121 ELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILA 180
           ELRVLPNCKH FHKGCIDQWLPLRSLLCPLCRE +I EI TMR+P+C+N+WARNPAF+LA
Sbjct: 121 ELRVLPNCKHAFHKGCIDQWLPLRSLLCPLCRELSIDEIGTMRKPVCTNHWARNPAFVLA 180

Query: 181 FGLGSNAPLPSQL 191
           F   SNAPLPSQL
Sbjct: 181 FAPASNAPLPSQL 186

[Close]

BLAST of MELO3C007907 vs. ExPASy TrEMBL
Match: A0A6J1IJG4 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111477647 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.2e-72
Identity = 142/192 (73.96%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNS    GY+ RRLLKD SL ++PFG+ ER+VTIC  SAIAA FV+SLFISLFTCFRRQL
Sbjct: 1   MNSAQAPGYTYRRLLKD-SLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT--SFESRNCVICLAEFEYGDE 120
            S SSKP SSTCS Q L++MPVYIYGDS     + YCFT  SFE RNCVICL EFE GDE
Sbjct: 61  TSASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSFEVRNCVICLGEFELGDE 120

Query: 121 LRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAF 180
           LRVLPNC H FHKGCIDQWLPLRSLLCPLCRE +  EI TMR+P+C+NYWARNPAF+LAF
Sbjct: 121 LRVLPNCNHAFHKGCIDQWLPLRSLLCPLCRELSTDEIGTMRKPVCTNYWARNPAFVLAF 180

Query: 181 GLGSNAPLPSQL 191
              SNAPLPSQL
Sbjct: 181 APASNAPLPSQL 185

[Close]

BLAST of MELO3C007907 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 57  RRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYG 116
           R  L + S+ P        +L  +P+++Y  SS N P        E   C +CL+EFE  
Sbjct: 66  RSHLRTLSASPRDQALDQAVLDKIPIFVY--SSKNPPPPE-----EKEECSVCLSEFEEE 125

Query: 117 DELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCR 150
           DE R+LP C H FH  CID W   RS  CPLCR
Sbjct: 126 DEGRLLPKCGHSFHVDCIDTWFRSRS-TCPLCR 150

[Close]

BLAST of MELO3C007907 vs. TAIR 10
Match: AT1G63840.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-12
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 80  MPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQW-L 139
           +PV  + D   N P S C        C +CL +FE  DE+R L NC+H+FH+GC+D+W +
Sbjct: 73  LPVVRFSD--INRPESEC--------CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMM 132

Query: 140 PLRSLLCPLCREHTIKE 156
               + CPLCR   I +
Sbjct: 133 GYNQMTCPLCRTQFIPD 139

[Close]

BLAST of MELO3C007907 vs. TAIR 10
Match: AT2G27940.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 6.4e-12
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 74  SQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGC 133
           SQ + ++PVY Y  ++             + +CVICL++FE G+ ++V+P+C HVFH  C
Sbjct: 118 SQAVRSLPVYRYTKAAKQ----------RNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 177

Query: 134 IDQWLPLRSLLCPLCREHTI 154
           +D WL    + CPLCR + +
Sbjct: 178 VDTWLS-SYVTCPLCRSNQL 186

[Close]

BLAST of MELO3C007907 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 68.2 bits (165), Expect = 8.3e-12
Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           +S S  PL  T    +L  +P+++Y   +   P            C +CL+EFE  DE R
Sbjct: 81  SSSSLSPLDPT----VLEKIPIFVYSVKTHESP---------LEECSVCLSEFEEDDEGR 140

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCR 150
           VLP C HVFH  CID W   RS  CPLCR
Sbjct: 141 VLPKCGHVFHVDCIDTWFRSRS-SCPLCR 155

[Close]

BLAST of MELO3C007907 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 76  LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCID 135
           L+  +PV++Y +              E  +C +CL EF   D+LR+LPNC H FH  CID
Sbjct: 123 LIDALPVFLYKEIKGTK---------EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCID 182

Query: 136 QWLPLRSLLCPLCR 150
            WL L +  CPLCR
Sbjct: 183 TWL-LSNSTCPLCR 186

The following BLAST results are available for this feature:

BLAST of MELO3C007907 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025673.1	9.3e-106	100.00	RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa] >TYK12545.1 RING-H2...	[more]
XP_008440820.1	9.3e-106	100.00	PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo]	[more]
XP_011658497.1	1.6e-102	97.89	E3 ubiquitin-protein ligase RHA2B [Cucumis sativus]	[more]
XP_038881295.1	4.0e-85	85.86	RING-H2 finger protein ATL79-like [Benincasa hispida]	[more]
KAG6603909.1	6.1e-73	74.61	RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C007907 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22255	1.8e-11	40.86	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9SJJ7	9.0e-11	37.50	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1	[more]
Q9LZJ6	1.2e-10	41.57	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8H7N9	2.0e-10	32.59	E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q8GW38	2.0e-10	41.89	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]

BLAST of MELO3C007907 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV8	4.5e-106	100.00	RING-H2 finger protein ATL72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B2S4	4.5e-106	100.00	RING-H2 finger protein ATL72-like OS=Cucumis melo OX=3656 GN=LOC103485128 PE=4 S...	[more]
A0A0A0KKP7	7.9e-103	97.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505940 P...	[more]
A0A6J1GEN4	3.8e-73	74.61	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111453465 ...	[more]
A0A6J1IJG4	7.2e-72	73.96	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111477647 PE...	[more]

BLAST of MELO3C007907 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47560.1	1.3e-12	40.86	RING/U-box superfamily protein	[more]
AT1G63840.1	4.9e-12	40.26	RING/U-box superfamily protein	[more]
AT2G27940.1	6.4e-12	37.50	RING/U-box superfamily protein	[more]
AT3G62690.1	8.3e-12	41.57	AtL5	[more]
AT1G23980.1	1.4e-11	41.89	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 106..148 e-value: 1.4E-7 score: 41.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 105..149 e-value: 6.3E-13 score: 48.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 106..149 score: 12.031935
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 101..153 e-value: 6.3E-18 score: 66.1
None	No IPR available	PANTHER	PTHR45798:SF35	OS11G0149500 PROTEIN	coord: 2..187
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 2..187
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 105..149 e-value: 3.35533E-16 score: 67.2517
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 105..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007907.1	MELO3C007907.1	mRNA