MELO3C007840 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAAAATGTGGAAATGAAGCACGTGCCCGGCTGTATCTTGTTGATTATAAAATAACTTAAAGAAAAGTCGAAGAAAGTGGTGGGTGAGCCCACCTTCCTAAAGCATGCACATAATTTGTTGTGTGTATAAGAAAGATTCCAAAAATATTATAATAATTAGGTTAAATCTTTATTTCTTGAGGGTAGTTGGGAAAAGCAGGATAAAGTCAATCTGTTGGAACGTATGTCGAGCTTGCATAACATTTGGCAAGCCAATATTGACCATTTGAAACCCATAAATCTACAACCTATTCTCCACAAATCTCTCACAAGCAACCCTCTTCACTTTCCCTTCTCCATTATTGAGCAAGAGCCATTCCCGTCCTCTTGCTAAAACTTGCTTGTGCTCTTAACTTTACTTGTTAACAATGTTGAGAGCTTTGAGTACCAGGAGATGCCCTCACAGGTACAAGTTCCTCGCGGAGGATCCTACCATTAGCTTGTTGGAAGGAAAGCTGAGGAGGGCAACCAGTTTGCCAACCATAGTACTTGGTTCTGGATCGAGGAAATCGGCCTTTGACATTACAGTCCCCGAGTTTGCTCAAGCAAAACAGAAGCAGTCAAAGAGAGCTAACAAAGGAGGACACCCTATTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCGACAGCCAGGCCTGAATTTGCAAGGTATCTAGAGTATTTGAAGGAAGGAGGACTATGGGATTTGAAAGCAAATGCTCCTGTCATCTACTTTAAATGATTTAATTCATATTTGTTTGTTCTTCTTCCACTTATATACATGTCAATGGAAAGATATTTGGTTTTAAGTTGTAAAAGGAAGATTGAAATTATCAGCAATCTTCTATCCGAATTCTTCCACCCCTTAGAATATATTACAAAGCTTTGAGGTTAAAGATCGAGTTGCCTCTGATCTTACCCTTATAAATAAAAATGATTTGTTTCTTGACCTTGGCTTATAATATTCACCATCA TTTAAAAATGTGGAAATGAAGCACGTGCCCGGCTGTATCTTGTTGATTATAAAATAACTTAAAGAAAAGTCGAAGAAAGTGGTGGGTGAGCCCACCTTCCTAAAGCATGCACATAATTTGTTGTGTGTATAAGAAAGATTCCAAAAATATTATAATAATTAGGTTAAATCTTTATTTCTTGAGGGTAGTTGGGAAAAGCAGGATAAAGTCAATCTGTTGGAACGTATGTCGAGCTTGCATAACATTTGGCAAGCCAATATTGACCATTTGAAACCCATAAATCTACAACCTATTCTCCACAAATCTCTCACAAGCAACCCTCTTCACTTTCCCTTCTCCATTATTGAGCAAGAGCCATTCCCGTCCTCTTGCTAAAACTTGCTTGTGCTCTTAACTTTACTTGTTAACAATGTTGAGAGCTTTGAGTACCAGGAGATGCCCTCACAGGTACAAGTTCCTCGCGGAGGATCCTACCATTAGCTTGTTGGAAGGAAAGCTGAGGAGGGCAACCAGTTTGCCAACCATAGTACTTGGTTCTGGATCGAGGAAATCGGCCTTTGACATTACAGTCCCCGAGTTTGCTCAAGCAAAACAGAAGCAGTCAAAGAGAGCTAACAAAGGAGGACACCCTATTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCGACAGCCAGGCCTGAATTTGCAAGGTATCTAGAGTATTTGAAGGAAGGAGGACTATGGGATTTGAAAGCAAATGCTCCTGTCATCTACTTTAAATGATTTAATTCATATTTGTTTGTTCTTCTTCCACTTATATACATGTCAATGGAAAGATATTTGGTTTTAAGTTGTAAAAGGAAGATTGAAATTATCAGCAATCTTCTATCCGAATTCTTCCACCCCTTAGAATATATTACAAAGCTTTGAGGTTAAAGATCGAGTTGCCTCTGATCTTACCCTTATAAATAAAAATGATTTGTTTCTTGACCTTGGCTTATAATATTCACCATCA ATGTTGAGAGCTTTGAGTACCAGGAGATGCCCTCACAGGTACAAGTTCCTCGCGGAGGATCCTACCATTAGCTTGTTGGAAGGAAAGCTGAGGAGGGCAACCAGTTTGCCAACCATAGTACTTGGTTCTGGATCGAGGAAATCGGCCTTTGACATTACAGTCCCCGAGTTTGCTCAAGCAAAACAGAAGCAGTCAAAGAGAGCTAACAAAGGAGGACACCCTATTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCGACAGCCAGGCCTGAATTTGCAAGGTATCTAGAGTATTTGAAGGAAGGAGGACTATGGGATTTGAAAGCAAATGCTCCTGTCATCTACTTTAAATGA MLRALSTRRCPHRYKFLAEDPTISLLEGKLRRATSLPTIVLGSGSRKSAFDITVPEFAQAKQKQSKRANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK Homology
BLAST of MELO3C007840 vs. NCBI nr
Match: XP_008440743.1 (PREDICTED: uncharacterized protein LOC103485064 [Cucumis melo]) HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MELO3C007840 vs. NCBI nr
Match: KAA0036214.1 (auxilin-like protein 1 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of MELO3C007840 vs. NCBI nr
Match: TYK12611.1 (auxilin-like protein 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of MELO3C007840 vs. NCBI nr
Match: XP_011658493.1 (uncharacterized protein LOC105436031 [Cucumis sativus]) HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56 Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of MELO3C007840 vs. NCBI nr
Match: KAE8647591.1 (hypothetical protein Csa_003995 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53 Identity = 105/113 (92.92%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of MELO3C007840 vs. ExPASy TrEMBL
Match: A0A1S3B2K9 (uncharacterized protein LOC103485064 OS=Cucumis melo OX=3656 GN=LOC103485064 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MELO3C007840 vs. ExPASy TrEMBL
Match: A0A5D3CLB7 (Auxilin-like protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001970 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.1e-57 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of MELO3C007840 vs. ExPASy TrEMBL
Match: A0A5A7SY54 (Auxilin-like protein 1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00110 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.1e-57 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of MELO3C007840 vs. ExPASy TrEMBL
Match: A0A0A0KKF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502830 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56 Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of MELO3C007840 vs. ExPASy TrEMBL
Match: A0A6J1BSU6 (uncharacterized protein LOC111005403 OS=Momordica charantia OX=3673 GN=LOC111005403 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44 Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of MELO3C007840 vs. TAIR 10
Match: AT4G36500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 111.3 bits (277), Expect = 5.3e-25 Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of MELO3C007840 vs. TAIR 10
Match: AT2G18210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22 Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of MELO3C007840 vs. TAIR 10
Match: AT3G50900.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits to 45 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16 Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of MELO3C007840 vs. TAIR 10
Match: AT5G66490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 6.5e-15 Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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