MELO3C007589 (gene) Melon (DHL92) v4

Overview


Name	MELO3C007589
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 3856491 .. 3856941 (+)
RNA-Seq Expression	MELO3C007589
Synteny	MELO3C007589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAGAGAGATGCTAAAAACTGAAATGCCGAATCTAAATTCTCCGGCCATGCCCAACTACCGGATTTCTTCTTTCCTTCTAATCATCCTCTTAATGGCCGCCCCACGCTTCTTTCTTTCTGTAGATTGCAGACCGCTCCGGCCCGGTTCACCGATAGATCGCCACCATGTTCATAATGCCTCTGCTATTCCCCACGACGGCCCGGAAACACAAAAGGCAGCAACGGCGCTGATAGATTCCGGTGGCCGGCGGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAAACCGAGGATCGAACATATTCTTTGCCCATTTCATATTGCCAGATCTAATTTTTTGGCTTTATTCTTTGGGGTTGTAACTTCACTTGTAATATGTACATACATACAATACAAGCTTCTTACTATACA

mRNA sequence

AAACAGAGAGATGCTAAAAACTGAAATGCCGAATCTAAATTCTCCGGCCATGCCCAACTACCGGATTTCTTCTTTCCTTCTAATCATCCTCTTAATGGCCGCCCCACGCTTCTTTCTTTCTGTAGATTGCAGACCGCTCCGGCCCGGTTCACCGATAGATCGCCACCATGTTCATAATGCCTCTGCTATTCCCCACGACGGCCCGGAAACACAAAAGGCAGCAACGGCGCTGATAGATTCCGGTGGCCGGCGGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAAACCGAGGATCGAACATATTCTTTGCCCATTTCATATTGCCAGATCTAATTTTTTGGCTTTATTCTTTGGGGTTGTAACTTCACTTGTAATATGTACATACATACAATACAAGCTTCTTACTATACA

Coding sequence (CDS)

ATGCTAAAAACTGAAATGCCGAATCTAAATTCTCCGGCCATGCCCAACTACCGGATTTCTTCTTTCCTTCTAATCATCCTCTTAATGGCCGCCCCACGCTTCTTTCTTTCTGTAGATTGCAGACCGCTCCGGCCCGGTTCACCGATAGATCGCCACCATGTTCATAATGCCTCTGCTATTCCCCACGACGGCCCGGAAACACAAAAGGCAGCAACGGCGCTGATAGATTCCGGTGGCCGGCGGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAA

Protein sequence

MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAIPHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH

Homology

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BLAST of MELO3C007589 vs. NCBI nr
Match: TYK12856.1 (hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa])

HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAI 60
           MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAI
Sbjct: 1   MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAI 60

Query: 61  PHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 105
           PHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH
Sbjct: 61  PHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 104

[Close]

BLAST of MELO3C007589 vs. NCBI nr
Match: KAE8647506.1 (hypothetical protein Csa_003725 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 4.2e-36
Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 1   MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVH-NASA 60
           M  TEMPNL SP M N RISSFLLII L+AAPRFFL VDCRPLRPGSPIDRHHVH NASA
Sbjct: 1   MPHTEMPNLYSPPMLNPRISSFLLIIFLIAAPRFFLYVDCRPLRPGSPIDRHHVHDNASA 60

Query: 61  IPHDG-PETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 105
           +PH+  PETQKAATA IDSG   IGDEGGGVAFTMASGPSRKGAGH
Sbjct: 61  LPHNAPPETQKAATAPIDSGAPPIGDEGGGVAFTMASGPSRKGAGH 106

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BLAST of MELO3C007589 vs. NCBI nr
Match: KAG6604156.1 (hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-17
Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 8   NLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAIPHDGPET 67
           NLNSPAMP  + SS LLI++LMAA RF   VDCRPLR GS I+    +N SAI      +
Sbjct: 5   NLNSPAMPKMKNSSLLLIMVLMAATRFLPLVDCRPLRSGSTIEHQRTNNGSAI----SSS 64

Query: 68  QKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 105
           + AA++  DSG R  GD  GGVAFT+ASGPSRKGAGH
Sbjct: 65  EIAASSPEDSGSRSSGD--GGVAFTLASGPSRKGAGH 95

[Close]

BLAST of MELO3C007589 vs. NCBI nr
Match: KAG6595007.1 (hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10
Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 14  MPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAIPHDGPETQKAATA 73
           M N + SS LLI+ L+AA  F L VD RPLR GS    H ++N SA+  + PET  AA+ 
Sbjct: 1   MANVKSSSLLLIVALIAATGFVLLVDGRPLRSGSTNQSHPINNGSALA-EKPET-AAASP 60

Query: 74  LIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 105
             DS   + G  GGGV FT+ SGPSRKGAGH
Sbjct: 61  TSDSDIHQSGGGGGGVVFTLVSGPSRKGAGH 89

[Close]

BLAST of MELO3C007589 vs. ExPASy TrEMBL
Match: A0A5D3CR30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004480 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.6e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAI 60
           MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAI
Sbjct: 1   MLKTEMPNLNSPAMPNYRISSFLLIILLMAAPRFFLSVDCRPLRPGSPIDRHHVHNASAI 60

Query: 61  PHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 105
           PHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH
Sbjct: 61  PHDGPETQKAATALIDSGGRRIGDEGGGVAFTMASGPSRKGAGH 104

The following BLAST results are available for this feature:

BLAST of MELO3C007589 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12856.1	1.8e-50	100.00	hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]	[more]
KAE8647506.1	4.2e-36	83.02	hypothetical protein Csa_003725 [Cucumis sativus]	[more]
KAG6604156.1	4.4e-17	59.79	hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595007.1	3.1e-10	52.75	hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C007589 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C007589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CR30	8.6e-51	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C007589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007589.1	MELO3C007589.1	mRNA