MELO3C007125 (gene) Melon (DHL92) v4

Overview
NameMELO3C007125
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionprotein TIFY 5A
Locationchr08: 958114 .. 960171 (-)
RNA-Seq ExpressionMELO3C007125
SyntenyMELO3C007125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCACCCTTCTCTCCTTAAATACTCCTCTTCCCTTTTTCTATCGTTTCTCACAAAATTCCTTTCTTTTTCTTTTTTTTGAAAATTCCCCGCTTTCCTGTTTCTTTTCTCCATAACCACAACGCACAAACAAACTTACTTCTCCAAACCATTCCCATGAAAGTTAATTCCACCTCTCTCAGAATGAGGCGAAACTACAACTTGGAACTTCGTCTTTCTCCCACCTACTCCTCCGCCGCCGCCGCCACCGCCTCCGTCTCCGGCAACCCCTCCCCACCGCTTACGGCAGCCCTCAAAGCCAACAACTTACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGTTACGGAGCTTCAGGTAACCAAAGAACCAAAATTTCATTTCTTTTTCTTTCAACGTGGCTTCAAGTGATTGGATTAGGTGGCTGTGAGCTATGACAGTCGTCTTTGACCGAGTTCTAAATCAAATAAAATCGTCGAGCATGAAATATTCATGCGACAATCCCCGTGGTTAGGTCTCCTTTTTTTAAGCCGACACCGCGTTTTGGCTTTGATGACATGTCGTTTTCGTTCCTCTCTACCCAATTCTTCTACTTTAGAAAAAAGAAAAAAAAAACACGTTTTTTTTTATGTCTTCTTTTTATTTTTAATGATAATTCTTTAGTTAATCTTGAGGTTATCCTTTAGTTAATATAATAGTAATTATCTAATTACAAATATTATTTTTATTTTTTGATGTTTCAGAAGAATGTGAATTATTTTAGGAATAATTGCAAATGTAGTAATTATATTTAAAATAATTAAGTATATAACGATATTTTTAAAAAAATTACAAATATAACAAAATTTATTAAAATCTATCAATGATAGAAGTTTATGATCATGTAACAAATGTTGATCTATCACTGATAAACCATAAGAGTCTATCAACGATAGAAATCTATCATTGATAGATTTTGCTATATTTGTAATTTTTTTAAAATATTGCTATATACTTAATAATTATTCTAAAAATTATTATCCATTATAATTATCGATTATTTTAAGTCTATAATTTCATAACAAGCATCAACTTCAATTATTTTGTTTCATTTGGCTATCTTTTATTATTTATAAACTTTTTTTGGGTAATAATTATTGAGAAAGGAACTACTCCTGTCTTTCCGACATTAAAAAGAAAAAAAAAAAGATATATATATGGTTAAAGTGATTTTGATTTTGTTATTTGGATAAATGAAAATTTGAGGGTTTATTTGATTCTTGTTTTTGTTTTTATTTTTTCAAAGCTAATTAGGTTAGATATTTAATGTTTAAAAAACTTTATTTTTCATGTATTTTTGTTTCCATTTTTAGGTTATGATTTTAAAGAAGAAGAAATATTAAACGGTGCTTTATCAAACGTAATTATACATACATATATATATATACATACATACATACATATATATATACATACATACATATATATATACATACATACATACATACATACATACATACATACATATATATATATATATATATATATTGAATAGAAGCAATAAGAATTAATTAAGTAACAATTATCAAACATATTTCTAACCTAAACTAAAAAGGAAAATTGAGAAACCCCACGGAAAGGAGTCTAAAATATTATGTTAAATTTACATGTGAGTGATAGTATTTTCATTGATGAATGTTACAGGCAAGAGCAATTCTAAAGTTGGCAACCAGAGAAATGGAGGAAAATGGTTTGAGCGAAACACCATCACCGATGCTACAACAGTCTCCACCGCCACGAACTCCGACAACGCCGGGGCTTTCGATGAAGAAATCACTGCAAAGATTTCTGCAGAAGAGAAAGCATAGGGTTCAAGCAACTTCTCCATATAACCATTGAAAATATATTAAAACTAATTAAGGCCATTGGGGGCTTAAATCATGTGTTCTTAATCGTTTTGGTCCTTTTTTTTTTGTTTTGTTTTCATATTATATATAAATGATGTAAGAGGATATAAGAACATCTCTAGAGGCTTTGTAAATTACTATATATATCTCATTAGTTTTTGTTAATCTAAC

mRNA sequence

TAGCACCCTTCTCTCCTTAAATACTCCTCTTCCCTTTTTCTATCGTTTCTCACAAAATTCCTTTCTTTTTCTTTTTTTTGAAAATTCCCCGCTTTCCTGTTTCTTTTCTCCATAACCACAACGCACAAACAAACTTACTTCTCCAAACCATTCCCATGAAAGTTAATTCCACCTCTCTCAGAATGAGGCGAAACTACAACTTGGAACTTCGTCTTTCTCCCACCTACTCCTCCGCCGCCGCCGCCACCGCCTCCGTCTCCGGCAACCCCTCCCCACCGCTTACGGCAGCCCTCAAAGCCAACAACTTACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGTTACGGAGCTTCAGGCAAGAGCAATTCTAAAGTTGGCAACCAGAGAAATGGAGGAAAATGGTTTGAGCGAAACACCATCACCGATGCTACAACAGTCTCCACCGCCACGAACTCCGACAACGCCGGGGCTTTCGATGAAGAAATCACTGCAAAGATTTCTGCAGAAGAGAAAGCATAGGGTTCAAGCAACTTCTCCATATAACCATTGAAAATATATTAAAACTAATTAAGGCCATTGGGGGCTTAAATCATGTGTTCTTAATCGTTTTGGTCCTTTTTTTTTTGTTTTGTTTTCATATTATATATAAATGATGTAAGAGGATATAAGAACATCTCTAGAGGCTTTGTAAATTACTATATATATCTCATTAGTTTTTGTTAATCTAAC

Coding sequence (CDS)

ATGAAAGTTAATTCCACCTCTCTCAGAATGAGGCGAAACTACAACTTGGAACTTCGTCTTTCTCCCACCTACTCCTCCGCCGCCGCCGCCACCGCCTCCGTCTCCGGCAACCCCTCCCCACCGCTTACGGCAGCCCTCAAAGCCAACAACTTACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGTTACGGAGCTTCAGGCAAGAGCAATTCTAA

Protein sequence

MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSPPLTAALKANNLPSSTTAGSASVTLRSFRQEQF
Homology
[Close]
BLAST of MELO3C007125 vs. NCBI nr
Match: XP_008439622.1 (PREDICTED: protein TIFY 5A [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-10
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0 

Query: 1  MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSP 41
          MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSP
Sbjct: 1  MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSP 40

[Close]
BLAST of MELO3C007125 vs. ExPASy TrEMBL
Match: A0A1S3AZ71 (protein TIFY 5A OS=Cucumis melo OX=3656 GN=LOC103484359 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0 

Query: 1  MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSP 41
          MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSP
Sbjct: 1  MKVNSTSLRMRRNYNLELRLSPTYSSAAAATASVSGNPSP 40

The following BLAST results are available for this feature:
BLAST of MELO3C007125 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439622.12.8e-10100.00PREDICTED: protein TIFY 5A [Cucumis melo][more]
BLAST of MELO3C007125 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C007125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AZ711.3e-10100.00protein TIFY 5A OS=Cucumis melo OX=3656 GN=LOC103484359 PE=3 SV=1[more]
BLAST of MELO3C007125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007125.1MELO3C007125.1mRNA