MELO3C007508 (gene) Melon (DHL92) v4

Overview


Name	MELO3C007508
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Cold-regulated 413 plasma membrane protein 2-like protein
Location	chr08: 3217389 .. 3219588 (-)
RNA-Seq Expression	MELO3C007508
Synteny	MELO3C007508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAACTTATTACACTTTTTCAAGATGAAGGAAAAAAAAAATAGATGCATGAAATCCTAAAGATAGAGCTCATGGAGAATTAAATGGCCAAAGAAAAGGAAAAATTAGAAGTAAGGATATGAATATAGAAGATGGACCAAGCAAGCGGAGAATTTGGGTGAGACAGTCAAACCGAAAACTAATCTGATCCGAAACTTCATACCCTTTTTTTTTTTTCTTTTTCATTCTCTAACACTAACTCTGCTGAAAACAAGGAGCCTGACCAATCCCCGTTACATTTTCCTATTACTCAGTTCTTCTCGATTTTAAACTATAAAATGCATTCTAGGTGTTTGTATAAATGCCGCACTGGCTCTTGTTTCCCAAAGCTTTCTCATTTTTCGTTTCCTTGTAGACCCAGAAGCAAAAATGGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTATTGAACATGCCACCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTTCAAATGGCTCGCTTCCTTTGCTGCCATGTGGGTGCTTTATTTCTAATGTAAGGGCTTTTGTTTTGTTTCTGACATTCTAAAATTTAACATCATCCTGCAGTTACTTGTTGATTTTGGATCGTACGAACTGGAGAACAAATATGCTTACTTCACTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTCAAGGGATTTTTAACTTATTGAGGTGATACTAACTCTGATTTCCTTGTTGGTTTAATTTTTAAGCTTTATCCAAAGGTATTTGAATGTTAACTAATATTGTGTTTCTTCTTGATTTTCTTAAGAGGGGATGTTGGGAAATGGATTGCTTTCGTTGCAGTGGTATTGAGGCTCTTCTTTCCGCGACATTTCCCAGGTAAGCACCATCATTATTTGTTTAGTTTTCCACCACTTTTCTTGTCGATCGGTATCATGTCGCTGTGTATAATAAAGGGTTGTTTTGAATTTATAATACATTTCAATCATTAACTACAAAAAGGTATTTGTCAATCAGTACAACCTTGTATTTGTTGAGGTGACATGATGAATTATTTAAACTTGGCTTAGCGAGTGGTTGATAGAGAATGTGGCTTTGATAGTTGACATACTAATGAAAGAACAAGCTTTAGGTTTAAGAATGTTTTTCCTCTCTCTAAACTTTTGATAATTTTGCCTCTTTTGACCGGTAGTCTCTCCCTTTTTGATCCCTTAGACCATGTTAGGTAATTATTTGATTTTTTTTCCTTTTTCTGAAGATTGGACTTGTAAACACTTATTCACCTTCTAAACATTTTGTTTACTATCTACCTTTTACTAATATTTTCAAAAATCAAGTCAAGTTTTTTGAAAAGTAAAAACAAGTTTTTGTCTTTAGAGTTTGACTAAGAATTAGCTCTTTTACTTCAAAAAGATGCAAAGCATTATGAAAGTTTGGATGAAAATAGCCTTAATTTTCAAAAACTAACTAATTACCAAACGAAACATTAACTTGTAGAACCACATTTTCAAATTTGAAGCACTGCTGATCTTGGTCAATGTGATATGTCATAAACAGTCCGAGCTATGATTAACTTGGTCCTATCTTCAATAGTTCGTTGCAACAAAAAAATGAATTGAAGTTGGGTTTTTGCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACCTTGAGAGACCACTGGGCTGGGGTACTGATATGTTTGATAATTGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTTTTACTCAAACTCATGGAATTTCCAATACCATTGGAATCGTCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAGCTCTCTATACAACTCTCTCCCTTCCCATTTCTTCAATTTTGCAGCTCTCCCTTTGCAAAACTGAAGTAAAAGATTTTGTAACTTCTTTGTTCTTTTCTTTGTAGCCCTCTTTATCTATATATCATCAATATGAGAAATTGAGTTTTTGTTGTTCTACTTTTGATTCATTTTCCAAATAAGACTATTGCAGAGCGTAGGTTTAGAAGTTATATTTTGTAAAAGGATTAATTTAGACTATGATAAAATTAGCGGT

mRNA sequence

TTAAAACTTATTACACTTTTTCAAGATGAAGGAAAAAAAAAATAGATGCATGAAATCCTAAAGATAGAGCTCATGGAGAATTAAATGGCCAAAGAAAAGGAAAAATTAGAAGTAAGGATATGAATATAGAAGATGGACCAAGCAAGCGGAGAATTTGGACCCAGAAGCAAAAATGGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTATTGAACATGCCACCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTTCAAATGGCTCGCTTCCTTTGCTGCCATAGGGGATGTTGGGAAATGGATTGCTTTCGTTGCAGTGGTATTGAGGCTCTTCTTTCCGCGACATTTCCCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACCTTGAGAGACCACTGGGCTGGGGTACTGATATGTTTGATAATTGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTTTTACTCAAACTCATGGAATTTCCAATACCATTGGAATCGTCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAGCTCTCTATACAACTCTCTCCCTTCCCATTTCTTCAATTTTGCAGCTCTCCCTTTGCAAAACTGAAGTAAAAGATTTTGTAACTTCTTTGTTCTTTTCTTTGTAGCCCTCTTTATCTATATATCATCAATATGAGAAATTGAGTTTTTGTTGTTCTACTTTTGATTCATTTTCCAAATAAGACTATTGCAGAGCGTAGGTTTAGAAGTTATATTTTGTAAAAGGATTAATTTAGACTATGATAAAATTAGCGGT

Coding sequence (CDS)

ATGGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTATTGAACATGCCACCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTTCAAATGGCTCGCTTCCTTTGCTGCCATAGGGGATGTTGGGAAATGGATTGCTTTCGTTGCAGTGGTATTGAGGCTCTTCTTTCCGCGACATTTCCCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACCTTGAGAGACCACTGGGCTGGGGTACTGATATGTTTGATAATTGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTTTTACTCAAACTCATGGAATTTCCAATACCATTGGAATCGTCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAG

Protein sequence

MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAIGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGISNTIGIVLLLVFPVWAMVARFF

Homology

[Close]

BLAST of MELO3C007508 vs. NCBI nr
Match: XP_008440182.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo] >XP_008440183.1 PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo] >TYK12936.1 cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 321.6 bits (823), Expect = 3.9e-84
Identity = 166/202 (82.18%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GDVGKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 180

[Close]

BLAST of MELO3C007508 vs. NCBI nr
Match: XP_004142025.1 (cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN48465.1 hypothetical protein Csa_002903 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82
Identity = 161/202 (79.70%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRMAYLALNSDPLMEELINSDIHELKIAATRL+EHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVATPGFFAHTLRDHWAGV+ICLIIGCYLLQEHIRASGGFRNS TQTHGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVVICLIIGCYLLQEHIRASGGFRNSLTQTHGI 180

[Close]

BLAST of MELO3C007508 vs. NCBI nr
Match: XP_038883183.1 (cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 159/202 (78.71%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRMAYLALNSDPLMEELINSDI+ELKIAATRL+EHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMAYLALNSDPLMEELINSDINELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFDLLRGDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNS TQTHGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSLTQTHGI 180

[Close]

BLAST of MELO3C007508 vs. NCBI nr
Match: XP_022133246.1 (cold-regulated 413 plasma membrane protein 2-like [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 149/202 (73.76%), Postives = 158/202 (78.22%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRM YLALNSDPLMEE INSDI+ELKIAATRL+EHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMPYLALNSDPLMEESINSDINELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                               D GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFDLLREDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILL+VA PGFFAHTL+DHWAGV+ICL+IGCYLLQEHIRASGGFRNS TQ+HGI
Sbjct: 121 LEIPGSLILLVVAAPGFFAHTLKDHWAGVVICLVIGCYLLQEHIRASGGFRNSLTQSHGI 180

[Close]

BLAST of MELO3C007508 vs. NCBI nr
Match: KAG7027084.1 (Cold-regulated plasma membrane protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 147/202 (72.77%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRM YLALNSDPL++E++NSD +ELKIAATRLI HA KLGGKGLGTSFFKWLASFAAI 
Sbjct: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVA PGFF H+LRDH AGV+ICLIIGCYLLQEHIRASGGFRNS TQ+HGI
Sbjct: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202

[Close]

BLAST of MELO3C007508 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.2e-57
Identity = 115/201 (57.21%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   MGRMAYLALNSDPL-MEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI 60
           MGRM YLA+ +D +    L+NSD+ ELK+AA +L    +KLGG G G SF K+LASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  ------------------------------------GDVGKWIAFVAVVLRLFFPRHFPD 120
                                               GDVGKWIAFVAVVLRLFFP+HFPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHG 165
           WLE+PGSLILLLV +P F AH +R  W G +I L IGCYLLQEHIRASGGFRNSFTQ  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

[Close]

BLAST of MELO3C007508 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-45
Identity = 93/202 (46.04%), Postives = 121/202 (59.90%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGR  +LA+ ++     LINSD++E   AA +L++    LGG G GTS  +W AS  AI 
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIA +A+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIP +LIL++V +P   A TLR+ W G +ICL+I CYL  EHI+ASGGF+NSFTQ +GI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

[Close]

BLAST of MELO3C007508 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.7e-43
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 10  NSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI---------- 69
           N    ++ +I SD +EL IAA  L  HA  L G G GTS  +W+AS AAI          
Sbjct: 8   NDHGTLKAMIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNW 67

Query: 70  --------------------------GDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLIL 129
                                     G++GKWIAFVAVV++LFFP+H  ++LE+P +L+L
Sbjct: 68  KTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVL 127

Query: 130 LLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGISNTIGIVLL 163
           L V  P   A T RD W G+ ICL IGCYLLQEHIRASGGFRN+FT+ +GISNT+GI+ L
Sbjct: 128 LAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICL 187

[Close]

BLAST of MELO3C007508 vs. ExPASy Swiss-Prot
Match: O64834 (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.6e-19
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 62  VGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRD--HWAGVLICLII 121
           VGKWIA + V+LRLF P HF + LEIPG+ ILL+V TP       RD   + G  +CL+ 
Sbjct: 81  VGKWIALLTVILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLT 140

Query: 122 GCYLLQEHIRASGGFRNSFTQTHGISNTIGIVLLLVFPVWAMVARFF 167
             YL+ +H +A GG +NSFTQ   ++ +I + +L V+P+ +  A  F
Sbjct: 141 SFYLINKHTKACGGIKNSFTQKDKVTYSICLWILFVYPILSSFAALF 187

[Close]

BLAST of MELO3C007508 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.0e-07
Identity = 30/92 (32.61%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 60  GDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLII 119
           G+ G W AF+A++ RLFF   FP  LE+P   +LL++  P +   ++R    G ++ L I
Sbjct: 128 GEYGIWAAFLALLTRLFF--SFPVELELPFIALLLVIVAP-YQVMSIRGKQEGAILSLAI 187

Query: 120 GCYLLQEHIRASGGFRNSFTQTHGISNTIGIV 152
            C+L  +H   +G  + +F Q + +  T+ I+
Sbjct: 188 SCFLAFQHFSRAGTLQKAFDQ-NSVLATVAII 215

[Close]

BLAST of MELO3C007508 vs. ExPASy TrEMBL
Match: A0A1S3B0J4 (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103484724 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 166/202 (82.18%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GDVGKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 180

[Close]

BLAST of MELO3C007508 vs. ExPASy TrEMBL
Match: A0A5D3CRA7 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005310 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 166/202 (82.18%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GDVGKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 180

[Close]

BLAST of MELO3C007508 vs. ExPASy TrEMBL
Match: A0A0A0KFI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488350 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 161/202 (79.70%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRMAYLALNSDPLMEELINSDIHELKIAATRL+EHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVATPGFFAHTLRDHWAGV+ICLIIGCYLLQEHIRASGGFRNS TQTHGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVVICLIIGCYLLQEHIRASGGFRNSLTQTHGI 180

[Close]

BLAST of MELO3C007508 vs. ExPASy TrEMBL
Match: A0A6J1BUH1 (cold-regulated 413 plasma membrane protein 2-like OS=Momordica charantia OX=3673 GN=LOC111005887 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.5e-76
Identity = 149/202 (73.76%), Postives = 158/202 (78.22%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRM YLALNSDPLMEE INSDI+ELKIAATRL+EHATKLGGKGLGTSFFKWLASFAAI 
Sbjct: 1   MGRMPYLALNSDPLMEESINSDINELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                               D GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFDLLREDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILL+VA PGFFAHTL+DHWAGV+ICL+IGCYLLQEHIRASGGFRNS TQ+HGI
Sbjct: 121 LEIPGSLILLVVAAPGFFAHTLKDHWAGVVICLVIGCYLLQEHIRASGGFRNSLTQSHGI 180

[Close]

BLAST of MELO3C007508 vs. ExPASy TrEMBL
Match: A0A6J1KS22 (cold-regulated 413 plasma membrane protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496737 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 147/202 (72.77%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGRM YLALNSDPL++E++NSD +ELKIAATRLI HA KLGGKGLGTSFFKWLASFAAI 
Sbjct: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIPGSLILLLVA PGFF H+LRDH AGV+ICLIIGCYLLQEHIRASGGFRNS TQ+HGI
Sbjct: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202

[Close]

BLAST of MELO3C007508 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-58
Identity = 115/201 (57.21%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   MGRMAYLALNSDPL-MEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI 60
           MGRM YLA+ +D +    L+NSD+ ELK+AA +L    +KLGG G G SF K+LASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  ------------------------------------GDVGKWIAFVAVVLRLFFPRHFPD 120
                                               GDVGKWIAFVAVVLRLFFP+HFPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHG 165
           WLE+PGSLILLLV +P F AH +R  W G +I L IGCYLLQEHIRASGGFRNSFTQ  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

[Close]

BLAST of MELO3C007508 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 184.1 bits (466), Expect = 9.1e-47
Identity = 93/202 (46.04%), Postives = 121/202 (59.90%), Query Frame = 0


Query: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI- 60
           MGR  +LA+ ++     LINSD++E   AA +L++    LGG G GTS  +W AS  AI 
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  -----------------------------------GDVGKWIAFVAVVLRLFFPRHFPDW 120
                                              GD GKWIA +A+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 167
           LEIP +LIL++V +P   A TLR+ W G +ICL+I CYL  EHI+ASGGF+NSFTQ +GI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

[Close]

BLAST of MELO3C007508 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 10  NSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI---------- 69
           N    ++ +I SD +EL IAA  L  HA  L G G GTS  +W+AS AAI          
Sbjct: 8   NDHGTLKAMIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNW 67

Query: 70  --------------------------GDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLIL 129
                                     G++GKWIAFVAVV++LFFP+H  ++LE+P +L+L
Sbjct: 68  KTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVL 127

Query: 130 LLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGISNTIGIVLL 163
           L V  P   A T RD W G+ ICL IGCYLLQEHIRASGGFRN+FT+ +GISNT+GI+ L
Sbjct: 128 LAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICL 187

[Close]

BLAST of MELO3C007508 vs. TAIR 10
Match: AT2G15970.2 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 104.4 bits (259), Expect = 9.1e-23
Identity = 59/147 (40.14%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 10  NSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAI---------- 69
           N    ++ +I SD +EL IAA  L  HA  L G G GTS  +W+AS AAI          
Sbjct: 8   NDHGTLKAMIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNW 67

Query: 70  --------------------------GDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLIL 121
                                     G++GKWIAFVAVV++LFFP+H  ++LE+P +L+L
Sbjct: 68  KTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVL 127

[Close]

BLAST of MELO3C007508 vs. TAIR 10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-20
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 62  VGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRD--HWAGVLICLII 121
           VGKWIA + V+LRLF P HF + LEIPG+ ILL+V TP       RD   + G  +CL+ 
Sbjct: 81  VGKWIALLTVILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLT 140

Query: 122 GCYLLQEHIRASGGFRNSFTQTHGISNTIGIVLLLVFPVWAMVARFF 167
             YL+ +H +A GG +NSFTQ   ++ +I + +L V+P+ +  A  F
Sbjct: 141 SFYLINKHTKACGGIKNSFTQKDKVTYSICLWILFVYPILSSFAALF 187

The following BLAST results are available for this feature:

BLAST of MELO3C007508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440182.1	3.9e-84	82.18	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo] >XP_...	[more]
XP_004142025.1	2.8e-82	79.70	cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN48465.1 hypot...	[more]
XP_038883183.1	3.1e-81	78.71	cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]	[more]
XP_022133246.1	5.1e-76	73.76	cold-regulated 413 plasma membrane protein 2-like [Momordica charantia]	[more]
KAG7027084.1	2.8e-74	72.77	Cold-regulated plasma membrane protein 2 [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of MELO3C007508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVL6	4.2e-57	57.21	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23164	1.3e-45	46.04	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	2.7e-43	48.15	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O64834	4.6e-19	43.93	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
F4I1G5	9.0e-07	32.61	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of MELO3C007508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0J4	1.9e-84	82.18	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3CRA7	1.9e-84	82.18	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A0A0KFI4	1.4e-82	79.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488350 PE=3 SV=1	[more]
A0A6J1BUH1	2.5e-76	73.76	cold-regulated 413 plasma membrane protein 2-like OS=Momordica charantia OX=3673...	[more]
A0A6J1KS22	1.4e-74	72.77	cold-regulated 413 plasma membrane protein 2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of MELO3C007508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50830.1	3.0e-58	57.21	cold-regulated 413-plasma membrane 2	[more]
AT4G37220.1	9.1e-47	46.04	Cold acclimation protein WCOR413 family	[more]
AT2G15970.1	1.9e-44	48.15	cold regulated 413 plasma membrane 1	[more]
AT2G15970.2	9.1e-23	40.14	cold regulated 413 plasma membrane 1	[more]
AT2G23680.1	3.3e-20	43.93	Cold acclimation protein WCOR413 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 15..59 e-value: 1.9E-8 score: 34.5 coord: 60..153 e-value: 7.0E-49 score: 166.3
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 60..165 coord: 1..59
None	No IPR available	PANTHER	PTHR33596:SF20	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2-LIKE	coord: 60..165 coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007508.1	MELO3C007508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane