MELO3C007017 (gene) Melon (DHL92) v4

Overview


Name	MELO3C007017
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	MADS-box protein FBP24
Location	chr08: 211301 .. 212406 (+)
RNA-Seq Expression	MELO3C007017
Synteny	MELO3C007017

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAACCTTTACCCTACCAAGGACATAAATATATATAGTTTTTAGGCGCGGGGGGTATAGGAGAGAATCAAGAAATCATAATGGGAAGAGGAAAAATCGCAATCAGGAGAATAGAGAATCGGACGACAAGGCAAGTTACATTCTCGAAGCGGAGAGGCGGTCTGTTCAAGAAGACCCATGAACTTTCTGTTTTATGTGATGCTCAGATCGCTCTCATCGTCTTCTCCAGCAACGGCAAATTGTTCGAATACTGTACTCAAACAACATGGTATTAATTATTATTTCTTCTTCGTTTTTTTTAAAAAAAATTATATATAATATTTACTTCTTCTACACACTTCCTGCCTGTGGATATCCTCAGCATGGATCAAATCATCAGGAGATATCAGATTGCAATAGGGAGTCGAATTCCAGAGCATAATATGAACGATCCGGTAGCACACTTAATTCATTAAATAATCTCATTTCATCTCATCTCTCATCTCCTCATATTTATCAGTATTATATTAAACTAAATAATTTATTGAAATAAATTAGGAGGAATTGGAGCGGCAAGTAAGGTCAATGAAAAAAGAAACGGACGATCTTCAGCTGAGTTTGCAGCGCTACACAGCCGAGGATTTTAGCACTTTTCACCTTCGCGATCTCGACGATATCGAGAACCGTCTCCAAAACTCTCTCAACAGAGTTCGTGCTCGAAAGGCATTATTATTAATATTATTTTCCATTTTACTACCTTTTTCTCTCTAAATATATATACATATATATATATATATATATATATATACATACATATACATAGATATTTATTAGGGTTTACTTAATTAATTAATTAATTATAGGGTTTTGTATTGGTTTTTTTGGTGCAGTCAGAGCTGTTACAGCAGCAAGTCGACAATCTGCGAAGAAAGGTTTTACTTATTTATTTTCGTTCCTTCATTCTTGTAAATTAACATATAATACATATAAGTAATTATATGATTTAATTTAATTCATTAATAACCTGGTTTTTTCATTTTTCCCTTTAATTTTGCATGATGATACTAATTAGGAGAAAATTCTGGAGGATGAAAATGAACAGATTTACCATCTGGTAATCAATTAA

mRNA sequence

CTTTAACCTTTACCCTACCAAGGACATAAATATATATAGTTTTTAGGCGCGGGGGGTATAGGAGAGAATCAAGAAATCATAATGGGAAGAGGAAAAATCGCAATCAGGAGAATAGAGAATCGGACGACAAGGCAAGTTACATTCTCGAAGCGGAGAGGCGGTCTGTTCAAGAAGACCCATGAACTTTCTGTTTTATGTGATGCTCAGATCGCTCTCATCGTCTTCTCCAGCAACGGCAAATTGTTCGAATACTGTACTCAAACAACATGCATGGATCAAATCATCAGGAGATATCAGATTGCAATAGGGAGTCGAATTCCAGAGCATAATATGAACGATCCGGAGGAATTGGAGCGGCAAGTAAGGTCAATGAAAAAAGAAACGGACGATCTTCAGCTGAGTTTGCAGCGCTACACAGCCGAGGATTTTAGCACTTTTCACCTTCGCGATCTCGACGATATCGAGAACCGTCTCCAAAACTCTCTCAACAGATCAGAGCTGTTACAGCAGCAAGTCGACAATCTGCGAAGAAAGGAGAAAATTCTGGAGGATGAAAATGAACAGATTTACCATCTGGTAATCAATTAA

Coding sequence (CDS)

ATGGGAAGAGGAAAAATCGCAATCAGGAGAATAGAGAATCGGACGACAAGGCAAGTTACATTCTCGAAGCGGAGAGGCGGTCTGTTCAAGAAGACCCATGAACTTTCTGTTTTATGTGATGCTCAGATCGCTCTCATCGTCTTCTCCAGCAACGGCAAATTGTTCGAATACTGTACTCAAACAACATGCATGGATCAAATCATCAGGAGATATCAGATTGCAATAGGGAGTCGAATTCCAGAGCATAATATGAACGATCCGGAGGAATTGGAGCGGCAAGTAAGGTCAATGAAAAAAGAAACGGACGATCTTCAGCTGAGTTTGCAGCGCTACACAGCCGAGGATTTTAGCACTTTTCACCTTCGCGATCTCGACGATATCGAGAACCGTCTCCAAAACTCTCTCAACAGATCAGAGCTGTTACAGCAGCAAGTCGACAATCTGCGAAGAAAGGAGAAAATTCTGGAGGATGAAAATGAACAGATTTACCATCTGGTAATCAATTAA

Protein sequence

MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQTTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFHLRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLVIN

Homology

[Close]

BLAST of MELO3C007017 vs. NCBI nr
Match: XP_008439464.1 (PREDICTED: MADS-box protein FBP24 [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 2.3e-84
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHL+
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLI 166

[Close]

BLAST of MELO3C007017 vs. NCBI nr
Match: XP_011658351.1 (MADS-box protein FBP24 isoform X4 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 5.2e-84
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHL+
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLI 166

[Close]

BLAST of MELO3C007017 vs. NCBI nr
Match: XP_031743700.1 (MADS-box protein FBP24 isoform X5 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 8.8e-84
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHL+
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLM 166

[Close]

BLAST of MELO3C007017 vs. NCBI nr
Match: XP_004134531.2 (MADS-box protein FBP24 isoform X1 [Cucumis sativus] >XP_031743699.1 MADS-box protein FBP24 isoform X2 [Cucumis sativus] >KAE8647781.1 hypothetical protein Csa_002733 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 3.7e-82
Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLDDIENRLQNSLNR     SELLQQQVDNLRRKEKILEDENEQIYHL+
Sbjct: 121 LRDLDDIENRLQNSLNRVRARKSELLQQQVDNLRRKEKILEDENEQIYHLI 171

[Close]

BLAST of MELO3C007017 vs. NCBI nr
Match: XP_011658350.1 (MADS-box protein FBP24 isoform X3 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.3e-82
Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLDDIENRLQNSLNR     SELLQQQVDNLRRKEKILEDENEQIYHL+
Sbjct: 121 LRDLDDIENRLQNSLNRVRARKSELLQQQVDNLRRKEKILEDENEQIYHLM 171

[Close]

BLAST of MELO3C007017 vs. ExPASy Swiss-Prot
Match: Q9ATE5 (MADS-box protein FBP24 OS=Petunia hybrida OX=4102 GN=FBP24 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-41
Identity = 91/173 (52.60%), Postives = 126/173 (72.83%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI ++RIEN+T+RQVTFSKRR GL KKTHELSVLCDAQI LI+FSS GKLFEYC+Q
Sbjct: 4   MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M QII RY    G+ +P    ++  +L  +V  M+++T +LQLSLQRY  +D S   
Sbjct: 64  PHSMSQIISRYLQTTGASLPVE--DNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQ 123

Query: 121 LRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLVIN 169
             +L+++E +L+++LN     + EL+QQQ++NL++ EK+LE EN  +Y  ++N
Sbjct: 124 YEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMN 174

[Close]

BLAST of MELO3C007017 vs. ExPASy Swiss-Prot
Match: Q8RVL4 (MADS-box protein defh21 OS=Antirrhinum majus OX=4151 GN=DEFH21 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.9e-39
Identity = 94/179 (52.51%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI ++RIEN T+RQVTFSKRR GL KKTHELSVLCDAQI LIVFS+ GKL EYCT 
Sbjct: 1   MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTP 60

Query: 61  TTCMDQIIRRYQIAIG------SRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAE 120
              M QII RY  A G      +R   H  ND  ++ +++  MK+ET +LQL+LQRY  +
Sbjct: 61  PFSMKQIIDRYVKAKGILPEMENRAGPHADND--QVIKELTRMKEETLNLQLNLQRYKGD 120

Query: 121 DFSTFHLRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLVIN 169
           D ST    +L ++E  L  SLN     + ELL +Q++NL+R E +LE EN+++YH +++
Sbjct: 121 DLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMS 177

[Close]

BLAST of MELO3C007017 vs. ExPASy Swiss-Prot
Match: Q8VWM8 (MADS-box protein ZMM17 OS=Zea mays OX=4577 GN=M17 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.9e-38
Identity = 81/171 (47.37%), Postives = 121/171 (70.76%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I+RIEN T RQVTFSKRRGGL KK +EL+VLCDA++ +++FSS GK+FEYC+ 
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              + ++I +YQ A  S   E  +N  +++  ++  MK E + L+  ++RYT +D S+  
Sbjct: 61  ACSLRELIEQYQHATNSHFEE--INHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLT 120

Query: 121 LRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLV 167
           L D+ D+E +L+ S++     + +LL QQ+DNLRRKE+ILED+N  +Y ++
Sbjct: 121 LDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMI 169

[Close]

BLAST of MELO3C007017 vs. ExPASy Swiss-Prot
Match: Q9XGJ4 (MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 84/171 (49.12%), Postives = 121/171 (70.76%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I+RIEN T RQVTFSKRRGGL KK HELSVLCDA++ LI+FSS+GKLFEY + 
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           ++ M +II RYQ   G+RI E+   D + L  ++  MK E + LQ +++R   ED ++  
Sbjct: 61  SSSMKKIIERYQKVSGARITEY---DNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLT 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           + +L  +  +L+++ +R     ++L+ QQ++NLRRKE+ILED+N  +  L+
Sbjct: 121 MTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLL 168

[Close]

BLAST of MELO3C007017 vs. ExPASy Swiss-Prot
Match: Q8RYD9 (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana OX=3702 GN=TT16 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-35
Identity = 79/168 (47.02%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I++IEN+T RQVTFSKRR GL KKT ELS+LCDA I LIVFS+ GKL E+C++
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M Q+I RY    G R+P+H+ +D E+L  ++  +++ET +L+L L+ +   D ++  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHH-DDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIP 120

Query: 121 LRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQIY 164
             +LD +E +L++S+      ++EL+QQQ++NL RK ++LE++N  +Y
Sbjct: 121 PNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMY 167

[Close]

BLAST of MELO3C007017 vs. ExPASy TrEMBL
Match: A0A1S3AYU5 (MADS-box protein FBP24 OS=Cucumis melo OX=3656 GN=LOC103484259 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHL+
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLI 166

[Close]

BLAST of MELO3C007017 vs. ExPASy TrEMBL
Match: A0A6J1IVW0 (MADS-box protein FBP24 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478871 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 145/171 (84.80%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRR G+FKKTHELSVLCDAQI LIVFSSNGKLF+YCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGVFKKTHELSVLCDAQIGLIVFSSNGKLFQYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
             CMDQIIRRYQIA+G+ IPE NMN PEELER++R M+K+TDDLQLSLQRYTAEDFSTF 
Sbjct: 61  PACMDQIIRRYQIAVGNPIPEQNMNHPEELERRLRIMRKDTDDLQLSLQRYTAEDFSTFQ 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDL DIENRLQNSL+R     SELLQQQVDNLRRKEK+LEDENEQIYHL+
Sbjct: 121 LRDLHDIENRLQNSLDRVRARKSELLQQQVDNLRRKEKMLEDENEQIYHLI 171

[Close]

BLAST of MELO3C007017 vs. ExPASy TrEMBL
Match: A0A6J1ECK8 (MADS-box protein FBP24 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432969 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 145/171 (84.80%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRR G+FKKTHELSVLCDAQI LIVFSSNGKLF+YCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGVFKKTHELSVLCDAQIGLIVFSSNGKLFQYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
             CMDQIIRRYQIA+G+ IPE NMN PEELER++R M+K+TDDLQLSLQRYTAEDFSTF 
Sbjct: 61  PACMDQIIRRYQIAVGNPIPEQNMNHPEELERRLRIMRKDTDDLQLSLQRYTAEDFSTFQ 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDL DIENRLQNSL+R     SELLQQQVDNLRRKEK+LEDENEQIYHL+
Sbjct: 121 LRDLHDIENRLQNSLDRVRARKSELLQQQVDNLRRKEKMLEDENEQIYHLI 171

[Close]

BLAST of MELO3C007017 vs. ExPASy TrEMBL
Match: A0A6J1KTV0 (MADS-box protein FBP24-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497166 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 145/171 (84.80%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRR GLFKKTHELSVLCDAQIALIVFSSNGKLFEYC+Q
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCSQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
            TCMDQIIRRYQIAIG+ IP+ NMNDPEELER +R M+K+TD+LQLSLQRYTAED STF 
Sbjct: 61  ATCMDQIIRRYQIAIGNPIPDQNMNDPEELERLLRIMRKDTDELQLSLQRYTAEDLSTFQ 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLD+IENRLQ SLNR     SE+LQQQV+NLRRKEK+LEDENEQIYHL+
Sbjct: 121 LRDLDEIENRLQTSLNRVRARKSEVLQQQVENLRRKEKMLEDENEQIYHLI 171

[Close]

BLAST of MELO3C007017 vs. ExPASy TrEMBL
Match: A0A6J1ELC6 (MADS-box protein FBP24-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433644 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.1e-71
Identity = 144/171 (84.21%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRR GLFKKTHELSVLCDAQIALIVFSSNGKLFEYC+Q
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCSQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
            TCMDQIIRRYQIAIG+ IP+ NMNDPEELER +R M+K+TD+LQLSLQRYTAED STF 
Sbjct: 61  ATCMDQIIRRYQIAIGNPIPDQNMNDPEELERLLRIMRKDTDELQLSLQRYTAEDLSTFQ 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           LRDLD+IENRLQ SLNR     SE+L QQV+NLRRKEK+LEDENEQIYHL+
Sbjct: 121 LRDLDEIENRLQTSLNRVRARKSEVLHQQVENLRRKEKMLEDENEQIYHLI 171

[Close]

BLAST of MELO3C007017 vs. TAIR 10
Match: AT5G23260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 79/168 (47.02%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I++IEN+T RQVTFSKRR GL KKT ELS+LCDA I LIVFS+ GKL E+C++
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M Q+I RY    G R+P+H+ +D E+L  ++  +++ET +L+L L+ +   D ++  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHH-DDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIP 120

Query: 121 LRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQIY 164
             +LD +E +L++S+      ++EL+QQQ++NL RK ++LE++N  +Y
Sbjct: 121 PNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMY 167

[Close]

BLAST of MELO3C007017 vs. TAIR 10
Match: AT5G23260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 76/163 (46.63%), Postives = 116/163 (71.17%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I++IEN+T RQVTFSKRR GL KKT ELS+LCDA I LIVFS+ GKL E+C++
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M Q+I RY    G R+P+H+ +D E+L  ++  +++ET +L+L L+ +   D ++  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHH-DDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIP 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIY 164
             +LD +E +L++S+ +    +QQ++NL RK ++LE++N  +Y
Sbjct: 121 PNELDGLERQLEHSVLKVRERKQQLENLSRKRRMLEEDNNNMY 162

[Close]

BLAST of MELO3C007017 vs. TAIR 10
Match: AT5G23260.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-31
Identity = 72/163 (44.17%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I++IEN+T RQVTFSKRR GL KKT ELS+LCDA I LIVFS+ GKL E+C++
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M Q+I RY    G R+P+H+ +D E+L  ++  +++ET +L+L L+ +   D ++  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHH-DDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIP 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIY 164
             +LD +E +L++S+ +            RK ++LE++N  +Y
Sbjct: 121 PNELDGLERQLEHSVLKVR---------ERKRRMLEEDNNNMY 153

[Close]

BLAST of MELO3C007017 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 66/171 (38.60%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRG++ ++RIEN+  RQVTFSKRR GL KK HE+SVLCDA++AL+VFS  GKLFEY T 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  TTCMDQIIRRYQ-IAIGSR---IPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDF 120
            +CM++I+ RY+  +   R    PE ++N    +E     +K + + L+ + + Y  ED 
Sbjct: 61  -SCMEKILERYERYSYAERQLIAPESDVNTNWSME--YNRLKAKIELLERNQRHYLGEDL 120

Query: 121 STFHLRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQI 163
                ++L ++E +L  +L      +++L+ + ++ L++KEK ++++N  +
Sbjct: 121 QAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSML 168

[Close]

BLAST of MELO3C007017 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 64/171 (37.43%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRG++ ++RIEN+  RQVTFSKRR GL KK  E+SVLCDA+++LIVFS  GKLFEY ++
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  TTCMDQIIRRYQ-IAIGSR---IPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDF 120
            +CM++++ RY+  +   R    P+ ++N       +   +K + + L+ + + Y  E+ 
Sbjct: 61  -SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEEL 120

Query: 121 STFHLRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQI 163
               L+DL ++E +L+ +L      +++L+ + +++L+RKEK +++EN  +
Sbjct: 121 EPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSML 170

The following BLAST results are available for this feature:

BLAST of MELO3C007017 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439464.1	2.3e-84	99.40	PREDICTED: MADS-box protein FBP24 [Cucumis melo]	[more]
XP_011658351.1	5.2e-84	98.80	MADS-box protein FBP24 isoform X4 [Cucumis sativus]	[more]
XP_031743700.1	8.8e-84	98.80	MADS-box protein FBP24 isoform X5 [Cucumis sativus]	[more]
XP_004134531.2	3.7e-82	95.91	MADS-box protein FBP24 isoform X1 [Cucumis sativus] >XP_031743699.1 MADS-box pro...	[more]
XP_011658350.1	6.3e-82	95.91	MADS-box protein FBP24 isoform X3 [Cucumis sativus]	[more]

BLAST of MELO3C007017 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATE5	2.5e-41	52.60	MADS-box protein FBP24 OS=Petunia hybrida OX=4102 GN=FBP24 PE=1 SV=1	[more]
Q8RVL4	6.9e-39	52.51	MADS-box protein defh21 OS=Antirrhinum majus OX=4151 GN=DEFH21 PE=2 SV=1	[more]
Q8VWM8	9.9e-38	47.37	MADS-box protein ZMM17 OS=Zea mays OX=4577 GN=M17 PE=2 SV=1	[more]
Q9XGJ4	1.1e-36	49.12	MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1	[more]
Q8RYD9	1.6e-35	47.02	Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana OX=3702 GN=TT16 PE=1 SV=1	[more]

BLAST of MELO3C007017 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYU5	1.1e-84	99.40	MADS-box protein FBP24 OS=Cucumis melo OX=3656 GN=LOC103484259 PE=4 SV=1	[more]
A0A6J1IVW0	8.4e-72	84.80	MADS-box protein FBP24 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478871 PE...	[more]
A0A6J1ECK8	8.4e-72	84.80	MADS-box protein FBP24 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432969 ...	[more]
A0A6J1KTV0	1.1e-71	84.80	MADS-box protein FBP24-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114971...	[more]
A0A6J1ELC6	4.1e-71	84.21	MADS-box protein FBP24-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of MELO3C007017 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23260.2	1.1e-36	47.02	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.1	1.6e-35	46.63	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.3	1.9e-31	44.17	K-box region and MADS-box transcription factor family protein	[more]
AT1G69120.1	1.6e-27	38.60	K-box region and MADS-box transcription factor family protein	[more]
AT1G26310.1	2.1e-27	37.43	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..161
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..163
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 71.89 coord: 3..23 score: 65.43 coord: 38..59 score: 58.75
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.5E-39 score: 147.4
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 2.3E-25 score: 87.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 31.07613
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..89 e-value: 4.3E-26 score: 92.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..88
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 85..163 e-value: 9.9E-11 score: 41.7
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..168 score: 8.93899
IPR031050	MADS-box protein FBP24/AGL63/defh21-like	PANTHER	PTHR11945:SF537	MADS-BOX TRANSCRIPTION FACTOR	coord: 1..163
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..72 e-value: 2.23982E-41 score: 131.52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007017.1	MELO3C007017.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048316	seed development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding