MELO3C007703.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C007703.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	elongator complex protein 4
Location	chr08: 4711374 .. 4715495 (-)
RNA-Seq Expression	MELO3C007703.jh1
Synteny	MELO3C007703.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGCGAAGTGGTTTCTGGACACAAAACGCACGGTCCAATTTGAGAAGAATCGAGTTCTTGCTCCCGCCAATTTTTTCGACTAAACTTCTATTGGTTTGAGAGCAACTCAATTCTCAACATTGAATCTCAGGTGTGTGCTTAATGAATCTTTGTATTTATTACGTAATTTTTCTAGCGGCCGCTAAGTTTTTTTGTTGTTGCCAACCAAGTGTTTGATGAAATGCCCGTATGAATTATTTTAGTAAAGTTGCAATGCTTGCTGGGACTGATCGAGTTTCTTATTTTAACCTGTATGTATTTATGAATAATTTCTGTTCAACTGTTAATTTTTAAGATGCTTGACATCACTCTCTCATTTTTGCTCTTACTTTGTCGCCGTCTTCTTCTTTCCCTAATCAGTCTGTTATTCTCATGCTCGTATGATTTAAGACAGTTAATTGCAGCTTTCAGGGTCTTCATTGACTTGGGTAGACCATAGAACTGTCTTTTCTGAGATGATTTACTCAACGCTTTAAAGCATTAACCAAAATATGGCAGCGACAAAGCCTCGGACAGGCAGCTTTTCACGCAACTTCTCTTCTGCTCATTCATCTAAGACGCCAGGATATAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAGTACTTTCAACACCATATTCATCAGTTCAAAATTGTTGGAATTTGAAATATTGAAACCTTTTAATCCATTCCCATATCCTACTTTTGGACTAGCCTCAATTTCTCCATTTTTTTGGTTGCAGAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTAATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCAAGAGGATTCTTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTTCTGAACAGGTGCTACACTTTTTATTCACTTATGCAATTACTTCGATTTCGGATTTAGATGGAAAGATGTATGATCTGATTGGATTTATTTCAGGAGAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCACCAATGCCATTGGTAACCTTACTGACCTCAACCTAATAGTTTTTGGCTGGTGTTTGATCTCAATGAACAGCAACAAATGGATTGTTTTAATTATGTGGTGAAACTGCTTGTCATATTATGATGAAGTCTTCTGGGAAAAAGTACAACTTTCTGTCAACTTTCATGCAGTATATATATTTAGTTCATGTCCATTCGAGGATTGTAGTACAACTTTCATCCTGACATGTTTCCCATGTTACGAAAACATCTTGAAATCTATTTTTTTTTCCCAACCCCTTAAATAATGACTCACTCTCACTGCCACAGCATTAAATATAATATAATACTGTTCTTATTGGAGAAAATTATGTAATTCTTGTACAGACAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTAATTTTCGCGATCGCTGCGCCACGTTCCTATCACAAGTTCCAAGGTACCGTTGGCCTCTGCTTTCCCTCCTAAATTACATATATTAAAGTAATTGCATTAGTATGTTAGATTCAATTTGAGTTCATTATAAAATATTTCAAGCAACCATTCTTAGTCTGCAATAAGCGCTAGCTTCTTTTTGAGGTGGGTGGAGATGGAAATAGTTGGATTGGGATCTTGGATTAGATTCTGTATCTCCTCGTTGGCATTTGGAGAATGTTTGATAAAGATAAATAGGGTCTTCTTATTTAAGATTGGGATTTGGGAACAAATTGGGCATCAAATTACATCATGCAGTGTTTTCATGACATGTAGTTTTTGCTAAACGCAACCATCCGAGCTCATTTTCTAACTCCGAATGCAAGGGCAAGAACTTTAGGCCAATACGAAATGAACTATTCTGGATTTCATCTGTAATTTATCCCACCTTCAGATTTGGCATTCAAGAAAACCTTTGTGAGAGAGTGAGCGTGGAATCTATTTGGGAGAAAACCTGACTTTTGGACTGAATTGATTATTATTTTCTGAAAGGAAACCAGTTTTTCATTGATGAAATGAAAAGATACTAATGCGCAAAATACATTTGAAACAAAATAAGCTGGATACAGCAAATACAACAAAATATAGCACATAACTGACCTAATCAAGAAAAGTAAAGAAAATACAATCAAATACAAGCCCACAACAGAACAAAATGGCTTCAAACGAAACTCTAAACATCAACCGAGTTGAATTATTTTATTTATGTATTAGTTGAATGTGCATAATCGGAGGATATTTTTAACCGGAGTTGAGGACTTTGTCCCTTGTTCGTTGTTGTACAGCGTCTTGGATATATGTCGCTGCCCTTCTTTTCATCTGTTTGCTTTTGCAACCTTGTGCACCCTCTTATTTTTTTTTATATGAAAGTTTTGTTTTCAAAAAGAAAACAATGGGGAAAAGAAAAAGTGAATCTGTCAATTGGGGTAATTTGAACTTTGAAGTTTATTTTAATTTATGTTTGATGTGATCACTCCAGTATGATTCATTTTAATTTATATAGTACTTTACATTGATGTCATGCGACAATTCCAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGTTAGTGACAGATTAAATTTAAGCTGGCAATGATCGCATTATAATGATCGTTTCTTAAGTTTCATTACATTGATAGAGCTCTGTGCACATTTTCCTCCAAGGGAAGATTTGAAATTCTTTACTGTGTTAAAAATCTACGTTTGCTGCAGGAATGGGAAATGCTTTCCTTTTTAAGGTATCTGAAAAGCATGGTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTCGCCGTCCTTCTCTAAAAGATGGCAGCACATGGCGGATACCTTGCTTTCAGTCAGAGCAATCCCAGGTTTAGACTTGGCAACTATGTCTACCTTTTTGTCTCTGACATCATTGAGAATTGACTAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGCTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTATGCATGCCTGCAACTTAGGAATGGACTGAATGGTGAAATGCTGTTTGTGCAATTTTTTCACCTAACGTTAGCTTCTTTACTCTTCTGCGTATTTCTATTGGTTTTGGTTCATACATGAGCTGGATCACTGGCCCCCAATGGTCATCTCGACTCTTTATTTATAACTGGACTTGATATGCATCAATAATTCGGGTTGATTTTACGTTTAAGCGGTTTAATCTAGAAAAAAACTTAACTAGGAAGGCATTTTTATTTCAACTAAAAGGTCAAAGGTTAGAATTTTCACTTCCAAGTGTCCATGAACTAAAATTTTAAAAAAGTATATATATGATCTTCAGAAAACTTCACTGATCGATCTATTTCCCAAACTTTCTAAATTGAAATATAATTTTCCTGGATGATAACTTCTTTTTAGCTGGTTTCTAATCGTGCTTATTGATTTCAAAATCCAACTGCAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGCCTTAATCAAGCGCCCATTGATGTTTCAAGTGGCAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCGTCAGCATAAAGAGTTTTAAGGGTTGAATGATTGAAGTTTAATGTTAAGTTTAAGATGGTATTTTGTTGATTGTTGATTAGTTGTATTTTCCCTTGCTCTTTTGGATCCATTATTGTTTTTTGGTTTCATGTCCATTAGATTTGAAAATTTAAAAAAAAAATCAAATAATTCAAATGGAA

mRNA sequence

AAATTGCGAAGTGGTTTCTGGACACAAAACGCACGGTCCAATTTGAGAAGAATCGAGTTCTTGCTCCCGCCAATTTTTTCGACTAAACTTCTATTGGTTTGAGAGCAACTCAATTCTCAACATTGAATCTCAGCTTTCAGGGTCTTCATTGACTTGGGTAGACCATAGAACTGTCTTTTCTGAGATGATTTACTCAACGCTTTAAAGCATTAACCAAAATATGGCAGCGACAAAGCCTCGGACAGGCAGCTTTTCACGCAACTTCTCTTCTGCTCATTCATCTAAGACGCCAGGATATAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTAATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCAAGAGGATTCTTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTTCTGAACAGGAGAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCACCAATGCCATTGACAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTAATTTTCGCGATCGCTGCGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTATCTGAAAAGCATGGTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTCGCCGTCCTTCTCTAAAAGATGGCAGCACATGGCGGATACCTTGCTTTCAGTCAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGCTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGCCTTAATCAAGCGCCCATTGATGTTTCAAGTGGCAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCGTCAGCATAAAGAGTTTTAAGGGTTGAATGATTGAAGTTTAATGTTAAGTTTAAGATGGTATTTTGTTGATTGTTGATTAGTTGTATTTTCCCTTGCTCTTTTGGATCCATTATTGTTTTTTGGTTTCATGTCCATTAGATTTGAAAATTTAAAAAAAAAATCAAATAATTCAAATGGAA

Coding sequence (CDS)

ATGGCAGCGACAAAGCCTCGGACAGGCAGCTTTTCACGCAACTTCTCTTCTGCTCATTCATCTAAGACGCCAGGATATAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTAATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCAAGAGGATTCTTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTTCTGAACAGGAGAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCACCAATGCCATTGACAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTAATTTTCGCGATCGCTGCGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTATCTGAAAAGCATGGTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTCGCCGTCCTTCTCTAAAAGATGGCAGCACATGGCGGATACCTTGCTTTCAGTCAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGCTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGCCTTAATCAAGCGCCCATTGATGTTTCAAGTGGCAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAG

Protein sequence

MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASLEF

Homology

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BLAST of MELO3C007703.jh1 vs. NCBI nr
Match: XP_008440520.1 (PREDICTED: elongator complex protein 4 isoform X1 [Cucumis melo] >XP_008440521.1 PREDICTED: elongator complex protein 4 isoform X1 [Cucumis melo] >KAA0036358.1 elongator complex protein 4 isoform X1 [Cucumis melo var. makuwa] >TYK12752.1 elongator complex protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 720 bits (1858), Expect = 1.06e-261
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360
           VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 362
           EF
Sbjct: 361 EF 362

[Close]

BLAST of MELO3C007703.jh1 vs. NCBI nr
Match: XP_004143437.1 (elongator complex protein 4 [Cucumis sativus] >XP_031743242.1 elongator complex protein 4 [Cucumis sativus] >KGN48686.1 hypothetical protein Csa_004190 [Cucumis sativus])

HSP 1 Score: 696 bits (1797), Expect = 2.10e-252
Identity = 349/362 (96.41%), Postives = 354/362 (97.79%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRT SFSRNFSSAHSSKTPG+KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360
           VAQ+NTQVPKILEATTFSIKLQKRRYLVLECLNQAP+D SSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 362
           EF
Sbjct: 361 EF 362

[Close]

BLAST of MELO3C007703.jh1 vs. NCBI nr
Match: XP_038881127.1 (elongator complex protein 4 [Benincasa hispida])

HSP 1 Score: 686 bits (1771), Expect = 1.93e-248
Identity = 346/362 (95.58%), Postives = 350/362 (96.69%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MA TKPRT SFSRNFSSAHSSKTPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MATTKPRTSSFSRNFSSAHSSKTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFF GKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFCGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LS F + CATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEW+MLSFLR LKSM+RS
Sbjct: 181 LSTFPECCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWKMLSFLRSLKSMLRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360
           VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPID SSGSSYGSTGSCSGSSKT SL
Sbjct: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDGSSGSSYGSTGSCSGSSKTGSL 360

Query: 361 EF 362
           EF
Sbjct: 361 EF 362

[Close]

BLAST of MELO3C007703.jh1 vs. NCBI nr
Match: XP_022963340.1 (elongator complex protein 4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 660 bits (1704), Expect = 3.25e-238
Identity = 330/361 (91.41%), Postives = 343/361 (95.01%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDSKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QES NAID KYEFCNDFDLR+PFDRHFFSGKHVECVSILDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQESVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSILDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKV 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN+HKV
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLNIHKV 302

Query: 302 AQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASLE 361
           AQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSKT SL+
Sbjct: 303 AQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKTGSLD 362

[Close]

BLAST of MELO3C007703.jh1 vs. NCBI nr
Match: XP_023003256.1 (elongator complex protein 4 [Cucurbita maxima] >XP_023003257.1 elongator complex protein 4 [Cucurbita maxima] >XP_023003258.1 elongator complex protein 4 [Cucurbita maxima])

HSP 1 Score: 657 bits (1695), Expect = 7.64e-237
Identity = 327/361 (90.58%), Postives = 343/361 (95.01%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKV 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN+HKV
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLNIHKV 302

Query: 302 AQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASLE 361
           AQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSK  SL+
Sbjct: 303 AQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKAGSLD 362

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy Swiss-Prot
Match: Q9C778 (Elongator complex protein 4 OS=Arabidopsis thaliana OX=3702 GN=ELP4 PE=1 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 1.2e-128
Identity = 239/363 (65.84%), Postives = 289/363 (79.61%), Query Frame = 0


Query: 1   MAATKPR-TGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R + SFSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 120
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVR 240
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 241 SSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 300
            SNAVA+VTFPPSLLSPS SKR QHMADTLLS++AIPD DKEL KLLTGY+D+ G LN+H
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKELEKLLTGYKDINGFLNIH 300

Query: 301 KVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTAS 360
           KVA+INTQVP ILEA TFS+ L+KRR+L LECLNQAP+D SSG+SYG++GSC  SSK+ +
Sbjct: 301 KVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SSKSGA 355

Query: 361 LEF 363
           L+F
Sbjct: 361 LDF 355

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy Swiss-Prot
Match: Q54XS0 (Probable elongator complex protein 4 OS=Dictyostelium discoideum OX=44689 GN=elp4 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-23
Identity = 97/374 (25.94%), Postives = 179/374 (47.86%), Query Frame = 0


Query: 12  SRNFSSAHSSKTPGYKHGPNG--------TTFISSGIPDLDKILCGGFPLGSLVLVMEDA 71
           + N S+  ++ T   K  PNG            S+G+ DLD I+ GG P+GS++++ ED 
Sbjct: 29  TNNTSTTTTTTTTAAKKLPNGCKISIKNSNLLTSTGLTDLDDIIGGGIPIGSILMIEEDI 88

Query: 72  EAPHHMLLLRNFMSQGLVHNQPLLYAS-PSRDPRGFLGTLPSP-------GASKDD---- 131
            + ++M LL+ F+++G++  Q + ++S    DP   L  LP+         A K+D    
Sbjct: 89  NSSYYMFLLKYFLAEGVLQQQGVFFSSLIGIDPFEILNKLPARITKEEEIEADKNDTTNN 148

Query: 132 -----KSRDNSSEQEKGLRIAWQYKKYFGDD------QESTNAIDSKYEFCNDFDLRRPF 191
                 + +N+ +    L+IAW+Y++Y  ++      Q+S + I ++  FC+ +D  R  
Sbjct: 149 INTNINTNNNNKQPTDELKIAWRYQQYVSNELSKQQQQQSASTIMNQ-TFCHSYDFTRKM 208

Query: 192 DRHFFSGKHVECVSILDSSSLSNFRDRCATFL---------SQVPRNDGNISSAGRIAIQ 251
           +    + + +  +S    S           FL         ++    + + +   R+ IQ
Sbjct: 209 NVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLEIQNLVYKYNKEAAMNPDQTRVLRLCIQ 268

Query: 252 SLCAPQCDHSNMEWEMLSFLRYLKSMVRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLS 311
           S  +P    SN E  ++ FL  LK ++RSS A  V++ P  + S +F K+  H+ DT++S
Sbjct: 269 SFSSPL--WSNDEEGVIEFLHALKGLLRSSVATCVISVPTYIYSGAFVKKIAHLCDTVVS 328

Query: 312 VRAIPDEDKELAKLLTGYQDMVGLLNVHKVAQINT-QVPKILEATTFSIKLQKRRYLVLE 345
           + +      E  +    Y   +GL N+ K+A++NT  +    +  TF  K+ KRR + +E
Sbjct: 329 INSFSGLGGETPEQFAEY---LGLFNIRKIARLNTLSLSFHPDMLTFVFKM-KRRKMCIE 388

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy Swiss-Prot
Match: Q9ER73 (Elongator complex protein 4 OS=Mus musculus OX=10090 GN=Elp4 PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 9.0e-20
Identity = 85/338 (25.15%), Postives = 156/338 (46.15%), Query Frame = 0


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+L+L+ ED    +  LL + FM++G+++   LL AS
Sbjct: 57  NGQLLVSTGLPALDQLLGGGLAVGTLLLIEEDKYNIYSPLLFKYFMAEGIINGHTLLVAS 116

Query: 91  PSRDPRGFLGTLPSPGASKDDKSR------DNSSEQEKGLRIAWQYKKYFGDDQESTNAI 150
              +P   L  LP+P    + K          + E    ++IAW+Y+       E     
Sbjct: 117 AKENPAKILQELPAPLLDDNSKKELEDVHSAKTPEPNVNMKIAWRYQ--LQPKMEVGPVS 176

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSNFRDRCATFLSQVPR 210
            S++    D   R P++         FF  +H+      +S  LS    R   F+ +   
Sbjct: 177 SSRFGHYYDLSKRIPWELLQSSKWHGFFLPEHISPDLKGESCFLSCGYMRLLEFIQKSVY 236

Query: 211 NDG--------NISSAGRIAIQSL----------CAPQCDHSNMEWEMLSFLRYLKSMVR 270
            +G           +  RI IQ+L          C   CD+++    +  FL  L+ ++R
Sbjct: 237 AEGFDGANPQKKQKNILRIGIQNLGSPLWGDDICCKENCDNNH---RLTKFLYILRGLLR 296

Query: 271 SSNAVAVVTFPPSLL-SPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 330
           SS +  ++T P  L+ + S + R ++++DT++ + +    ++E   L   Y+D  GL+++
Sbjct: 297 SSLSACIITMPAHLVQNKSITTRVRNLSDTVVGLESFIGSERETNPL---YKDYHGLIHI 356

Query: 331 HKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAP 337
            K+ ++N       +    + KL KR+   +E L+  P
Sbjct: 357 RKIPRLNNLTCDESDVKDLAFKL-KRKLFTIERLHLPP 385

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy Swiss-Prot
Match: Q2TBH6 (Elongator complex protein 4 OS=Bos taurus OX=9913 GN=ELP4 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.5e-19
Identity = 89/358 (24.86%), Postives = 166/358 (46.37%), Query Frame = 0


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+++L+ ED    +  LL + F+++G+V    LL AS
Sbjct: 58  NGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIVSGHALLVAS 117

Query: 91  PSRDPRGFLGTLPSP------GASKDDKSRDNSSEQEKGLRIAWQYKKYFGDDQESTNAI 150
              DP   L  LP+P          D+    +  E +  ++IAW+Y+       E+    
Sbjct: 118 AKEDPADILQKLPAPLIDDSYKKECDEDVCSHKMEPDIKMKIAWRYQLL--PKMEAGPVS 177

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSNFRDRCATFLSQVPR 210
            S++    D   R P +         FF  + +     ++S SL+    +   F+  +  
Sbjct: 178 SSRFGHYYDISKRIPQELIETSKWHGFFLPEKISSAFNVESCSLTPGYMKLLQFIQNIIY 237

Query: 211 NDGNISSAG--------RIAIQSL----------CAPQCDHSNMEWEMLSFLRYLKSMVR 270
            +G   S          RI IQ+L          C   CD S+    +  FL  L+ ++R
Sbjct: 238 KEGFDGSNPQKKQKNILRIGIQNLGSPLWGDDICCTENCDTSH---SLTKFLYILRGLLR 297

Query: 271 SSNAVAVVTFPPSLL-SPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 330
           +S +  ++T P  L+ + +   R  +++DT++ + +    +KE   L   Y+D  GL+++
Sbjct: 298 TSLSACIITMPTHLIQNKAVIARVTNLSDTVVGLESFIGSEKETNPL---YKDYHGLIHI 357

Query: 331 HKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 357
            ++ ++N  +  I +    + KL+K+ +  +E L+  P D+S   S  S    + S+K
Sbjct: 358 RQIPRLNNLIYDISDVKDLAFKLKKKLF-TIERLHLPP-DLSDTVSRSSKQDLAESTK 405

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy Swiss-Prot
Match: Q5XG58 (Elongator complex protein 4 OS=Xenopus laevis OX=8355 GN=elp4 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18
Identity = 94/366 (25.68%), Postives = 171/366 (46.72%), Query Frame = 0


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 90
           NG   +S+G+P LD IL GG  +G+L+L+ ED    +  LLL+ F+++G+V    +  AS
Sbjct: 42  NGQLLVSTGVPSLDHILGGGLAVGTLLLIEEDTYGTYSHLLLKYFLAEGVVSGHEVFVAS 101

Query: 91  PSRDPRGFLGTLPSPGASKDDKSRD---------NSSEQEKGLRIAWQYKKYFGDDQEST 150
            + DP   L  LPSP   +  +  D          + + ++ ++IAW+Y+      +  T
Sbjct: 102 ANDDPTETLQDLPSPLTDEVPRQNDPKRTKDTSGPADDSQEMMKIAWRYQNL---PKVET 161

Query: 151 NAIDSKYEFCNDFDLRRPFDRHFFSGKH-VECVSILDSSSLSNFRDRCATF------LSQ 210
             I S   F + +DL +       +  H      I+ ++   N  +    +      + +
Sbjct: 162 LPISSS-RFGHYYDLSKTMPPEMSAKSHRFYLPRIMSANQKQNVSEVTCNYNQLLESIQR 221

Query: 211 VPRNDGNISSAG--------RIAIQSL---------CA---PQCDHSNMEWEMLSFLRYL 270
           V   +G   S          R+ I+SL         C+   P+  HS     +  FL  L
Sbjct: 222 VVHQEGYDGSNPQKRPKTILRLGIESLGSVLWADDICSQERPENQHS-----LTRFLYGL 281

Query: 271 KSMVRSSNAVAVVTFPPSLL-SPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMV 330
           + ++R+S +V V+T P  L+ + + + R + ++DT++ + +    + E   L   Y+D  
Sbjct: 282 RGLLRTSLSVCVITVPTYLIQNKAITTRLRSLSDTVVGLESFIGSEMEANPL---YKDYH 341

Query: 331 GLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSG 360
           GLL+VH++ ++N+ +    +    + KL KR+   +E L+  P D+S   S  S    +G
Sbjct: 342 GLLHVHQIPRLNSLISDGSDTKDLAFKL-KRKIFAIERLHLPP-DLSDTVSRSSKQDLAG 393

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B1C3 (elongator complex protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484919 PE=3 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 5.12e-262
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360
           VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 362
           EF
Sbjct: 361 EF 362

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T0K9 (Elongator complex protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003400 PE=3 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 5.12e-262
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360
           VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 362
           EF
Sbjct: 361 EF 362

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KLQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497360 PE=3 SV=1)

HSP 1 Score: 696 bits (1797), Expect = 1.02e-252
Identity = 349/362 (96.41%), Postives = 354/362 (97.79%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRT SFSRNFSSAHSSKTPG+KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360
           VAQ+NTQVPKILEATTFSIKLQKRRYLVLECLNQAP+D SSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 362
           EF
Sbjct: 361 EF 362

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HHQ8 (elongator complex protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463575 PE=3 SV=1)

HSP 1 Score: 660 bits (1704), Expect = 1.57e-238
Identity = 330/361 (91.41%), Postives = 343/361 (95.01%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDSKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QES NAID KYEFCNDFDLR+PFDRHFFSGKHVECVSILDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQESVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSILDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKV 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN+HKV
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLNIHKV 302

Query: 302 AQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASLE 361
           AQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSKT SL+
Sbjct: 303 AQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKTGSLD 362

[Close]

BLAST of MELO3C007703.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KLY1 (elongator complex protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111496919 PE=3 SV=1)

HSP 1 Score: 657 bits (1695), Expect = 3.70e-237
Identity = 327/361 (90.58%), Postives = 343/361 (95.01%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKV 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN+HKV
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLNIHKV 302

Query: 302 AQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASLE 361
           AQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSK  SL+
Sbjct: 303 AQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKAGSLD 362

[Close]

BLAST of MELO3C007703.jh1 vs. TAIR 10
Match: AT3G11220.1 (Paxneb protein-related )

HSP 1 Score: 461.1 bits (1185), Expect = 8.4e-130
Identity = 239/363 (65.84%), Postives = 289/363 (79.61%), Query Frame = 0


Query: 1   MAATKPR-TGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R + SFSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 120
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVR 240
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 241 SSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 300
            SNAVA+VTFPPSLLSPS SKR QHMADTLLS++AIPD DKEL KLLTGY+D+ G LN+H
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKELEKLLTGYKDINGFLNIH 300

Query: 301 KVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTAS 360
           KVA+INTQVP ILEA TFS+ L+KRR+L LECLNQAP+D SSG+SYG++GSC  SSK+ +
Sbjct: 301 KVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SSKSGA 355

Query: 361 LEF 363
           L+F
Sbjct: 361 LDF 355

[Close]

BLAST of MELO3C007703.jh1 vs. TAIR 10
Match: AT3G11220.2 (Paxneb protein-related )

HSP 1 Score: 448.4 bits (1152), Expect = 5.6e-126
Identity = 238/381 (62.47%), Postives = 289/381 (75.85%), Query Frame = 0


Query: 1   MAATKPR-TGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R + SFSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 120
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSNFRDRCATFLSQVP------------------RNDGNISSAGRIAIQSLCAPQCDHS 240
            LS  +D CATFLS+ P                  +N  NI+S GRIAIQS C+P C++S
Sbjct: 181 DLSIAQDHCATFLSKFPSKFCSSSILFTSLLYFQAQNSSNIASIGRIAIQSFCSPLCEYS 240

Query: 241 NMEWEMLSFLRYLKSMVRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKE 300
             E +MLSF+R LKSM+  SNAVA+VTFPPSLLSPS SKR QHMADTLLS++AIPD DKE
Sbjct: 241 EKESDMLSFIRLLKSMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKE 300

Query: 301 LAKLLTGYQDMVGLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSS 360
           L KLLTGY+D+ G LN+HKVA+INTQVP ILEA TFS+ L+KRR+L LECLNQAP+D SS
Sbjct: 301 LEKLLTGYKDINGFLNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSS 360

Query: 361 GSSYGSTGSCSGSSKTASLEF 363
           G+SYG++GSC  SSK+ +L+F
Sbjct: 361 GTSYGTSGSC--SSKSGALDF 373

The following BLAST results are available for this feature:

BLAST of MELO3C007703.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440520.1	1.06e-261	100.00	PREDICTED: elongator complex protein 4 isoform X1 [Cucumis melo] >XP_008440521.1...	[more]
XP_004143437.1	2.10e-252	96.41	elongator complex protein 4 [Cucumis sativus] >XP_031743242.1 elongator complex ...	[more]
XP_038881127.1	1.93e-248	95.58	elongator complex protein 4 [Benincasa hispida]	[more]
XP_022963340.1	3.25e-238	91.41	elongator complex protein 4 isoform X2 [Cucurbita moschata]	[more]
XP_023003256.1	7.64e-237	90.58	elongator complex protein 4 [Cucurbita maxima] >XP_023003257.1 elongator complex...	[more]

BLAST of MELO3C007703.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C778	1.2e-128	65.84	Elongator complex protein 4 OS=Arabidopsis thaliana OX=3702 GN=ELP4 PE=1 SV=1	[more]
Q54XS0	1.8e-23	25.94	Probable elongator complex protein 4 OS=Dictyostelium discoideum OX=44689 GN=elp...	[more]
Q9ER73	9.0e-20	25.15	Elongator complex protein 4 OS=Mus musculus OX=10090 GN=Elp4 PE=1 SV=2	[more]
Q2TBH6	4.5e-19	24.86	Elongator complex protein 4 OS=Bos taurus OX=9913 GN=ELP4 PE=2 SV=1	[more]
Q5XG58	1.7e-18	25.68	Elongator complex protein 4 OS=Xenopus laevis OX=8355 GN=elp4 PE=2 SV=1	[more]

BLAST of MELO3C007703.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1C3	5.12e-262	100.00	elongator complex protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484919 P...	[more]
A0A5A7T0K9	5.12e-262	100.00	Elongator complex protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KLQ1	1.02e-252	96.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497360 PE=3 SV=1	[more]
A0A6J1HHQ8	1.57e-238	91.41	elongator complex protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KLY1	3.70e-237	90.58	elongator complex protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111496919 PE=3 SV=...	[more]

BLAST of MELO3C007703.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11220.1	8.4e-130	65.84	Paxneb protein-related	[more]
AT3G11220.2	5.6e-126	62.47	Paxneb protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 15..282 e-value: 7.0E-54 score: 184.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 34..274
IPR008728	Elongator complex protein 4	PFAM	PF05625	PAXNEB	coord: 21..282 e-value: 3.7E-65 score: 220.5
IPR008728	Elongator complex protein 4	PANTHER	PTHR12896	PAX6 NEIGHBOR PROTEIN PAXNEB	coord: 9..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007703.jh1.t1	MELO3C007703.jh1.t1	mRNA
MELO3C007703.jh1.t3	MELO3C007703.jh1.t3	mRNA
MELO3C007703.jh1.t2	MELO3C007703.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	elongator holoenzyme complex