MELO3C007786.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C007786.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 5271497 .. 5272703 (-)
RNA-Seq ExpressionMELO3C007786.jh1
SyntenyMELO3C007786.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAGAAATCCATTTTATTTGGTATTGGCACAATCAAAGAAGACCCTTCAATAAAATATACATATGGTGTATGTATATTTTATAGATAGGATACTTTAATTTGATATATAATACAATCAATTTCTCCACAAAGGGTCCACCCGTAGAAAAAGTAAAACCAAAATGCCCAAGAAAACCAGACTAAGTCATCAAAGATCACTTTTTTATTTCTTTTATACACTACACCGACTTGTCAGCCTTATCCACAATCATACCTCAATCTGAATATAAATTATGTCGGCCTCCTAAAGGGGTCTTCTCAAAATCAACTAAGGAGCATTGAAAAATCACAGCCATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACGAAGCATCCAAGGCGAGATCAAGAGATGGTCAGGCAAGAGCTTCAAGATTTGGGTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTACGATGAAGAAGATGATGGAAATGGCGAAAAGACATAATTACTCTGCCGAGATATCGGAATTCAATCGGGTTTTTGAACCCAAATCTCAAATTGGCCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGAGTTCCTCTGTTCTTGAAATTGGGTTCATATATTGTAAATGTTTCTCATCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCAAATCTGTACATGTTTTTTCTTTTTCTTTTTCTTTTTTCTTCTTTTTTTGGATTCCATTAGTTTTGAAATTAAATGCTTTTGAATTCGAGAGAAGAAAGGTGGGATTGTATTATGATTTGATGATTATTAACCATATGAATGTTGGGAAAAGAATGGGTGATTTGGTTTTCAAGAAATGATTGGGAGTTCGTCACAGGGGTGTGTTTAATTTTTAGTTGTTCTTGAAACATAAAGCTTAATCTTAATGTTTATGCTTTGGGATCAATCCACCATTTAAAATGGTATCAGTAATAATAATATTTGATATTAAATCGTAGACAAAATTTTAAATAAAGTGATTATTTATATACCCATTTTGAAGTGAGAAATAATTAATTTTTCAAACATATTGTTGGCCTCTACACAAACTCTCATAGCTTTATGTTTTTGTATCACCCCATGAGCTTTTATATTAATAATATAATTATTTGTATGATCTCTCTTTATTTGATTGATAATAGTTATGAAATTTTGGTCGCATTCTAA

mRNA sequence

ACCAAGAAATCCATTTTATTTGGTATTGGCACAATCAAAGAAGACCCTTCAATAAAATATACATATGGTGTATGTATATTTTATAGATAGGATACTTTAATTTGATATATAATACAATCAATTTCTCCACAAAGGGTCCACCCGTAGAAAAAGTAAAACCAAAATGCCCAAGAAAACCAGACTAAGTCATCAAAGATCACTTTTTTATTTCTTTTATACACTACACCGACTTGTCAGCCTTATCCACAATCATACCTCAATCTGAATATAAATTATGTCGGCCTCCTAAAGGGGTCTTCTCAAAATCAACTAAGGAGCATTGAAAAATCACAGCCATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACGAAGCATCCAAGGCGAGATCAAGAGATGGTCAGGCAAGAGCTTCAAGATTTGGGTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTACGATGAAGAAGATGATGGAAATGGCGAAAAGACATAATTACTCTGCCGAGATATCGGAATTCAATCGGGTTTTTGAACCCAAATCTCAAATTGGCCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGAGTTCCTCTGTTCTTGAAATTGGGTTCATATATTGTAAATGTTTCTCATCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCAAATCTGTACATGTTTTTTCTTTTTCTTTTTCTTTTTTCTTCTTTTTTTGGATTCCATTAGTTTTGAAATTAAATGCTTTTGAATTCGAGAGAAGAAAGGTGGGATTGTATTATGATTTGATGATTATTAACCATATGAATGTTGGGAAAAGAATGGGTGATTTGGTTTTCAAGAAATGATTGGGAGTTCGTCACAGGGGTGTGTTTAATTTTTAGTTGTTCTTGAAACATAAAGCTTAATCTTAATGTTTATGCTTTGGGATCAATCCACCATTTAAAATGGTATCAGTAATAATAATATTTGATATTAAATCGTAGACAAAATTTTAAATAAAGTGATTATTTATATACCCATTTTGAAGTGAGAAATAATTAATTTTTCAAACATATTGTTGGCCTCTACACAAACTCTCATAGCTTTATGTTTTTGTATCACCCCATGAGCTTTTATATTAATAATATAATTATTTGTATGATCTCTCTTTATTTGATTGATAATAGTTATGAAATTTTGGTCGCATTCTAA

Coding sequence (CDS)

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACGAAGCATCCAAGGCGAGATCAAGAGATGGTCAGGCAAGAGCTTCAAGATTTGGGTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTACGATGAAGAAGATGATGGAAATGGCGAAAAGACATAATTACTCTGCCGAGATATCGGAATTCAATCGGGTTTTTGAACCCAAATCTCAAATTGGCCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGA

Protein sequence

MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNYSAEISEFNRVFEPKSQIGRAASTGFFSA
Homology
BLAST of MELO3C007786.jh1 vs. NCBI nr
Match: XP_016899241.1 (PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo] >KAA0036271.1 uncharacterized protein E6C27_scaffold18G00700 [Cucumis melo var. makuwa] >TYK12665.1 uncharacterized protein E5676_scaffold255G002530 [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (421), Expect = 1.13e-51
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKR+NY
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
          SAEISEFNRVFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of MELO3C007786.jh1 vs. NCBI nr
Match: XP_011657992.1 (uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical protein Csa_003490 [Cucumis sativus])

HSP 1 Score: 149 bits (377), Expect = 6.04e-45
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGS-GVSISATATSITMKKMMEMAKRHN 60
          MADIAILVAEEYERRTK+PRR QEM+RQELQ+LGS GVSISATATSI MKKMMEMAK+HN
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 88
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of MELO3C007786.jh1 vs. NCBI nr
Match: XP_038882836.1 (uncharacterized protein LOC120073972 [Benincasa hispida])

HSP 1 Score: 119 bits (297), Expect = 8.03e-33
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERR K+P + QE  +QELQDL SGVSISATATSI MKKMMEMAK+++ 
Sbjct: 1  MADIAILVAEEYERRMKNPTQVQE--KQELQDLASGVSISATATSIRMKKMMEMAKQNS- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
            +ISEF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 --QISEFKWVFEPKSQIGRAASTGFFSA 83

BLAST of MELO3C007786.jh1 vs. NCBI nr
Match: KAG6604012.1 (hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034176.1 hypothetical protein SDJN02_03903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110 bits (275), Expect = 1.81e-29
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERR K+PR+ QE   Q+L+DL SGVSISATA++I MKKMME+A ++  
Sbjct: 1  MADIAILVAEEYERRMKNPRQAQET--QKLEDLSSGVSISATASAIRMKKMMEIAIQN-- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
           AE++EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 -AEMTEFKWVFEPKSQIGRAASTGFFSA 83

BLAST of MELO3C007786.jh1 vs. NCBI nr
Match: KAG6594853.1 (hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 98.6 bits (244), Expect = 9.31e-25
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERRTK+PR++Q+    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAA-EVQDLVSGVSISATASRV--KKMMELELE--- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
           A+ +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 LAQPNEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MELO3C007786.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 5.49e-52
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKR+NY
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
          SAEISEFNRVFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of MELO3C007786.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DTC5 (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 5.49e-52
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKR+NY
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
          SAEISEFNRVFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of MELO3C007786.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 2.92e-45
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGS-GVSISATATSITMKKMMEMAKRHN 60
          MADIAILVAEEYERRTK+PRR QEM+RQELQ+LGS GVSISATATSI MKKMMEMAK+HN
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 88
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of MELO3C007786.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.70e-24
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERR K+PR++++    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAA-EVQDLVSGVSISATASRV--KKMMELELE--- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
           AE +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 LAERNEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MELO3C007786.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.70e-24
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERR K+PR++Q+    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAA-EVQDLVSGVSISATASRV--KKMMELELE--- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88
           A+ +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 LAQPNEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MELO3C007786.jh1 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 8.6e-04
Identity = 34/88 (38.64%), Postives = 38/88 (43.18%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRHNY 60
          MADIAILVAEEYERR KH          E         I     +I   KM         
Sbjct: 1  MADIAILVAEEYERRMKHTTVGSRSSPVEF----DWWKIIPAKMTIAFDKM--------- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
            +I    + FE KS+   A S GFFSA
Sbjct: 61 --KIESLKKNFEAKSEFALAISHGFFSA 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016899241.11.13e-5198.86PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo] >KAA0036271.1 unc... [more]
XP_011657992.16.04e-4589.89uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical ... [more]
XP_038882836.18.03e-3378.41uncharacterized protein LOC120073972 [Benincasa hispida][more]
KAG6604012.11.81e-2972.73hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6594853.19.31e-2568.18hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T3Y65.49e-5298.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DTC55.49e-5298.86uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=... [more]
A0A0A0KK752.92e-4589.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1[more]
A0A6J1KS293.70e-2467.05uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122... [more]
A0A6J1HEA83.70e-2467.05uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
Match NameE-valueIdentityDescription
AT5G65207.18.6e-0438.64unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36067EXPRESSED PROTEINcoord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007786.jh1.t1MELO3C007786.jh1.t1mRNA