MELO3C007751.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C007751.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProstatic spermine-binding protein
Locationchr08: 5039974 .. 5040284 (-)
RNA-Seq ExpressionMELO3C007751.jh1
SyntenyMELO3C007751.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACATACTAATCACCAAATTAATTAACTACATATATATCTATCATGTCATCAGTGTCTTTGGAAGCTTTCGCAATGGCCGGAATGGAGTACTCCGGCGAGTGGGGGATAGATGTCGAGAAATGGGAAAGCCAAGACTTGGATTACTGCCCTCCGCCGTATCTACTGGCGGAAGGACGAGTTAACGATAACGATAATAAGGACAAAGCGTCGGATCAACAACGTCCAAGTCTTTCAGAGCCTCCGTCGCAGGCTTGCCGTTCACGATGATGATATGCTACCTTTAATTTTACCATAACTCATCTCCCTGT

mRNA sequence

AGAACATACTAATCACCAAATTAATTAACTACATATATATCTATCATGTCATCAGTGTCTTTGGAAGCTTTCGCAATGGCCGGAATGGAGTACTCCGGCGAGTGGGGGATAGATGTCGAGAAATGGGAAAGCCAAGACTTGGATTACTGCCCTCCGCCGTATCTACTGGCGGAAGGACGAGTTAACGATAACGATAATAAGGACAAAGCGTCGGATCAACAACGTCCAAGTCTTTCAGAGCCTCCGTCGCAGGCTTGCCGTTCACGATGATGATATGCTACCTTTAATTTTACCATAACTCATCTCCCTGT

Coding sequence (CDS)

ATGTCATCAGTGTCTTTGGAAGCTTTCGCAATGGCCGGAATGGAGTACTCCGGCGAGTGGGGGATAGATGTCGAGAAATGGGAAAGCCAAGACTTGGATTACTGCCCTCCGCCGTATCTACTGGCGGAAGGACGAGTTAACGATAACGATAATAAGGACAAAGCGTCGGATCAACAACGTCCAAGTCTTTCAGAGCCTCCGTCGCAGGCTTGCCGTTCACGATGA

Protein sequence

MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQRPSLSEPPSQACRSR
Homology
BLAST of MELO3C007751.jh1 vs. NCBI nr
Match: KAA0036308.1 (prostatic spermine-binding protein [Cucumis melo var. makuwa] >TYK12702.1 prostatic spermine-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (381), Expect = 5.16e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR 60
          MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR
Sbjct: 1  MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR 60

Query: 61 PSLSEPPSQACRS 73
          PSLSEPPSQACRS
Sbjct: 61 PSLSEPPSQACRS 73

BLAST of MELO3C007751.jh1 vs. NCBI nr
Match: KGN48742.1 (hypothetical protein Csa_004391 [Cucumis sativus])

HSP 1 Score: 134 bits (337), Expect = 2.54e-39
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 0

Query: 1  MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR 60
          MSSVSLEAFAMAGMEYSGEWGIDVE+WESQDLDYCPPPYLLAEGRVNDND   KASD+Q 
Sbjct: 1  MSSVSLEAFAMAGMEYSGEWGIDVEEWESQDLDYCPPPYLLAEGRVNDND---KASDEQP 60

Query: 61 PSLSEPPSQACRS 73
          PSLSEPPSQACRS
Sbjct: 61 PSLSEPPSQACRS 70

BLAST of MELO3C007751.jh1 vs. NCBI nr
Match: KAG7034201.1 (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 86.7 bits (213), Expect = 8.54e-18
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 0

Query: 3   SVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQRPS 62
           SVSLEA AMAGM+ SGEWGIDVE+WE+QDLD CPPPYLLAE R     + D+AS+Q  PS
Sbjct: 364 SVSLEALAMAGMD-SGEWGIDVEEWETQDLDRCPPPYLLAEER-----DDDEASEQ--PS 423

Query: 63  LSEPPSQACR 72
            SEPPSQ+ R
Sbjct: 424 RSEPPSQSRR 425

BLAST of MELO3C007751.jh1 vs. NCBI nr
Match: KAG6604036.1 (Zinc finger protein STOP1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.9 bits (211), Expect = 1.59e-17
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 0

Query: 3   SVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQRPS 62
           SVSLEA AMAGM+ SGEWGIDVE+WE+QDLD CPPPYLLAE R     + D+AS+Q  PS
Sbjct: 359 SVSLEALAMAGMD-SGEWGIDVEEWETQDLDRCPPPYLLAEER-----DDDEASEQ--PS 418

Query: 63  LSEPPSQACR 72
            SEPPSQ+ R
Sbjct: 419 GSEPPSQSRR 420

BLAST of MELO3C007751.jh1 vs. NCBI nr
Match: XP_022132368.1 (uncharacterized protein LOC111005244 [Momordica charantia])

HSP 1 Score: 65.9 bits (159), Expect = 7.63e-12
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0

Query: 3  SVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVND 48
          +VSLEA AMAGM+ SG WG+D ++WE+QD D  PPPYLLAEG  N+
Sbjct: 2  TVSLEALAMAGMD-SGNWGVDFDEWETQDSDQYPPPYLLAEGPDNE 46

BLAST of MELO3C007751.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CMY4 (Prostatic spermine-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002900 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 2.50e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR 60
          MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR
Sbjct: 1  MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR 60

Query: 61 PSLSEPPSQACRS 73
          PSLSEPPSQACRS
Sbjct: 61 PSLSEPPSQACRS 73

BLAST of MELO3C007751.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KK23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499860 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 1.23e-39
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 0

Query: 1  MSSVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQR 60
          MSSVSLEAFAMAGMEYSGEWGIDVE+WESQDLDYCPPPYLLAEGRVNDND   KASD+Q 
Sbjct: 1  MSSVSLEAFAMAGMEYSGEWGIDVEEWESQDLDYCPPPYLLAEGRVNDND---KASDEQP 60

Query: 61 PSLSEPPSQACRS 73
          PSLSEPPSQACRS
Sbjct: 61 PSLSEPPSQACRS 70

BLAST of MELO3C007751.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BW23 (uncharacterized protein LOC111005244 OS=Momordica charantia OX=3673 GN=LOC111005244 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.69e-12
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0

Query: 3  SVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAEGRVND 48
          +VSLEA AMAGM+ SG WG+D ++WE+QD D  PPPYLLAEG  N+
Sbjct: 2  TVSLEALAMAGMD-SGNWGVDFDEWETQDSDQYPPPYLLAEGPDNE 46

BLAST of MELO3C007751.jh1 vs. ExPASy TrEMBL
Match: A0A7J8Z714 (Uncharacterized protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_019228 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.94e-11
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 3  SVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAE 43
          SVS+EA AMAG++Y+ EWG+D+EKWE  D   CPPP+LLAE
Sbjct: 2  SVSIEALAMAGVDYN-EWGLDIEKWEDDDDSQCPPPHLLAE 41

BLAST of MELO3C007751.jh1 vs. ExPASy TrEMBL
Match: A0A7J9BIG2 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_019767 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.63e-11
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 3  SVSLEAFAMAGMEYSGEWGIDVEKWESQDLDYCPPPYLLAE 43
          +VS+EA AMAG++Y+ EWG+D+EKWE  D  +CPPP+LLAE
Sbjct: 2  TVSIEALAMAGVDYN-EWGLDIEKWEDDDDSHCPPPHLLAE 41

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0036308.15.16e-46100.00prostatic spermine-binding protein [Cucumis melo var. makuwa] >TYK12702.1 prosta... [more]
KGN48742.12.54e-3991.78hypothetical protein Csa_004391 [Cucumis sativus][more]
KAG7034201.18.54e-1870.00Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, partial [Cucurbita argyrosperma sub... [more]
KAG6604036.11.59e-1770.00Zinc finger protein STOP1-like protein, partial [Cucurbita argyrosperma subsp. s... [more]
XP_022132368.17.63e-1265.22uncharacterized protein LOC111005244 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CMY42.50e-46100.00Prostatic spermine-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KK231.23e-3991.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499860 PE=4 SV=1[more]
A0A6J1BW233.69e-1265.22uncharacterized protein LOC111005244 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A7J8Z7143.94e-1165.85Uncharacterized protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_019228 P... [more]
A0A7J9BIG25.63e-1163.41Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_019767 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007751.jh1.t1MELO3C007751.jh1.t1mRNA