MELO3C007489 (gene) Melon (DHL92) v4

Overview


Name	MELO3C007489
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ubiquitin-conjugating enzyme family protein
Location	chr08: 3071301 .. 3075100 (-)
RNA-Seq Expression	MELO3C007489
Synteny	MELO3C007489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACCAGAGTCCAATCGAAGCCTAACTTTTTATTTGTTGACCTCCGTAGGGCTCACCCACGCTCGCCAAACCGCCCACCTTCCTCTCTCCCTCTCCATTTCCATTCTCTTTCACGCCTCTGCAACTCAGACCTATCTCCTCTCTCCTCTTCACAGGTTTGATTTCTTCACAGCCCCTTTTTCCTTTTCGATTTTGGGTTTTCTTCCTATTTCTTGCTCCCTTTCACTTCTTGTTCCGAAGGATTGCTGTTTATCGCCTTTTTTCTTCATTGATTCTGTCTTCTCTATTGGGTCTTTGGAATATCGGCTCTGGATTGTTTTCTTGTAATTAGAGAGTAATTATGTTTTGATTACTCGCGGAATCGCATTGTAATTGTGTTGGCTCTGGTTTCAACTTTTTTTTTTTTCGTTTTATAACTCAAGATTTGAATGTTCTTATTTGTCTGGGACGATTTCTAGTGTTGGGATTGTGGATAATATGATTAGTTTCCATTCGAGTGTTTTCTTTGTGGATTATGTCCGGTGGGTTTTGTTGGTATGTTCGATTCTAAGTGGCATGTTCTTTGTTGAGAGGTTTTGGGAGGATCAAGAATCTCAACCCTTTTGACTTTTTTGTTTGCCATGGAGATTTAGTTTGGGTTTCTATAGTCAATTCGGAATTGGGTTTATGTTGGATCTTAGTGATGTCACAAGTCCATGACTCAGCTGTGTGCTTGAAGAGGTTTTGTTTGAACGCATCCGCTCTTTCCTGGAAGATGCAGATTGCCTTCATAGGCTGTTCTCTTTATTTTGTTGTAAAATTTTTCATTCGAGAGGATCGGAAGGGTTTTTGAAGGTTTGGAGGGAGGGAGACTTATTTTTATTTCTCTAATTGGATTTCCTTAAATAAGTTGTTTAGTAAACTCTCCCTCTTTCTCTCTCATAAATAACATTCAGCTAGGGCTCATTTTTCTTGATGCTGTTATGGTATTAGTAGCCTATTCTATGGTGGTTTGATCTTGTTTTTTCGTGGCATATTTGTGTTGTTTCATTCTTGTCATTGAAATTTGGTTTCTTATCCTTAGAGGTAATTTTTTGAAATAGCATAACATTTGCAAGGGGTGTAATTGCATATTCTGCTGCAGGAGATATGATTAAGCTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTACAAAGAAGCAAAGTGCTGGGGAACTGCGTCTTCATAAAGGTTGGGTTATTAATAGGGTTTATTGAAAACTTGGTCTCGTTAGAGGTGATGAGTTGTTTGAAACTATATCAATTTGGTTTCCCATATATGAGTAATGATTATGGGTCATACATTTGAAGGTTTTTTTTTTTCTGTGGATTAGGCATTGTCACGCCAGTCATTTAGTATGATATATTGCGAACTTTAGTATATTTTTTATAATCTAATTTCTTTTTGATTGGTTTGAGACTTGAAGACTTCATGTACAAACAAGATGTCTTATATGCAAATACCATGTTTCCCCGTATGTGTCACATCCACATATGATAGTATATAATTATTTTATGTTTACAAGGATCCTGAGTTTATATAGAGACAGATATCCGGTCTGCATTTTCCATCCTCTTGATTTGCTTGTCCTGGCTAGGAGTCAACTGGAATGTTCGAGTGCATTAGAATTTTCATGTATCATGGTCCTAGGCTAACCTCCATTGAATTTTATATTATTATTTGATTGTTTAGACAAGATTTTCATAGGTAATTTTGTGGTAGATATTGATTGGAATTTAAATTTATCTGTGAAAAATTTTGAGATACATGGTAATTGGTGCTTGAGAACACAAAGGTTCTATAACTTTGCTTGATGTGTGATGAAATGAGGAGTGAACCCAAAACTATCTTTCCAGTTATAAGATTGTTGGCCAATAGAAGTGAATTTTGATCTCTTCCCTTAATTTAATCATGAAAGAACCTTGCCACAGTTCAACTGAGATATGTGTTATTAAATCAATTCACTTGATCGGTACTGGAAATTTTGCTGGTCTTGTGAAAAAGGCGTTTCATCCCAAGACATTATCTGTTTCTAAGATGTTAATGAAGTTTGTGATCATATATGATGTCGTCTTATCACATTTAGTAATGTTGGGTTGGGGGCATGATGTCCCAAAGAATCTTGATAGCTAAAAAAAACATGATTGTAGATGCCCTGGAGTGATCTATTTTGCATGTTTTTCTTATTTCTGTTCATGTATTCTAATTTGAGGGAGAGCTACTTGATAGTTAGTTATGTTGGTGCTTAATCTGTTACAGATATTAGTGAGCTGAATCTACCAAAATCGTGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCTGACGAGGGATATTATTTGTAAGTATTCTCTTTTCTCCTATGTTCACACTCATGCAATCTCTTATGGTGTGGAGAATACTTTCCTCGCCTTGTTAATTTATTTCATCTAAACGTCTTAACTCTGAACCAGAAATAAAAATGGAAACTAACACAAAATATTCTTGATATATAGAAAGAAAATTGTAAGTTTCCAATCAGTTCAGGAGCATTGTACTCTCCCACAGACTAATTCTAGAAAATTGCTAATCCCAAATTCTCTTGCTCCATCTGTTTATGCCTTCCGGCTTTCCTAATAATAATTTTCTCAATGTTTACATACAAATATTCCTAACAGCTCGCTTTTCACAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCACCGAAAGTCAAGTGCAAGACAAAGGTAAACCTGAGTGGCTTCTTACCCACAGCATTTGATCCTTTCAGTATAGAAAGCCTAAGGGAATATTCTCTATATAGTGATTACTTATACTTTATGCAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATTTGTTCACGGTATGAACAAAGCATGATTAGTAAATGGTTGCAGTATGATGAACTTTTAACATCATAAGCTGACCCCTTACCTTGTTTTGGCGATGTCCTACCAGGAACCAAATGATGAAGACCCACTGAATCATGAAGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTATGTGGGGCAGACCTTTTTCGCACGATGTATGTAACTCACTCTTTATCCTTCACGTTCATCTTTTCCTGCGCTGTATGTAGCTAGCTTTTGTCTCTTGGTACATTAAGTGCTTATTTAGAAATATCCCATCCATTCACCTACGTTTGTGTTAGCCCAATGAACTTAGTGGTATTAATGTGTATCATTTCTATATTGTCAATTAACATGGTTATATTTTCCTCAATATTTTGGATGGAAGCCATGGCAATAGGGGCTGGCATAGTCTTTCAATCCTGATTTTGTTTAGAGAACTTCCAAATTTGTCTCATTCATCATCCCTATGCTATGCCTCGGCCTACTTCTGGCCGTTTGTTTGATATTCAAAAAGGAAGCTGCCAAGGGAGGAATGCTTAGGTAATGATGTTCCATGTGGTTCTTGTATTCTTTGGAATTTGGATCCCCACCCACCAATTCTTAAGTTGGAAAGATGATAGAGGATTGAATTAGTGAAAATAATCTTCTCTAAGTCTGTAGGATCAGATGAGATGTGATATCAATCGAATTATGAATAAATT

mRNA sequence

CTACCAGAGTCCAATCGAAGCCTAACTTTTTATTTGTTGACCTCCGTAGGGCTCACCCACGCTCGCCAAACCGCCCACCTTCCTCTCTCCCTCTCCATTTCCATTCTCTTTCACGCCTCTGCAACTCAGACCTATCTCCTCTCTCCTCTTCACAGGAGATATGATTAAGCTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTACAAAGAAGCAAAGTGCTGGGGAACTGCGTCTTCATAAAGATATTAGTGAGCTGAATCTACCAAAATCGTGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCTGACGAGGGATATTATTTGTAAGTATTCTCTTTTCTCCTATGTTCACACTCATGCAATCTCTTATGGTGTGGAGAATACTTTCCTCGCCTTGTTAATTTATTTCATCTAAACGTCTTAACTCTGAACCAGAAATAAAAATGGAAACTAACACAAAATATTCTTGATATATAGAAAGAAAATTGTAAGTTTCCAATCAGTTCAGGAGCATTGTACTCTCCCACAGACTAATTCTAGAAAATTGCTAATCCCAAATTCTCTTGCTCCATCTGTTTATGCCTTCCGGCTTTCCTAATAATAATTTTCTCAATGTTTACATACAAATATTCCTAACAGCTCGCTTTTCACAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCACCGAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATTTGTTCACGGAACCAAATGATGAAGACCCACTGAATCATGAAGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTATGTGGGGCAGACCTTTTTCGCACGATGTATGTAACTCACTCTTTATCCTTCACGTTCATCTTTTCCTGCGCTGTATGTAGCTAGCTTTTGTCTCTTGGTACATTAAGTGCTTATTTAGAAATATCCCATCCATTCACCTACGTTTGTGTTAGCCCAATGAACTTAGTGGTATTAATGTGTATCATTTCTATATTGTCAATTAACATGGTTATATTTTCCTCAATATTTTGGATGGAAGCCATGGCAATAGGGGCTGGCATAGTCTTTCAATCCTGATTTTGTTTAGAGAACTTCCAAATTTGTCTCATTCATCATCCCTATGCTATGCCTCGGCCTACTTCTGGCCGTTTGTTTGATATTCAAAAAGGAAGCTGCCAAGGGAGGAATGCTTAGGTAATGATGTTCCATGTGGTTCTTGTATTCTTTGGAATTTGGATCCCCACCCACCAATTCTTAAGTTGGAAAGATGATAGAGGATTGAATTAGTGAAAATAATCTTCTCTAAGTCTGTAGGATCAGATGAGATGTGATATCAATCGAATTATGAATAAATT

Coding sequence (CDS)

ATGCCTTCCGGCTTTCCTAATAATAATTTTCTCAATGTTTACATACAAATATTCCTAACAGCTCGCTTTTCACAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCACCGAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATTTGTTCACGGAACCAAATGATGAAGACCCACTGAATCATGAAGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTATGTGGGGCAGACCTTTTTCGCACGATGTATGTAA

Protein sequence

MPSGFPNNNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM

Homology

[Close]

BLAST of MELO3C007489 vs. NCBI nr
Match: XP_008440154.1 (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis melo] >TYK12954.1 NEDD8-conjugating enzyme Ubc12 [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.3e-60
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM
Sbjct: 132 GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 183

[Close]

BLAST of MELO3C007489 vs. NCBI nr
Match: XP_011657802.1 (NEDD8-conjugating enzyme Ubc12 [Cucumis sativus] >KGN48442.1 hypothetical protein Csa_003001 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 6.2e-59
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCM 183

[Close]

BLAST of MELO3C007489 vs. NCBI nr
Match: XP_022950886.1 (NEDD8-conjugating enzyme Ubc12-like [Cucurbita moschata] >XP_022950887.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita moschata] >XP_023543062.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita pepo subsp. pepo] >XP_023543063.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF+RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFSRCM 183

[Close]

BLAST of MELO3C007489 vs. NCBI nr
Match: XP_038883862.1 (NEDD8-conjugating enzyme Ubc12 [Benincasa hispida] >XP_038883863.1 NEDD8-conjugating enzyme Ubc12 [Benincasa hispida])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCM 183

[Close]

BLAST of MELO3C007489 vs. NCBI nr
Match: XP_022978343.1 (NEDD8-conjugating enzyme Ubc12-like [Cucurbita maxima] >XP_022978344.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-58
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGY+GQTFF+RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYMGQTFFSRCM 183

[Close]

BLAST of MELO3C007489 vs. ExPASy Swiss-Prot
Match: Q9SDY5 (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 7.8e-57
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 73  YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 132

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL+HLFTEPN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RC+
Sbjct: 133 GLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184

[Close]

BLAST of MELO3C007489 vs. ExPASy Swiss-Prot
Match: Q9ZU75 (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=RCE2 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.0e-53
Identity = 103/136 (75.74%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 5   FPN--NNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDL 64
           FPN  N+ +N  + I     +   Y  G F FSF VS +YPHEAPKVKCKTKVYHPNIDL
Sbjct: 53  FPNGKNDLMNFEVTIKPDEGY---YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDL 112

Query: 65  EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRR 124
           EGNVCLNILREDWKPVLNINTVIYGL+HLFTEPN EDPLNHEAAAVLRDNPK FE NVRR
Sbjct: 113 EGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRR 172

Query: 125 AMAGGYVGQTFFARCM 139
           AM GG VGQT F RCM
Sbjct: 173 AMMGGQVGQTSFPRCM 185

[Close]

BLAST of MELO3C007489 vs. ExPASy Swiss-Prot
Match: Q6DCZ9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.4e-44
Identity = 79/112 (70.54%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y+GG F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN++IY
Sbjct: 71  YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIY 130

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL +LF EPN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+
Sbjct: 131 GLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182

[Close]

BLAST of MELO3C007489 vs. ExPASy Swiss-Prot
Match: Q6P8D9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.4e-44
Identity = 79/112 (70.54%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y+GG F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN++IY
Sbjct: 71  YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIY 130

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL +LF EPN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+
Sbjct: 131 GLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182

[Close]

BLAST of MELO3C007489 vs. ExPASy Swiss-Prot
Match: A3KN22 (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-43
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y+ G F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN++IY
Sbjct: 71  YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIY 130

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL +LF EPN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+
Sbjct: 131 GLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182

[Close]

BLAST of MELO3C007489 vs. ExPASy TrEMBL
Match: A0A5D3CPJ2 (NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005500 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-60
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM
Sbjct: 132 GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 183

[Close]

BLAST of MELO3C007489 vs. ExPASy TrEMBL
Match: A0A1S3B168 (NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo OX=3656 GN=LOC103484703 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-60
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM
Sbjct: 132 GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 183

[Close]

BLAST of MELO3C007489 vs. ExPASy TrEMBL
Match: A0A0A0KJ88 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487630 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.0e-59
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCM 183

[Close]

BLAST of MELO3C007489 vs. ExPASy TrEMBL
Match: A0A6J1GG19 (NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita moschata OX=3662 GN=LOC111453848 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.1e-59
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF+RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFSRCM 183

[Close]

BLAST of MELO3C007489 vs. ExPASy TrEMBL
Match: A0A6J1ISU1 (NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita maxima OX=3661 GN=LOC111478368 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGY+GQTFF+RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYMGQTFFSRCM 183

[Close]

BLAST of MELO3C007489 vs. TAIR 10
Match: AT4G36800.1 (RUB1 conjugating enzyme 1 )

HSP 1 Score: 221.1 bits (562), Expect = 5.6e-58
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 73  YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 132

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL+HLFTEPN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RC+
Sbjct: 133 GLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184

[Close]

BLAST of MELO3C007489 vs. TAIR 10
Match: AT4G36800.2 (RUB1 conjugating enzyme 1 )

HSP 1 Score: 221.1 bits (562), Expect = 5.6e-58
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 73  YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 132

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL+HLFTEPN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RC+
Sbjct: 133 GLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184

[Close]

BLAST of MELO3C007489 vs. TAIR 10
Match: AT2G18600.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 207.6 bits (527), Expect = 6.4e-54
Identity = 103/136 (75.74%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 5   FPN--NNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDL 64
           FPN  N+ +N  + I     +   Y  G F FSF VS +YPHEAPKVKCKTKVYHPNIDL
Sbjct: 53  FPNGKNDLMNFEVTIKPDEGY---YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDL 112

Query: 65  EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRR 124
           EGNVCLNILREDWKPVLNINTVIYGL+HLFTEPN EDPLNHEAAAVLRDNPK FE NVRR
Sbjct: 113 EGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRR 172

Query: 125 AMAGGYVGQTFFARCM 139
           AM GG VGQT F RCM
Sbjct: 173 AMMGGQVGQTSFPRCM 185

[Close]

BLAST of MELO3C007489 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 95.1 bits (235), Expect = 4.6e-20
Identity = 43/95 (45.26%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GG F  S    P YP + PKV  KTKVYHPNI+  G++CL+IL+E W P L I+ V+ 
Sbjct: 45  YAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLL 104

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVR 122
            +  L T+PN +DPL  E A + + +   +ES  R
Sbjct: 105 SICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTAR 139

[Close]

BLAST of MELO3C007489 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 95.1 bits (235), Expect = 4.6e-20
Identity = 43/95 (45.26%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GG F  S    P YP + PKV  KTKVYHPNI+  G++CL+IL+E W P L I+ V+ 
Sbjct: 45  YAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLL 104

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVR 122
            +  L T+PN +DPL  E A + + +   +ES  R
Sbjct: 105 SICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTAR 139

The following BLAST results are available for this feature:

BLAST of MELO3C007489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440154.1	7.3e-60	99.11	PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis melo] >TYK12954.1 NEDD8-conju...	[more]
XP_011657802.1	6.2e-59	97.32	NEDD8-conjugating enzyme Ubc12 [Cucumis sativus] >KGN48442.1 hypothetical protei...	[more]
XP_022950886.1	1.1e-58	96.43	NEDD8-conjugating enzyme Ubc12-like [Cucurbita moschata] >XP_022950887.1 NEDD8-c...	[more]
XP_038883862.1	1.8e-58	96.43	NEDD8-conjugating enzyme Ubc12 [Benincasa hispida] >XP_038883863.1 NEDD8-conjuga...	[more]
XP_022978343.1	2.3e-58	95.54	NEDD8-conjugating enzyme Ubc12-like [Cucurbita maxima] >XP_022978344.1 NEDD8-con...	[more]

BLAST of MELO3C007489 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDY5	7.8e-57	88.39	NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1	[more]
Q9ZU75	9.0e-53	75.74	Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6DCZ9	3.4e-44	70.54	NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1	[more]
Q6P8D9	3.4e-44	70.54	NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1	[more]
A3KN22	1.7e-43	69.64	NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1	[more]

BLAST of MELO3C007489 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CPJ2	3.5e-60	99.11	NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B168	3.5e-60	99.11	NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo OX=3656 GN=LOC103484703 PE=3 SV=1	[more]
A0A0A0KJ88	3.0e-59	97.32	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487630 PE...	[more]
A0A6J1GG19	5.1e-59	96.43	NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita moschata OX=3662 GN=LOC11145384...	[more]
A0A6J1ISU1	1.1e-58	95.54	NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita maxima OX=3661 GN=LOC111478368 ...	[more]

BLAST of MELO3C007489 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36800.1	5.6e-58	88.39	RUB1 conjugating enzyme 1	[more]
AT4G36800.2	5.6e-58	88.39	RUB1 conjugating enzyme 1	[more]
AT2G18600.1	6.4e-54	75.74	Ubiquitin-conjugating enzyme family protein	[more]
AT3G08690.1	4.6e-20	45.26	ubiquitin-conjugating enzyme 11	[more]
AT3G08690.2	4.6e-20	45.26	ubiquitin-conjugating enzyme 11	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 1..129 e-value: 4.2E-18 score: 76.2
None	No IPR available	PANTHER	PTHR24068:SF379	SUBFAMILY NOT NAMED	coord: 26..128
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 26..128
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 5..138 e-value: 1.2E-37 score: 131.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 8..133
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 19..123 e-value: 1.9E-33 score: 115.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..129 score: 34.300156
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 27..122 e-value: 2.07564E-35 score: 117.303
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 56..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007489.1	MELO3C007489.1	mRNA