MELO3C007343.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C007343.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionFYVE-type domain-containing protein
Locationchr08: 2278335 .. 2278794 (-)
RNA-Seq ExpressionMELO3C007343.jh1
SyntenyMELO3C007343.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAATAGTTGTTATCCATAATTCATACAAGTGTTAATATCAAACGTTATAGAACAACCATTGGCTGCATTAATTACAATTACAATTATATGAAACCTAAACAATAAATTAACTCGAATCCATATAAATTAAAATAAATTACCTTAAATTAATTAGCTTTAATTATTTTAAATTTAGACTTTGGAGTCAATTTAAGAGGAAAGTCACTTGCCCCTTAGAACAAAAGGGGACACTGATGAAACTGCGAAAGTCTTGAGAAGAGCAAAGGTGGTGGAGATCCAAATGGATGAACTGGATACTCCAAAACCAAAGGGTGTGGTTGATGTCACTGAGGATGACAAGTCTGATGTTCTTAGAGCATTGGAAGGAGACGGGTTGCGAGACCGTGTGGAGGATGTGGAGATACGTAATGTACCACCATTCATCTCAATTCATTCTCATGCTACAATTGTATCATAA

mRNA sequence

AAATAATAGTTGTTATCCATAATTCATACAAGTGTTAATATCAAACGTTATAGAACAACCATTGGCTGCATTAATTACAATTACAATTATATGAAACCTAAACAATAAATTAACTCGAATCCATATAAATTAAAATAAATTACCTTAAATTAATTAGCTTTAATTATTTTAAATTTAGACTTTGGAGTCAATTTAAGAGGAAAGTCACTTGCCCCTTAGAACAAAAGGGGACACTGATGAAACTGCGAAAGTCTTGAGAAGAGCAAAGGTGGTGGAGATCCAAATGGATGAACTGGATACTCCAAAACCAAAGGGTGTGGTTGATGTCACTGAGGATGACAAGTCTGATGTTCTTAGAGCATTGGAAGGAGACGGGTTGCGAGACCGTGTGGAGGATGTGGAGATACGTAATGTACCACCATTCATCTCAATTCATTCTCATGCTACAATTGTATCATAA

Coding sequence (CDS)

ATGGATGAACTGGATACTCCAAAACCAAAGGGTGTGGTTGATGTCACTGAGGATGACAAGTCTGATGTTCTTAGAGCATTGGAAGGAGACGGGTTGCGAGACCGTGTGGAGGATGTGGAGATACGTAATGTACCACCATTCATCTCAATTCATTCTCATGCTACAATTGTATCATAA

Protein sequence

MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNVPPFISIHSHATIVS
Homology
BLAST of MELO3C007343.jh1 vs. NCBI nr
Match: XP_008439938.1 (PREDICTED: uncharacterized protein LOC103484575 [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 4.28e-13
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           MDELDTPKPKGVV +TEDDKS+VLRAL GD LRDRV+DVE+ NV
Sbjct: 830 MDELDTPKPKGVVGITEDDKSEVLRALGGDELRDRVKDVEVNNV 873

BLAST of MELO3C007343.jh1 vs. NCBI nr
Match: KAA0052743.1 (putative Phosphoinositide binding [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 4.28e-13
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           MDELDTPKPKGVV +TEDDKS+VLRAL GD LRDRV+DVE+ NV
Sbjct: 830 MDELDTPKPKGVVGITEDDKSEVLRALGGDELRDRVKDVEVNNV 873

BLAST of MELO3C007343.jh1 vs. NCBI nr
Match: XP_011658174.1 (uncharacterized protein LOC105435956 [Cucumis sativus] >KGN49160.1 hypothetical protein Csa_003546 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 1.09e-12
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           MDELDTPKPKGVVD+TED+KS+VLRALEGD LR+RV+ VE+ NV
Sbjct: 831 MDELDTPKPKGVVDITEDNKSEVLRALEGDELRNRVKGVEVHNV 874

BLAST of MELO3C007343.jh1 vs. NCBI nr
Match: TYK13080.1 (putative Phosphoinositide binding [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 1.33e-11
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           +DELDTPKPKGVV +TEDDKS+VLRAL GD LRD V+DVE+ NV
Sbjct: 857 IDELDTPKPKGVVGITEDDKSEVLRALGGDELRDYVKDVEVNNV 900

BLAST of MELO3C007343.jh1 vs. NCBI nr
Match: XP_008439939.1 (PREDICTED: uncharacterized protein LOC103484576 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 2.28e-09
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0

Query: 8  KPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRN 43
          KPK VVDVTEDDKS+VLRALE D LRDRVEDVEI N
Sbjct: 6  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHN 41

BLAST of MELO3C007343.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B0K6 (uncharacterized protein LOC103484575 OS=Cucumis melo OX=3656 GN=LOC103484575 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.07e-13
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           MDELDTPKPKGVV +TEDDKS+VLRAL GD LRDRV+DVE+ NV
Sbjct: 830 MDELDTPKPKGVVGITEDDKSEVLRALGGDELRDRVKDVEVNNV 873

BLAST of MELO3C007343.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U9Z7 (Putative Phosphoinositide binding OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003580 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.07e-13
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           MDELDTPKPKGVV +TEDDKS+VLRAL GD LRDRV+DVE+ NV
Sbjct: 830 MDELDTPKPKGVVGITEDDKSEVLRALGGDELRDRVKDVEVNNV 873

BLAST of MELO3C007343.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHG9 (FYVE-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516680 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.29e-13
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           MDELDTPKPKGVVD+TED+KS+VLRALEGD LR+RV+ VE+ NV
Sbjct: 831 MDELDTPKPKGVVDITEDNKSEVLRALEGDELRNRVKGVEVHNV 874

BLAST of MELO3C007343.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CNS9 (Putative Phosphoinositide binding OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006870 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.43e-12
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 1   MDELDTPKPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRNV 44
           +DELDTPKPKGVV +TEDDKS+VLRAL GD LRD V+DVE+ NV
Sbjct: 857 IDELDTPKPKGVVGITEDDKSEVLRALGGDELRDYVKDVEVNNV 900

BLAST of MELO3C007343.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B0P6 (uncharacterized protein LOC103484576 OS=Cucumis melo OX=3656 GN=LOC103484576 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.10e-09
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 0

Query: 8  KPKGVVDVTEDDKSDVLRALEGDGLRDRVEDVEIRN 43
          KPK VVDVTEDDKS+VLRALE D LRDRVEDVEI N
Sbjct: 6  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHN 41

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008439938.14.28e-1381.82PREDICTED: uncharacterized protein LOC103484575 [Cucumis melo][more]
KAA0052743.14.28e-1381.82putative Phosphoinositide binding [Cucumis melo var. makuwa][more]
XP_011658174.11.09e-1279.55uncharacterized protein LOC105435956 [Cucumis sativus] >KGN49160.1 hypothetical ... [more]
TYK13080.11.33e-1177.27putative Phosphoinositide binding [Cucumis melo var. makuwa][more]
XP_008439939.12.28e-0986.11PREDICTED: uncharacterized protein LOC103484576 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3B0K62.07e-1381.82uncharacterized protein LOC103484575 OS=Cucumis melo OX=3656 GN=LOC103484575 PE=... [more]
A0A5A7U9Z72.07e-1381.82Putative Phosphoinositide binding OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0KHG95.29e-1379.55FYVE-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516680 P... [more]
A0A5D3CNS96.43e-1277.27Putative Phosphoinositide binding OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3B0P61.10e-0986.11uncharacterized protein LOC103484576 OS=Cucumis melo OX=3656 GN=LOC103484576 PE=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007343.jh1.t1MELO3C007343.jh1.t1mRNA