MELO3C007703 (gene) Melon (DHL92) v4

Overview


Name	MELO3C007703
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	elongator complex protein 4
Location	chr08: 4759350 .. 4763251 (-)
RNA-Seq Expression	MELO3C007703
Synteny	MELO3C007703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGCGATCTAAGGCCGCTTATTTGCAGAAATTGCGAAGTGGTTTCTGGACACAAAACGCACGGTCCAATTTGAGAAGAATCGAGTTCTTGCTCCCGCCAATTTTTTCGACTAAACTTCTATTGGTTTGAGAGCAACTCAATTCTCAACATTGAATCTCAGGTATGTGCTTAATGAATCTTTGTATTTATTACGTAATTTTTCTAGCGGCCGCTAAGTTTTTTTTGTTGTTGCCAACCAAGTGTTTGATGAAATGCCCGTATGAATTATTTTAATAAAGTTGCAATGCTTGCTGGGACTGATCGAGTTTCTTATTTTAACCTGTATGTATTTATGAATAATTTCTGTTCAACTGTTAATTTTTAAGATGCTTGACATCACTCTCTCATTTTTGCTCTTACTTTGTCGCCGTCTTCTTCTTTCCCTAATCAGTATGTTATTCTCATGCTCGTATGATTTAAGACAGTTAATTGCAGCTTTCAGGGTCTTCATTGACTTGGGTAGACCATAGAACTGTCTTTTCTGAGATGATTTACTCAACGCTTTAAAGCATTAACCAAAATATGGCAGCGACAAAGCCTCGGACAGGCAGCTTTTCACGCAACTTCTCTTCTGCTCATTCATCTAAGACGCCAGGATATAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAGTACTTTCAACACCATATTCATCAGTTCAAAATTGTTGGAATTTGAAATATTGAAACCTTTTAATCCATTCCCATATCCTACTTTTGGACTAGCCTCAATTTCTCCATTTTTTTGGTTGCAGAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTAATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCAAGAGGATTCTTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTTCTGAACAGGTGCTACACTTTTTATTCACTTATGCAATTACTTCGATTTCGGATTTAGATGGAAAGATGTATGATCTGATTGGATTTATTTCAGGAGAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCACCAATGCCATTGGTAACCTTACTGACCTCAACCTAATAGTTTTTGGCTGGTGTTTGATCTCAATGAACAGCAACAAATGGATTGTTTTAATTATGTGGTGAAACTGCTTGTCATATTATGATGAAGTCTTCTGGGAAAAAGTATAACTTTCTGTCAACTTTCATGCAGTATATATATTTAGTTCATGTCCATTCGAGGATTGTAGTACAACTTTCATCCTGACATGTTTCCCATGTTACGAAAACATCTTGAAATCTATTTTTTTTTTCCCAACCCCTTAAATAATGACTCACTCTCACTGCCACAACATTAAATATAATATAATACTGTTCTTATTGGAGAAAATTATGTAATTCTTGTACAGACAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGTGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTAATTTTCGCGATCGCTGCGCCACGTTCCTATCACAAGTTCCAAGGTACCGTTGGCCTCTGCTTTCCCTCCTAAATTACATATATTAAAGTAATTGCATTAGTATGTTAGATTCAATTTGAGTTCATTATAAAATATTTCAAGCAACCATTCTTAGTCTGCAATAAGCGCTAGCTTCTTTTTGAGGTGGGTGGAGATGGAAATAGTTGGATTGGGATCTTGGATTAGATTCTGTATCTCCTCGTTGGCATTTGGAGAATGTTTGATAAAGATAAATAGGGTCTTCTTATTTAAGATTGGGATTTGGGAACAAATTGGGCATCAAATTACATCATGCAGTGTTTTCATGACATGTAGTTTTTGCTAAACGCAACCATCCGAGCTCATTTTCTAACTCCGAATGCAAGGGCAAGAACTTTAGGCCAATACGAAATGAACTATTCTGGATTTCATCTGTAATTTATCCCACCTTCAGATTTGGCATTCAAGAAAACCTTTGTGAGAGAGTGAGCGTGGAATCTATTTGGGAGAAAACCTGACTTTTGGACTGAATTGATTATTATTTTCTGAAAGGAAACCAGTTTTTCATTGATGAAATGAAAAGATACTAATGCGCAAAATACATTTGAAACAAAATAAGCTGGATAAAGCAAATACAACAAAATATAGCACATAACTGATCTAATCAAGAAAAGTAAAGAAAATACAATCAAATACAAGCCCACAACAGAACAAAATGGCTTCAAACGAAACTCTAAACATCAAGCAAATACACCCTCTTATTTTTTTTATATGAAAGTTTTGTTTTCAAAAAGAAAACAATGGGGAAAAGAAAAAGTGAATCTGTCAATTGGGGTAATTTGAACTTTGAAGTTTATTTTAATTTATGTTTGATGTGATCACTCCAGTATGATTCATTTTAATTTATATAGTACTTACATTGATGTCATGCGACAATTCCAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGTTAGTGACAGATTAAATTTAAGCTGGCAATGATCGCATTATAATGATCGTTTCTTAAGTTTCATTACATTGATAGAGTTCTGTGCACATTTTCCTCCAAGGGAAAATTTGAAATTCTTTACTGTGTTAAAAATCTACGTTTGCTGCAGGAATGGGAAATGCTTTCCTTTTTAAGGTATCTGAAAAGCATGGTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTCGCCGTCCTTCTCTAAAAGATGGCAGCACATGGCGGATACCTTGCTTTCAGTCAGAGCAATCCCAGGTTTAGACTTGGCAACTATATTTACCTTTTTGTCTCTGACATCATTGAGAATTGACTAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGCTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTATGCATGCCTGCAACTTAGGAATGGACTGAATGCTGAAATGCTGTTTGTGCAATTTTTTCACCTAACGTTAGCTTCTTTACTCTTCTGCGTATTTCTATTGGTTTTGGTTCATACATGAGCCGGATCACTGGCCCCCAATGGTCATCTCGACTCTTTATTTATAACTGGACTTATGCATCAATATTCTGGTTGATTTTACGTTTAAGCGGATTAATCTAGAAAAAAACTTAACTAGGAAGGCATTTTTATTTCAACTAAAAGGTCAAAGGTTAGAATTTTCACTTCCAAGTGTCCATAACTAAAATTTTAAAAAAGTATATATATGATCTTCAGAAAACTTCACTGATCGATCTATTTCCCAAACTTTCTAAATTGAAATATAATTTTCCTGGATGATAACTTCTTTTTAGCTGGTTTCTAATCGTGCTTATTGATTTCAAAATCCAACTGCAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGCCTTAATCAAGCGCCCATTGATGTTTCAAGTGGCAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCGTCAGCATAAAGAGTTTTAAGGGTTGAATGATTGAAGTTTAATGTTAAGTTTAAGATGGTATTTTGTTGATTGTTGATTAGTTGTATT

mRNA sequence

GGCGCGATCTAAGGCCGCTTATTTGCAGAAATTGCGAAGTGGTTTCTGGACACAAAACGCACGGTCCAATTTGAGAAGAATCGAGTTCTTGCTCCCGCCAATTTTTTCGACTAAACTTCTATTGGTTTGAGAGCAACTCAATTCTCAACATTGAATCTCAGCTTTCAGGGTCTTCATTGACTTGGGTAGACCATAGAACTGTCTTTTCTGAGATGATTTACTCAACGCTTTAAAGCATTAACCAAAATATGGCAGCGACAAAGCCTCGGACAGGCAGCTTTTCACGCAACTTCTCTTCTGCTCATTCATCTAAGACGCCAGGATATAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTAATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCAAGAGGATTCTTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTTCTGAACAGGAGAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCACCAATGCCATTGACAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGTGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTAATTTTCGCGATCGCTGCGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTATCTGAAAAGCATGGTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTCGCCGTCCTTCTCTAAAAGATGGCAGCACATGGCGGATACCTTGCTTTCAGTCAGAGCAATCCCAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGCTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGCCTTAATCAAGCGCCCATTGATGTTTCAAGTGGCAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCGTCAGCATAAAGAGTTTTAAGGGTTGAATGATTGAAGTTTAATGTTAAGTTTAAGATGGTATTTTGTTGATTGTTGATTAGTTGTATT

Coding sequence (CDS)

ATGGCAGCGACAAAGCCTCGGACAGGCAGCTTTTCACGCAACTTCTCTTCTGCTCATTCATCTAAGACGCCAGGATATAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTAATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCAAGAGGATTCTTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTTCTGAACAGGAGAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCACCAATGCCATTGACAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGTGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTAATTTTCGCGATCGCTGCGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTATCTGAAAAGCATGGTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTCGCCGTCCTTCTCTAAAAGATGGCAGCACATGGCGGATACCTTGCTTTCAGTCAGAGCAATCCCAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGCTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGCCTTAATCAAGCGCCCATTGATGTTTCAAGTGGCAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAG

Protein sequence

MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASLEF

Homology

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BLAST of MELO3C007703 vs. NCBI nr
Match: XP_008440520.1 (PREDICTED: elongator complex protein 4 isoform X1 [Cucumis melo] >XP_008440521.1 PREDICTED: elongator complex protein 4 isoform X1 [Cucumis melo] >KAA0036358.1 elongator complex protein 4 isoform X1 [Cucumis melo var. makuwa] >TYK12752.1 elongator complex protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202
Identity = 362/366 (98.91%), Postives = 362/366 (98.91%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLL 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP    DEDKELAKLLTGYQDMVGLL
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP----DEDKELAKLLTGYQDMVGLL 300

Query: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360
           NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK
Sbjct: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360

Query: 361 TASLEF 367
           TASLEF
Sbjct: 361 TASLEF 362

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BLAST of MELO3C007703 vs. NCBI nr
Match: XP_004143437.1 (elongator complex protein 4 [Cucumis sativus] >XP_031743242.1 elongator complex protein 4 [Cucumis sativus] >KGN48686.1 hypothetical protein Csa_004190 [Cucumis sativus])

HSP 1 Score: 693.0 bits (1787), Expect = 1.4e-195
Identity = 349/366 (95.36%), Postives = 354/366 (96.72%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRT SFSRNFSSAHSSKTPG+KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLL 300
           SNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIP    DEDKELAKLLTGYQDMVGLL
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP----DEDKELAKLLTGYQDMVGLL 300

Query: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360
           NVHKVAQ+NTQVPKILEATTFSIKLQKRRYLVLECLNQAP+D SSGSSYGSTGSCSGSSK
Sbjct: 301 NVHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSK 360

Query: 361 TASLEF 367
           TASLEF
Sbjct: 361 TASLEF 362

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BLAST of MELO3C007703 vs. NCBI nr
Match: XP_038881127.1 (elongator complex protein 4 [Benincasa hispida])

HSP 1 Score: 682.9 bits (1761), Expect = 1.5e-192
Identity = 346/366 (94.54%), Postives = 350/366 (95.63%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MA TKPRT SFSRNFSSAHSSKTPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MATTKPRTSSFSRNFSSAHSSKTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFF GKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFCGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LS F + CATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEW+MLSFLR LKSM+RS
Sbjct: 181 LSTFPECCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWKMLSFLRSLKSMLRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLL 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP    DEDKELAKLLTGYQDMVGLL
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP----DEDKELAKLLTGYQDMVGLL 300

Query: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360
           NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPID SSGSSYGSTGSCSGSSK
Sbjct: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDGSSGSSYGSTGSCSGSSK 360

Query: 361 TASLEF 367
           T SLEF
Sbjct: 361 TGSLEF 362

[Close]

BLAST of MELO3C007703 vs. NCBI nr
Match: XP_022963340.1 (elongator complex protein 4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 657.1 bits (1694), Expect = 8.7e-185
Identity = 330/365 (90.41%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDSKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QES NAID KYEFCNDFDLR+PFDRHFFSGKHVECVSILDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQESVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSILDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLLN 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIP    DEDKELA LLTGYQDMVGLLN
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIP----DEDKELANLLTGYQDMVGLLN 302

Query: 302 VHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKT 361
           +HKVAQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSKT
Sbjct: 303 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKT 362

Query: 362 ASLEF 367
            SL+F
Sbjct: 363 GSLDF 363

[Close]

BLAST of MELO3C007703 vs. NCBI nr
Match: XP_023003256.1 (elongator complex protein 4 [Cucurbita maxima] >XP_023003257.1 elongator complex protein 4 [Cucurbita maxima] >XP_023003258.1 elongator complex protein 4 [Cucurbita maxima])

HSP 1 Score: 653.7 bits (1685), Expect = 9.6e-184
Identity = 327/365 (89.59%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLLN 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIP    DEDKELA LLTGYQDMVGLLN
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIP----DEDKELANLLTGYQDMVGLLN 302

Query: 302 VHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKT 361
           +HKVAQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSK 
Sbjct: 303 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 362

Query: 362 ASLEF 367
            SL+F
Sbjct: 363 GSLDF 363

[Close]

BLAST of MELO3C007703 vs. ExPASy Swiss-Prot
Match: Q9C778 (Elongator complex protein 4 OS=Arabidopsis thaliana OX=3702 GN=ELP4 PE=1 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 6.6e-127
Identity = 239/367 (65.12%), Postives = 289/367 (78.75%), Query Frame = 0


Query: 1   MAATKPR-TGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R + SFSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 120
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVR 240
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 241 SSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGL 300
            SNAVA+VTFPPSLLSPS SKR QHMADTLLS++AIP    D DKEL KLLTGY+D+ G 
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIP----DGDKELEKLLTGYKDINGF 300

Query: 301 LNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSS 360
           LN+HKVA+INTQVP ILEA TFS+ L+KRR+L LECLNQAP+D SSG+SYG++GSC  SS
Sbjct: 301 LNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SS 355

Query: 361 KTASLEF 367
           K+ +L+F
Sbjct: 361 KSGALDF 355

[Close]

BLAST of MELO3C007703 vs. ExPASy Swiss-Prot
Match: Q54XS0 (Probable elongator complex protein 4 OS=Dictyostelium discoideum OX=44689 GN=elp4 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.3e-23
Identity = 97/378 (25.66%), Postives = 182/378 (48.15%), Query Frame = 0


Query: 12  SRNFSSAHSSKTPGYKHGPNG--------TTFISSGIPDLDKILCGGFPLGSLVLVMEDA 71
           + N S+  ++ T   K  PNG            S+G+ DLD I+ GG P+GS++++ ED 
Sbjct: 29  TNNTSTTTTTTTTAAKKLPNGCKISIKNSNLLTSTGLTDLDDIIGGGIPIGSILMIEEDI 88

Query: 72  EAPHHMLLLRNFMSQGLVHNQPLLYAS-PSRDPRGFLGTLPSP-------GASKDD---- 131
            + ++M LL+ F+++G++  Q + ++S    DP   L  LP+         A K+D    
Sbjct: 89  NSSYYMFLLKYFLAEGVLQQQGVFFSSLIGIDPFEILNKLPARITKEEEIEADKNDTTNN 148

Query: 132 -----KSRDNSSEQEKGLRIAWQYKKYFGDD------QESTNAIDSKYEFCNDFDLRRPF 191
                 + +N+ +    L+IAW+Y++Y  ++      Q+S + I ++  FC+ +D  R  
Sbjct: 149 INTNINTNNNNKQPTDELKIAWRYQQYVSNELSKQQQQQSASTIMNQ-TFCHSYDFTRKM 208

Query: 192 DRHFFSGKHVECVSILDSSSLSNFRDRCATFL---------SQVPRNDGNISSAGRIAIQ 251
           +    + + +  +S    S           FL         ++    + + +   R+ IQ
Sbjct: 209 NVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLEIQNLVYKYNKEAAMNPDQTRVLRLCIQ 268

Query: 252 SLCAPQCDHSNMEWEMLSFLRYLKSMVRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLS 311
           S  +P    SN E  ++ FL  LK ++RSS A  V++ P  + S +F K+  H+ DT++S
Sbjct: 269 SFSSPL--WSNDEEGVIEFLHALKGLLRSSVATCVISVPTYIYSGAFVKKIAHLCDTVVS 328

Query: 312 VRAIPEIITDEDKELAKLLTGYQDMVGLLNVHKVAQINT-QVPKILEATTFSIKLQKRRY 349
           + +   +  +  ++ A+ L       GL N+ K+A++NT  +    +  TF  K+ KRR 
Sbjct: 329 INSFSGLGGETPEQFAEYL-------GLFNIRKIARLNTLSLSFHPDMLTFVFKM-KRRK 388

[Close]

BLAST of MELO3C007703 vs. ExPASy Swiss-Prot
Match: Q9ER73 (Elongator complex protein 4 OS=Mus musculus OX=10090 GN=Elp4 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18
Identity = 86/342 (25.15%), Postives = 156/342 (45.61%), Query Frame = 0


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+L+L+ ED    +  LL + FM++G+++   LL AS
Sbjct: 57  NGQLLVSTGLPALDQLLGGGLAVGTLLLIEEDKYNIYSPLLFKYFMAEGIINGHTLLVAS 116

Query: 91  PSRDPRGFLGTLPSPGASKDDKSR------DNSSEQEKGLRIAWQYKKYFGDDQESTNAI 150
              +P   L  LP+P    + K          + E    ++IAW+Y+       E     
Sbjct: 117 AKENPAKILQELPAPLLDDNSKKELEDVHSAKTPEPNVNMKIAWRYQ--LQPKMEVGPVS 176

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSNFRDRCATFLSQVPR 210
            S++    D   R P++         FF  +H+      +S  LS    R   F+ +   
Sbjct: 177 SSRFGHYYDLSKRIPWELLQSSKWHGFFLPEHISPDLKGESCFLSCGYMRLLEFIQKSVY 236

Query: 211 NDG--------NISSAGRIAIQSL----------CAPQCDHSNMEWEMLSFLRYLKSMVR 270
            +G           +  RI IQ+L          C   CD+++    +  FL  L+ ++R
Sbjct: 237 AEGFDGANPQKKQKNILRIGIQNLGSPLWGDDICCKENCDNNH---RLTKFLYILRGLLR 296

Query: 271 SSNAVAVVTFPPSLL-SPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVG 330
           SS +  ++T P  L+ + S + R ++++DT++ +    E     ++E   L   Y+D  G
Sbjct: 297 SSLSACIITMPAHLVQNKSITTRVRNLSDTVVGL----ESFIGSERETNPL---YKDYHG 356

Query: 331 LLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAP 341
           L+++ K+ ++N       +    + KL KR+   +E L+  P
Sbjct: 357 LIHIRKIPRLNNLTCDESDVKDLAFKL-KRKLFTIERLHLPP 385

[Close]

BLAST of MELO3C007703 vs. ExPASy Swiss-Prot
Match: Q2TBH6 (Elongator complex protein 4 OS=Bos taurus OX=9913 GN=ELP4 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.5e-18
Identity = 90/362 (24.86%), Postives = 166/362 (45.86%), Query Frame = 0


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+++L+ ED    +  LL + F+++G+V    LL AS
Sbjct: 58  NGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIVSGHALLVAS 117

Query: 91  PSRDPRGFLGTLPSP------GASKDDKSRDNSSEQEKGLRIAWQYKKYFGDDQESTNAI 150
              DP   L  LP+P          D+    +  E +  ++IAW+Y+       E+    
Sbjct: 118 AKEDPADILQKLPAPLIDDSYKKECDEDVCSHKMEPDIKMKIAWRYQLL--PKMEAGPVS 177

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSNFRDRCATFLSQVPR 210
            S++    D   R P +         FF  + +     ++S SL+    +   F+  +  
Sbjct: 178 SSRFGHYYDISKRIPQELIETSKWHGFFLPEKISSAFNVESCSLTPGYMKLLQFIQNIIY 237

Query: 211 NDGNISSAG--------RIAIQSL----------CAPQCDHSNMEWEMLSFLRYLKSMVR 270
            +G   S          RI IQ+L          C   CD S+    +  FL  L+ ++R
Sbjct: 238 KEGFDGSNPQKKQKNILRIGIQNLGSPLWGDDICCTENCDTSH---SLTKFLYILRGLLR 297

Query: 271 SSNAVAVVTFPPSLL-SPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVG 330
           +S +  ++T P  L+ + +   R  +++DT++ +    E     +KE   L   Y+D  G
Sbjct: 298 TSLSACIITMPTHLIQNKAVIARVTNLSDTVVGL----ESFIGSEKETNPL---YKDYHG 357

Query: 331 LLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGS 361
           L+++ ++ ++N  +  I +    + KL+K+ +  +E L+  P D+S   S  S    + S
Sbjct: 358 LIHIRQIPRLNNLIYDISDVKDLAFKLKKKLF-TIERLHLPP-DLSDTVSRSSKQDLAES 405

[Close]

BLAST of MELO3C007703 vs. ExPASy Swiss-Prot
Match: Q5XG58 (Elongator complex protein 4 OS=Xenopus laevis OX=8355 GN=elp4 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.2e-17
Identity = 95/370 (25.68%), Postives = 171/370 (46.22%), Query Frame = 0


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 90
           NG   +S+G+P LD IL GG  +G+L+L+ ED    +  LLL+ F+++G+V    +  AS
Sbjct: 42  NGQLLVSTGVPSLDHILGGGLAVGTLLLIEEDTYGTYSHLLLKYFLAEGVVSGHEVFVAS 101

Query: 91  PSRDPRGFLGTLPSPGASKDDKSRD---------NSSEQEKGLRIAWQYKKYFGDDQEST 150
            + DP   L  LPSP   +  +  D          + + ++ ++IAW+Y+      +  T
Sbjct: 102 ANDDPTETLQDLPSPLTDEVPRQNDPKRTKDTSGPADDSQEMMKIAWRYQNL---PKVET 161

Query: 151 NAIDSKYEFCNDFDLRRPFDRHFFSGKH-VECVSILDSSSLSNFRDRCATF------LSQ 210
             I S   F + +DL +       +  H      I+ ++   N  +    +      + +
Sbjct: 162 LPISSS-RFGHYYDLSKTMPPEMSAKSHRFYLPRIMSANQKQNVSEVTCNYNQLLESIQR 221

Query: 211 VPRNDGNISSAG--------RIAIQSL---------CA---PQCDHSNMEWEMLSFLRYL 270
           V   +G   S          R+ I+SL         C+   P+  HS     +  FL  L
Sbjct: 222 VVHQEGYDGSNPQKRPKTILRLGIESLGSVLWADDICSQERPENQHS-----LTRFLYGL 281

Query: 271 KSMVRSSNAVAVVTFPPSLL-SPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGY 330
           + ++R+S +V V+T P  L+ + + + R + ++DT++ +    E     + E   L   Y
Sbjct: 282 RGLLRTSLSVCVITVPTYLIQNKAITTRLRSLSDTVVGL----ESFIGSEMEANPL---Y 341

Query: 331 QDMVGLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTG 364
           +D  GLL+VH++ ++N+ +    +    + KL KR+   +E L+  P D+S   S  S  
Sbjct: 342 KDYHGLLHVHQIPRLNSLISDGSDTKDLAFKL-KRKIFAIERLHLPP-DLSDTVSRSSKQ 393

[Close]

BLAST of MELO3C007703 vs. ExPASy TrEMBL
Match: A0A1S3B1C3 (elongator complex protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484919 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 5.8e-203
Identity = 362/366 (98.91%), Postives = 362/366 (98.91%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLL 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP    DEDKELAKLLTGYQDMVGLL
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP----DEDKELAKLLTGYQDMVGLL 300

Query: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360
           NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK
Sbjct: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360

Query: 361 TASLEF 367
           TASLEF
Sbjct: 361 TASLEF 362

[Close]

BLAST of MELO3C007703 vs. ExPASy TrEMBL
Match: A0A5A7T0K9 (Elongator complex protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003400 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 5.8e-203
Identity = 362/366 (98.91%), Postives = 362/366 (98.91%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLL 300
           SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP    DEDKELAKLLTGYQDMVGLL
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP----DEDKELAKLLTGYQDMVGLL 300

Query: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360
           NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK
Sbjct: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360

Query: 361 TASLEF 367
           TASLEF
Sbjct: 361 TASLEF 362

[Close]

BLAST of MELO3C007703 vs. ExPASy TrEMBL
Match: A0A0A0KLQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497360 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 6.9e-196
Identity = 349/366 (95.36%), Postives = 354/366 (96.72%), Query Frame = 0


Query: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRT SFSRNFSSAHSSKTPG+KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240
           LS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLL 300
           SNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIP    DEDKELAKLLTGYQDMVGLL
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP----DEDKELAKLLTGYQDMVGLL 300

Query: 301 NVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSK 360
           NVHKVAQ+NTQVPKILEATTFSIKLQKRRYLVLECLNQAP+D SSGSSYGSTGSCSGSSK
Sbjct: 301 NVHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSK 360

Query: 361 TASLEF 367
           TASLEF
Sbjct: 361 TASLEF 362

[Close]

BLAST of MELO3C007703 vs. ExPASy TrEMBL
Match: A0A6J1HHQ8 (elongator complex protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463575 PE=3 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 4.2e-185
Identity = 330/365 (90.41%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDSKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QES NAID KYEFCNDFDLR+PFDRHFFSGKHVECVSILDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQESVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSILDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLLN 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIP    DEDKELA LLTGYQDMVGLLN
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIP----DEDKELANLLTGYQDMVGLLN 302

Query: 302 VHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKT 361
           +HKVAQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSKT
Sbjct: 303 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKT 362

Query: 362 ASLEF 367
            SL+F
Sbjct: 363 GSLDF 363

[Close]

BLAST of MELO3C007703 vs. ExPASy TrEMBL
Match: A0A6J1KLY1 (elongator complex protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111496919 PE=3 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.6e-184
Identity = 327/365 (89.59%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 3   ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 62

Query: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S+EQE
Sbjct: 63  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 122

Query: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 123 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 182

Query: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRSS 241
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLR LKSM+RSS
Sbjct: 183 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMLRSS 242

Query: 242 NAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGLLN 301
           NAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIP    DEDKELA LLTGYQDMVGLLN
Sbjct: 243 NAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIP----DEDKELANLLTGYQDMVGLLN 302

Query: 302 VHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKT 361
           +HKVAQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSK 
Sbjct: 303 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 362

Query: 362 ASLEF 367
            SL+F
Sbjct: 363 GSLDF 363

[Close]

BLAST of MELO3C007703 vs. TAIR 10
Match: AT3G11220.1 (Paxneb protein-related )

HSP 1 Score: 455.3 bits (1170), Expect = 4.7e-128
Identity = 239/367 (65.12%), Postives = 289/367 (78.75%), Query Frame = 0


Query: 1   MAATKPR-TGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R + SFSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 120
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVR 240
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 241 SSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITDEDKELAKLLTGYQDMVGL 300
            SNAVA+VTFPPSLLSPS SKR QHMADTLLS++AIP    D DKEL KLLTGY+D+ G 
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIP----DGDKELEKLLTGYKDINGF 300

Query: 301 LNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSS 360
           LN+HKVA+INTQVP ILEA TFS+ L+KRR+L LECLNQAP+D SSG+SYG++GSC  SS
Sbjct: 301 LNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SS 355

Query: 361 KTASLEF 367
           K+ +L+F
Sbjct: 361 KSGALDF 355

[Close]

BLAST of MELO3C007703 vs. TAIR 10
Match: AT3G11220.2 (Paxneb protein-related )

HSP 1 Score: 442.6 bits (1137), Expect = 3.1e-124
Identity = 238/385 (61.82%), Postives = 289/385 (75.06%), Query Frame = 0


Query: 1   MAATKPR-TGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R + SFSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 120
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSNFRDRCATFLSQVP------------------RNDGNISSAGRIAIQSLCAPQCDHS 240
            LS  +D CATFLS+ P                  +N  NI+S GRIAIQS C+P C++S
Sbjct: 181 DLSIAQDHCATFLSKFPSKFCSSSILFTSLLYFQAQNSSNIASIGRIAIQSFCSPLCEYS 240

Query: 241 NMEWEMLSFLRYLKSMVRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPEIITD 300
             E +MLSF+R LKSM+  SNAVA+VTFPPSLLSPS SKR QHMADTLLS++AIP    D
Sbjct: 241 EKESDMLSFIRLLKSMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIP----D 300

Query: 301 EDKELAKLLTGYQDMVGLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPI 360
            DKEL KLLTGY+D+ G LN+HKVA+INTQVP ILEA TFS+ L+KRR+L LECLNQAP+
Sbjct: 301 GDKELEKLLTGYKDINGFLNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPV 360

Query: 361 DVSSGSSYGSTGSCSGSSKTASLEF 367
           D SSG+SYG++GSC  SSK+ +L+F
Sbjct: 361 DGSSGTSYGTSGSC--SSKSGALDF 373

The following BLAST results are available for this feature:

BLAST of MELO3C007703 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440520.1	1.2e-202	98.91	PREDICTED: elongator complex protein 4 isoform X1 [Cucumis melo] >XP_008440521.1...	[more]
XP_004143437.1	1.4e-195	95.36	elongator complex protein 4 [Cucumis sativus] >XP_031743242.1 elongator complex ...	[more]
XP_038881127.1	1.5e-192	94.54	elongator complex protein 4 [Benincasa hispida]	[more]
XP_022963340.1	8.7e-185	90.41	elongator complex protein 4 isoform X2 [Cucurbita moschata]	[more]
XP_023003256.1	9.6e-184	89.59	elongator complex protein 4 [Cucurbita maxima] >XP_023003257.1 elongator complex...	[more]

BLAST of MELO3C007703 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C778	6.6e-127	65.12	Elongator complex protein 4 OS=Arabidopsis thaliana OX=3702 GN=ELP4 PE=1 SV=1	[more]
Q54XS0	2.3e-23	25.66	Probable elongator complex protein 4 OS=Dictyostelium discoideum OX=44689 GN=elp...	[more]
Q9ER73	1.7e-18	25.15	Elongator complex protein 4 OS=Mus musculus OX=10090 GN=Elp4 PE=1 SV=2	[more]
Q2TBH6	8.5e-18	24.86	Elongator complex protein 4 OS=Bos taurus OX=9913 GN=ELP4 PE=2 SV=1	[more]
Q5XG58	4.2e-17	25.68	Elongator complex protein 4 OS=Xenopus laevis OX=8355 GN=elp4 PE=2 SV=1	[more]

BLAST of MELO3C007703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1C3	5.8e-203	98.91	elongator complex protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484919 P...	[more]
A0A5A7T0K9	5.8e-203	98.91	Elongator complex protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KLQ1	6.9e-196	95.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497360 PE=3 SV=1	[more]
A0A6J1HHQ8	4.2e-185	90.41	elongator complex protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KLY1	4.6e-184	89.59	elongator complex protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111496919 PE=3 SV=...	[more]

BLAST of MELO3C007703 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11220.1	4.7e-128	65.12	Paxneb protein-related	[more]
AT3G11220.2	3.1e-124	61.82	Paxneb protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 18..343 e-value: 4.7E-62 score: 211.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 34..274
IPR008728	Elongator complex protein 4	PFAM	PF05625	PAXNEB	coord: 21..366 e-value: 2.5E-82 score: 276.9
IPR008728	Elongator complex protein 4	PANTHER	PTHR12896	PAX6 NEIGHBOR PROTEIN PAXNEB	coord: 9..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007703.1	MELO3C007703.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	elongator holoenzyme complex