MELO3C006677 (gene) Melon (DHL92) v4

Overview


Name	MELO3C006677
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Dynein light chain
Location	chr06: 4920904 .. 4923444 (+)
RNA-Seq Expression	MELO3C006677
Synteny	MELO3C006677

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATAACAAAAATGACGTGGAAAATCATGAGAATAATTTTTTAAAAGAAAAAAAAAAAGGAAAAAGAGAAAAGGAATAGGAGGGAGAAGAGCGGGTAGAGAGGACGACTGGGCGACGGGAATCTTACAGAAGAGACGGCAGAGTGATAGTGGTTGAGAGCGATACCCTCTTCTTCTCTCTCACTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTACCCACCTAAACCAAACAAAAATATTCTCTCCCAAAACTCCATCACAATCATGAACCTAGAATCTCGACGCACCACCAATCATCCTCCACCTTCAATTGTGAAGACTGAATCTACAGATGATCGCAAACCCTCATCTCCCTCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACCGACATGCAGAAGGAAGCTATTGACGCTGCCATAGCCGTCAGTGCTTTAACCACGCTCTTGTTCTCTTAATTTTCTCTATTCATTCCTTCATTATCTCTTTCGTTTTTAGGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTACCTTTTTTCACTCTCTATCTCTATTTCTTTACCTTCCTCCTTGATTTTCGGTTTCTTTCACTCTGATGTACAGAATCTCTGTTCATATCTCTAACTTTTACGCTCTCTTGGAAATGCTTCTCTTAATTCAGCTTCAATCTACGGAAATTGAGATCTAGCTGTTTGTTTATTTTATTTTATTTTTTGTCTTTTTCCCGGTGAACAATTAGATGGAGATTGGAGTAGGATGTTTTTCTTCGGAATTCTGATACCGTTAGCTTGGTTCTTCTTTCAGGCTCTACCACTTAGCAGAAGCAAGATTTGTCTGCATAGGCAGTTTTAGCCCATTAGTGTGTTTGTAAATTGAAATTACATATTTTCTTCTACTTGCATCACTAGGTAAGTGAAATCTAGTTGAGAATTTTGACTCCATTTGGTCCATCGCCTTAGTCTATATTGAATCTGTTAGCTAATTCTCAGCAATTTGGGGTGGGGGGTTCCGAATCTGGTTTTGATGACAAGATCAACGAGCATAGTGTGCTAGGATTCATTGTTCATGTTATGGAATCCGCAAATAAAGAAAATAGACAACATCAAGCAATAGAGAGTCGGGCATAGATTTACATGGTTTGGCAGAGGGAGAAAACAACTTGATTACAGAGAAAATTTAGAATGTAGATCACATGCGATTCTAAGGTTAAAAGTGTTAATAAAGCTTAGGGTCAAAATTGTAAATAAAGTAAATACAGCAAATGCAAATTCAAGTTAGTTTCACCCCGACTTGGTCGTGTCAATTCAAGGCATTCCACCAGTTTTGGAACTATGCAAGTTGAATGGGACAGAGGGAAATTGGTTATCAGTATTCAATTCTTCCCATCGTCAGTTGTCTCTTTTTTCTAAGTAAAATATCAGGCTGTAGCACGTAAGCAGAATTTGACTTAGTTTTGCTAGTTAGAGGTTGACTTCGCTGTGATATTGTCTCTTGAGAAATTTTTGCTGAACATGATCCAATCTCATATCTCTATGGTTTTGTTTGTAATTGCATGATGAAAGGTAAGAATCAAAATAGACTGTTTCATGTTTAATTTGAGTATCTAGTGCTCAGTTCTTGATATTTATGGGATGTAAAAGATTGCTTGACGAGATACAGGGAGGTGATCTACAACTTCTCTTTTTCTTCTGCTGTTAGGAAAAAAACATTTCTTATAGGCAAATAATAAAAGGTTGTGATCGGTGATCACACTACACTGACAGAGAGTCTTTCTAATATAAACTTTTAATAGGCAACTCTTTTTACCAGGCCATTCTAAGATTCAGAGATGAACACTAAATGGTTTGCCCTCAAGTTGGTATGTAACTTGTAAGTGGGTAGTCCTGTTGCTCGTGGTTTCCTTCACTCCGTAGAGCCACAATTTTTCCTTCATATGGCCAATCCATTCATCCCAATCCTTAGAAGAACCTCGTGGTATTAGTGATCCCATTCCATATAGTTTCTTCATCCTAGCCATAAAAATTGCAAGCTGTCGTAGTCATTATATTGGCAGATGAAAAAAATCTATTATTGTAGTTGCTGGCTTCAGACTGAAAATTTGGGACAATCCTAAAATTTATGCTTTATCCCTGAATGTTGCAGTGGATTGCCTTGTTTTTATCATTGAGCTTTTTTCAGGGTCCTATTTGTGTTAGTTCATTTTCCTGCATTAAATTAATATCCAGAATGATTCAATTTTCTTGTTTCTGTTTCAGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTCGATCAGAAAGCAATTCTACTTTTCAAATCTGGTTGAGGATTGTTGTCCCCTTGAAAAAGATGCCACCAGCTACTATGGCGAGCTTGCGATAATGCTACTACAACTGTTTCTTGTATGTATAATTTAGTCTGCCAGTGTAT

mRNA sequence

AAAAATAACAAAAATGACGTGGAAAATCATGAGAATAATTTTTTAAAAGAAAAAAAAAAAGGAAAAAGAGAAAAGGAATAGGAGGGAGAAGAGCGGGTAGAGAGGACGACTGGGCGACGGGAATCTTACAGAAGAGACGGCAGAGTGATAGTGGTTGAGAGCGATACCCTCTTCTTCTCTCTCACTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTACCCACCTAAACCAAACAAAAATATTCTCTCCCAAAACTCCATCACAATCATGAACCTAGAATCTCGACGCACCACCAATCATCCTCCACCTTCAATTGTGAAGACTGAATCTACAGATGATCGCAAACCCTCATCTCCCTCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACCGACATGCAGAAGGAAGCTATTGACGCTGCCATAGCCGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTCGATCAGAAAGCAATTCTACTTTTCAAATCTGGTTGAGGATTGTTGTCCCCTTGAAAAAGATGCCACCAGCTACTATGGCGAGCTTGCGATAATGCTACTACAACTGTTTCTTGTATGTATAATTTAGTCTGCCAGTGTAT

Coding sequence (CDS)

ATGAACCTAGAATCTCGACGCACCACCAATCATCCTCCACCTTCAATTGTGAAGACTGAATCTACAGATGATCGCAAACCCTCATCTCCCTCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACCGACATGCAGAAGGAAGCTATTGACGCTGCCATAGCCGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTCGATCAGAAAGCAATTCTACTTTTCAAATCTGGTTGA

Protein sequence

MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Homology

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BLAST of MELO3C006677 vs. NCBI nr
Match: XP_016898981.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo] >XP_016898982.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo] >XP_016898983.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 4.9e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF
Sbjct: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
Sbjct: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120

[Close]

BLAST of MELO3C006677 vs. NCBI nr
Match: XP_004134221.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN57126.1 hypothetical protein Csa_011724 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 3.3e-56
Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAF
Sbjct: 1   MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
Sbjct: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120

[Close]

BLAST of MELO3C006677 vs. NCBI nr
Match: XP_038904701.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 103/120 (85.83%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN ES R  ++PPP +VK ES DDRKPSS + +SKKIVIKSADMF+DMQKEAID AIAAF
Sbjct: 1   MNQESHR--SNPPPLMVKPES-DDRKPSSAAAVSKKIVIKSADMFSDMQKEAIDIAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKDIAEQIKK+FDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
Sbjct: 61  EKHSVEKDIAEQIKKQFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 117

[Close]

BLAST of MELO3C006677 vs. NCBI nr
Match: XP_022945423.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 7.5e-45
Identity = 95/120 (79.17%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN +S+R  ++P P +VK ES +DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1   MNHDSKR--SNPSPLMVKPES-EDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 61  EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]

BLAST of MELO3C006677 vs. NCBI nr
Match: XP_022973755.1 (dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 187.6 bits (475), Expect = 6.4e-44
Identity = 91/120 (75.83%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN +S+R+     PS++    ++DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1   MNHDSKRSN----PSLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 61  EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 116

[Close]

BLAST of MELO3C006677 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.4e-31
Identity = 63/88 (71.59%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 33  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRN 92
           + +K VIK+ADM  DMQ++AID A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRN
Sbjct: 2   VDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

Query: 93  FGSYVTHETNHFVYFYLDQKAILLFKSG 121
           FGSYVTHET HF+YFYL Q AILLFKSG
Sbjct: 62  FGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MELO3C006677 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 35  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFG 94
           +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 95  SYVTHETNHFVYFYLDQKAILLFKSG 121
           SYVTHET HF+YFYL Q AILLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MELO3C006677 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 35  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFG 94
           +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 95  SYVTHETNHFVYFYLDQKAILLFKSG 121
           SYVTHET HF+YFYL Q AILLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MELO3C006677 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 35  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFG 94
           +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 95  SYVTHETNHFVYFYLDQKAILLFKSG 121
           SYVTHET HF+YFYL Q AILLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MELO3C006677 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 35  KKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFG 94
           +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 95  SYVTHETNHFVYFYLDQKAILLFKSG 121
           SYVTHET HF+YFYL Q AILLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MELO3C006677 vs. ExPASy TrEMBL
Match: A0A1S4DSP2 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103483858 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF
Sbjct: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
Sbjct: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120

[Close]

BLAST of MELO3C006677 vs. ExPASy TrEMBL
Match: A0A0A0LAM1 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_3G159460 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAF
Sbjct: 1   MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
Sbjct: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120

[Close]

BLAST of MELO3C006677 vs. ExPASy TrEMBL
Match: A0A6J1G0U9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.6e-45
Identity = 95/120 (79.17%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN +S+R  ++P P +VK ES +DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1   MNHDSKR--SNPSPLMVKPES-EDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 61  EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]

BLAST of MELO3C006677 vs. ExPASy TrEMBL
Match: A0A6J1IC60 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 91/120 (75.83%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 1   MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
           MN +S+R+     PS++    ++DRKPSS +P+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1   MNHDSKRSN----PSLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61  EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120
           EKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 61  EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 116

[Close]

BLAST of MELO3C006677 vs. ExPASy TrEMBL
Match: A0A5D3CY39 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001160 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.0e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60
          MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF
Sbjct: 1  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGS 96
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNF +
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFAN 95

[Close]

BLAST of MELO3C006677 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.0e-39
Identity = 80/103 (77.67%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 23  DDRKPSSPS-----PLSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEKDIAEQIKKEF 82
           DDR+ S P      P  K+ VIKSADM  DMQKEAI+ AI+AFEK+SVEKDIAE IKKEF
Sbjct: 21  DDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEF 80

Query: 83  DKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 121
           DK HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 81  DKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 123

[Close]

BLAST of MELO3C006677 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-15
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 39  IKSADMFTDMQKEAIDAA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGS 98
           I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FGS
Sbjct: 119 ILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAFNLKKEFDKGYGPAWHCIVGSSFGS 178

Query: 99  YVTHETNHFVYFYLDQKAILLFKS 120
           +VTH T  F+YF +D+  +LLFK+
Sbjct: 179 FVTHSTGCFIYFSMDKLYVLLFKT 201

[Close]

BLAST of MELO3C006677 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 39  IKSADMFTDMQKEAIDAA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGS 98
           ++++DM    Q  A   +   + A    +  K +A  +KK+FD  +GP WHCIVG +FGS
Sbjct: 38  VRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGS 97

Query: 99  YVTHETNHFVYFYLDQKAILLFKS 120
           YVTH T  F+YF +D+  +LLFK+
Sbjct: 98  YVTHSTGGFLYFQIDKVYVLLFKT 121

[Close]

BLAST of MELO3C006677 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 67.8 bits (164), Expect = 6.9e-12
Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 33  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVG 92
           L  K +++ +DM   MQ +A+  A  A +   V   K IA  IKKEFD+ +G  W C+VG
Sbjct: 2   LEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVG 61

Query: 93  RNFGSYVTHETNHFVYFYLDQKAILLFK 119
            NFG + TH    F+YF L+    L+FK
Sbjct: 62  SNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of MELO3C006677 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 33  LSKKIVIKSADMFTDMQKEAIDAAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVG 92
           L  K V+   DM   M+++A+  A  A +   V +   IA  IKKEFD+++G  W CIVG
Sbjct: 2   LEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVG 61

Query: 93  RNFGSYVTHETNHFVYFYLDQKAILLFK 119
            +FGS+VTH +  F++F +    ILLFK
Sbjct: 62  THFGSFVTHCSGCFIHFSVGSLTILLFK 89

The following BLAST results are available for this feature:

BLAST of MELO3C006677 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898981.1	4.9e-60	100.00	PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo] >XP_016898982.1...	[more]
XP_004134221.1	3.3e-56	94.17	dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN57126.1 hypothetical pro...	[more]
XP_038904701.1	2.8e-47	85.83	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
XP_022945423.1	7.5e-45	79.17	dynein light chain 1, cytoplasmic-like [Cucurbita moschata]	[more]
XP_022973755.1	6.4e-44	75.83	dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]	[more]

BLAST of MELO3C006677 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q22799	6.4e-31	71.59	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q3MHR3	1.1e-30	72.09	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	1.1e-30	72.09	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	1.1e-30	72.09	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]
Q78P75	1.1e-30	72.09	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S...	[more]

BLAST of MELO3C006677 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DSP2	2.4e-60	100.00	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103483858 PE=3 SV=1	[more]
A0A0A0LAM1	1.6e-56	94.17	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_3G159460 PE=3 SV=1	[more]
A0A6J1G0U9	3.6e-45	79.17	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1	[more]
A0A6J1IC60	3.1e-44	75.83	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A5D3CY39	9.0e-44	97.89	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G0...	[more]

BLAST of MELO3C006677 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15930.1	3.0e-39	77.67	Dynein light chain type 1 family protein	[more]
AT5G20110.1	8.7e-15	50.00	Dynein light chain type 1 family protein	[more]
AT1G23220.1	2.8e-13	41.67	Dynein light chain type 1 family protein	[more]
AT1G52240.2	6.9e-12	40.91	RHO guanyl-nucleotide exchange factor 11	[more]
AT4G27360.1	2.0e-11	42.05	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 32..119 e-value: 3.7E-52 score: 189.3
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 36..119 e-value: 9.6E-38 score: 128.5
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 22..120
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 33..120 e-value: 1.3E-40 score: 139.4
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 32..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR11886:SF95	DYNEIN LIGHT CHAIN	coord: 22..120
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 86..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006677.1	MELO3C006677.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005875	microtubule associated complex