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MELO3C007312 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGCGAGCCCACACGCAATCTTTTCCCTCTCTCTCCACATTTCTTCTTCTTCTCCTCCTCCGACACGACCTCCGTCTCTCACCATTCACAAATCGTCTCTCTTTCTCTCATCAGGGTTAATATCTCCCCCTTCTCCTTCTTATTTAGATTGTTCTTCTTGTTTGTTTCCTTTTTGATCTCACAATTCTTTTACTTTTCCCCCCTTTTGCTGCTACTAATTATCCCGTTTGGCTGCTGAGAATTCGTAGGAAAAACCATGAATAATAAGTTTTTGGTTGTTGTTTGTCTCTTGCTCTACGATAACATTTCTCTTCTCTTTTCTTAGATCCGATTCGATTGAATTTTCTTGCTATTCCAAAGGGTTTATTGTGTTTTTCAATTTGTTCTTCATCCAACTTTAACCCATGTTTTGTTTTTCCTTCTTCACGTCTCTAGACTGAACGGATTTTGGTTTATATATTGTGGGTTTGGAGTGTTGATCTGTGAAATTCAACCTTTTCTGGATTTATGTTTACTTTATATCTGTGTTTTCTTCAGTGAAGAAGGTCTTTCTCTTTGCGCGTGTCCCGTTCTCTTCTCCAATCCTCCACAGAACATAAAACCCCCAATTTCTCTTCACCATTCGCACCCCGAAGATTGATTCAATGGAGGTCAAGCTTTGGAACGACAAGCGCGAAAGAGAAATGTACGACAATTTTGCAGAGCTCTACGCCATTATCAAGGCTACCGAAAAGCTCGAAAAGGCTTACATCCGTGACATTATTTCCTCCTCCGATTACGAGACCGAATGCTTCAAACTCATTGCACATTTCAAGACCCTCGCCTCGACGCTCAAGGACACAGTCCCGAGTATTGAACGATTTGCTGATACTTACAAAATGGACTGTCCGGCGGCGATCAACCGTCTCGTGATAACTGGGGTGCCTGCCACGGTGGAGCACAGGGCGGCCGCCGCTGCCTCCGCCACCACCTCCGCTGCTATTGTGGCGGAGTGTGTGCAGAACTTCATTACGGCTATGGATTCATTGAAATTGAACATGGTAGCGGTTGATCAGGTGCACCCCTTGCTCTCGGATCTTGCTGCCTCATTGAACAAATTGACCATTCTGCCCCCGGATTTTGAAGGGAAAACGAAGATGAAAGAGTGGCTTGGACGACTTTCGAAAATGGGTGCCGCGGATGAGTTAACAGAGCAGCAGGCTCGGCAGCTTCACTTCGATCTTGAATCTTCTTATAATTCATTCATGGCGGCTTTGCCTACTGCTGGTACTTGAATGTTAATGGTAATCTGGTGTGTATATAGATATAAGAGCTTATTGTTTTTGTCGTACTGCATAAGTTCTCTTTCTTCATAAATCAAGATGGGTTGTGCTCTTTTTCCCCTTTAATTATGGATGCCTGTTAAAGAAGATGAAGCTTTTTTTTTTTCCTTTAAATTCTCATATTCAGTTTAAGAAGTCTCTTGAATTTCTATTGTTGATTTAGATTGTTTCTGAATCTTGTATGTATTTCTGAAAAATGTGCTTTGGAACTTGTTCAAAGTAGGATTATGTGTTAGGTTTGGCTTGGGATGCCTGAACCCTTATTCTATGGTCATTGGTAGGTCTGTTCTATTAGGCTCTTACTTTCAAACTAATGGGTTTGTATAGTTCTTTATTGAGAAACCTACTTGGCTACTCATTTCACCTAATTATTGTTTGGAAACTGGTACTGAATTGTGCATGTGATATCCTGATTGTTGTAAGAATTTCTTTTTTGCTTTTGAACCAGATGCTGCTATGTGCCAAGAGCTATATCCACATCTGATCAACAAATCCTTTTTTAGATACTTTTGGGGTTATGTGGGGTTGGATTTTGTGACTTTTGTGCTTTCAGTTCCAGAACTCATGGGTTACATTGTTACAGTTCTTTATCAGAAACCTGCCTCGTTTCCTCATAACTTTTTAAAGTCTCTGCTCATATTATATTGTCCTCCATACTGAATTTTCTTATTAATAAAGCATGTCAATCTAAGTCATGGCAAGTATCTAGTGACAATCTTTGCCTTGGAGACTACTTTTATTCCCTGAAGGCGGAATCCATGACCTTCAAGTAGGAGTTCAAGGAAGTTGTACTGATGACTAGTTCATTGGCAAGGCTCCCAAATTCTTTAGCTACACCCACTTATCTTTTGGGATTATGGTTAGGCAATCTCTTGATGATGATTCAGATGTTGAAGTTGTATTTATATTGTAACAGAATTAATTATAGTTTGAAGATATCATTTGAACTCTA GTGCGAGCCCACACGCAATCTTTTCCCTCTCTCTCCACATTTCTTCTTCTTCTCCTCCTCCGACACGACCTCCGTCTCTCACCATTCACAAATCGTCTCTCTTTCTCTCATCAGGTGAAGAAGGTCTTTCTCTTTGCGCGTGTCCCGTTCTCTTCTCCAATCCTCCACAGAACATAAAACCCCCAATTTCTCTTCACCATTCGCACCCCGAAGATTGATTCAATGGAGGTCAAGCTTTGGAACGACAAGCGCGAAAGAGAAATGTACGACAATTTTGCAGAGCTCTACGCCATTATCAAGGCTACCGAAAAGCTCGAAAAGGCTTACATCCGTGACATTATTTCCTCCTCCGATTACGAGACCGAATGCTTCAAACTCATTGCACATTTCAAGACCCTCGCCTCGACGCTCAAGGACACAGTCCCGAGTATTGAACGATTTGCTGATACTTACAAAATGGACTGTCCGGCGGCGATCAACCGTCTCGTGATAACTGGGGTGCCTGCCACGGTGGAGCACAGGGCGGCCGCCGCTGCCTCCGCCACCACCTCCGCTGCTATTGTGGCGGAGTGTGTGCAGAACTTCATTACGGCTATGGATTCATTGAAATTGAACATGGTAGCGGTTGATCAGGTGCACCCCTTGCTCTCGGATCTTGCTGCCTCATTGAACAAATTGACCATTCTGCCCCCGGATTTTGAAGGGAAAACGAAGATGAAAGAGTGGCTTGGACGACTTTCGAAAATGGGTGCCGCGGATGAGTTAACAGAGCAGCAGGCTCGGCAGCTTCACTTCGATCTTGAATCTTCTTATAATTCATTCATGGCGGCTTTGCCTACTGCTGATGCTGCTATGTGCCAAGAGCTATATCCACATCTGATCAACAAATCCTTTTTTAGATACTTTTGGGGTTATGTGGGGTTGGATTTTGTGACTTTTGTGCTTTCAGTTCCAGAACTCATGGGTTACATTGTTACAGTTCTTTATCAGAAACCTGCCTCGTTTCCTCATAACTTTTTAAAGTCTCTGCTCATATTATATTGTCCTCCATACTGAATTTTCTTATTAATAAAGCATGTCAATCTAAGTCATGGCAAGTATCTAGTGACAATCTTTGCCTTGGAGACTACTTTTATTCCCTGAAGGCGGAATCCATGACCTTCAAGTAGGAGTTCAAGGAAGTTGTACTGATGACTAGTTCATTGGCAAGGCTCCCAAATTCTTTAGCTACACCCACTTATCTTTTGGGATTATGGTTAGGCAATCTCTTGATGATGATTCAGATGTTGAAGTTGTATTTATATTGTAACAGAATTAATTATAGTTTGAAGATATCATTTGAACTCTA ATGGAGGTCAAGCTTTGGAACGACAAGCGCGAAAGAGAAATGTACGACAATTTTGCAGAGCTCTACGCCATTATCAAGGCTACCGAAAAGCTCGAAAAGGCTTACATCCGTGACATTATTTCCTCCTCCGATTACGAGACCGAATGCTTCAAACTCATTGCACATTTCAAGACCCTCGCCTCGACGCTCAAGGACACAGTCCCGAGTATTGAACGATTTGCTGATACTTACAAAATGGACTGTCCGGCGGCGATCAACCGTCTCGTGATAACTGGGGTGCCTGCCACGGTGGAGCACAGGGCGGCCGCCGCTGCCTCCGCCACCACCTCCGCTGCTATTGTGGCGGAGTGTGTGCAGAACTTCATTACGGCTATGGATTCATTGAAATTGAACATGGTAGCGGTTGATCAGGTGCACCCCTTGCTCTCGGATCTTGCTGCCTCATTGAACAAATTGACCATTCTGCCCCCGGATTTTGAAGGGAAAACGAAGATGAAAGAGTGGCTTGGACGACTTTCGAAAATGGGTGCCGCGGATGAGTTAACAGAGCAGCAGGCTCGGCAGCTTCACTTCGATCTTGAATCTTCTTATAATTCATTCATGGCGGCTTTGCCTACTGCTGATGCTGCTATGTGCCAAGAGCTATATCCACATCTGATCAACAAATCCTTTTTTAGATACTTTTGGGGTTATGTGGGGTTGGATTTTGTGACTTTTGTGCTTTCAGTTCCAGAACTCATGGGTTACATTGTTACAGTTCTTTATCAGAAACCTGCCTCGTTTCCTCATAACTTTTTAAAGTCTCTGCTCATATTATATTGTCCTCCATACTGA MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYETECFKLIAHFKTLASTLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLAASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPTADAAMCQELYPHLINKSFFRYFWGYVGLDFVTFVLSVPELMGYIVTVLYQKPASFPHNFLKSLLILYCPPY Homology
BLAST of MELO3C007312 vs. NCBI nr
Match: XP_008439898.1 (PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis melo] >XP_016899348.1 PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis melo] >KAA0052713.1 vacuolar protein sorting-associated protein 28-like protein 2 [Cucumis melo var. makuwa] >TYK13111.1 vacuolar protein sorting-associated protein 28-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 398.3 bits (1022), Expect = 5.5e-107 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of MELO3C007312 vs. NCBI nr
Match: XP_038883329.1 (vacuolar protein sorting-associated protein 28 homolog 2 [Benincasa hispida] >XP_038883330.1 vacuolar protein sorting-associated protein 28 homolog 2 [Benincasa hispida]) HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-106 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of MELO3C007312 vs. NCBI nr
Match: XP_004134727.1 (vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis sativus] >KGN49198.1 hypothetical protein Csa_003566 [Cucumis sativus]) HSP 1 Score: 395.2 bits (1014), Expect = 4.6e-106 Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of MELO3C007312 vs. NCBI nr
Match: KAG6603719.1 (Vacuolar protein sorting-associated protein 28-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 394.0 bits (1011), Expect = 1.0e-105 Identity = 205/216 (94.91%), Postives = 210/216 (97.22%), Query Frame = 0
BLAST of MELO3C007312 vs. NCBI nr
Match: XP_038886237.1 (vacuolar protein sorting-associated protein 28 homolog 2-like isoform X4 [Benincasa hispida]) HSP 1 Score: 392.9 bits (1008), Expect = 2.3e-105 Identity = 204/211 (96.68%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy Swiss-Prot
Match: Q9S9T7 (Vacuolar protein sorting-associated protein 28 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS28-2 PE=1 SV=2) HSP 1 Score: 350.1 bits (897), Expect = 2.2e-95 Identity = 177/207 (85.51%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy Swiss-Prot
Match: O65421 (Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS28-1 PE=1 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 4.2e-94 Identity = 176/207 (85.02%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy Swiss-Prot
Match: Q54NF1 (Vacuolar protein sorting-associated protein 28 OS=Dictyostelium discoideum OX=44689 GN=vps28 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 5.2e-52 Identity = 110/203 (54.19%), Postives = 144/203 (70.94%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy Swiss-Prot
Match: Q9V359 (Vacuolar protein sorting-associated protein 28 homolog OS=Drosophila melanogaster OX=7227 GN=Vps28 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.1e-37 Identity = 85/200 (42.50%), Postives = 126/200 (63.00%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy Swiss-Prot
Match: Q9UK41 (Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens OX=9606 GN=VPS28 PE=1 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35 Identity = 80/200 (40.00%), Postives = 126/200 (63.00%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy TrEMBL
Match: A0A1S3B0K8 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis melo OX=3656 GN=LOC103484547 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.7e-107 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy TrEMBL
Match: A0A5D3CMS3 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007210 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.7e-107 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy TrEMBL
Match: A0A0A0KI07 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis sativus OX=3659 GN=Csa_6G517060 PE=3 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 2.2e-106 Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy TrEMBL
Match: A0A6J1IJT1 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucurbita maxima OX=3661 GN=LOC111478075 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.5e-105 Identity = 202/207 (97.58%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of MELO3C007312 vs. ExPASy TrEMBL
Match: A0A6J1GE20 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucurbita moschata OX=3662 GN=LOC111453341 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 9.4e-105 Identity = 201/207 (97.10%), Postives = 205/207 (99.03%), Query Frame = 0
BLAST of MELO3C007312 vs. TAIR 10
Match: AT4G05000.1 (Vacuolar protein sorting-associated protein VPS28 family protein ) HSP 1 Score: 350.1 bits (897), Expect = 1.6e-96 Identity = 177/207 (85.51%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of MELO3C007312 vs. TAIR 10
Match: AT4G05000.2 (Vacuolar protein sorting-associated protein VPS28 family protein ) HSP 1 Score: 350.1 bits (897), Expect = 1.6e-96 Identity = 177/207 (85.51%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of MELO3C007312 vs. TAIR 10
Match: AT4G21560.1 (vacuolar protein sorting-associated protein 28 homolog 1 ) HSP 1 Score: 345.9 bits (886), Expect = 3.0e-95 Identity = 176/207 (85.02%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of MELO3C007312 vs. TAIR 10
Match: AT4G21560.2 (vacuolar protein sorting-associated protein 28 homolog 1 ) HSP 1 Score: 345.9 bits (886), Expect = 3.0e-95 Identity = 176/207 (85.02%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of MELO3C007312 vs. TAIR 10
Match: AT4G21560.3 (vacuolar protein sorting-associated protein 28 homolog 1 ) HSP 1 Score: 345.9 bits (886), Expect = 3.0e-95 Identity = 176/207 (85.02%), Postives = 196/207 (94.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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