MELO3C006663.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C006663.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	translocator protein homolog
Location	chr06: 5279716 .. 5280632 (+)
RNA-Seq Expression	MELO3C006663.jh1
Synteny	MELO3C006663.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCTCTTTTCATAATCTCTCGATCCACTCTCCCTCTCTCTCAAATCAACAATGCCTTCTTCCAATCCCCCGTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTGCGTTCTCTCGCCGTCTCCGTCGCCATTCCCGTTTCCCTAACAATCGCCGTCATCTTCCTCTTTGGCCGCTCCTCTCGCCATTTCCCCAACCGTAACCGTCCGATTTGGATAGGCCCGCTCTGGCTCCTCCAACTTTCCTCCATTGGCTCCTCCTTCCTGGTCGGCCTCGCAGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCACCTTTCTCTCAGCGTCGTTTGGAGTCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCGTTTTTGTTCTGTGTTTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGGCGTTCGAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACGTATGTGTTCATTCATCTTTGATTGAGGTTTTTGATCATTTGGTGATTTTTGAAAAGATTTGTTTATCACATTGTTTTTGTAGTAGGACGTTGTAGAACTTTTTATCAGTAAAAAGAAATTGTTAGGAGATTGAAAGGAAAGGTTGTAGAAGTAGTGGTATATGATTTCGATTCATGAGTTATTGATCAAACATTAGGAGATTTTTATGATGAGTTTCTTGTTTCTTATTTGACAAGGATCTTGATTTCATGTTCACTTTTTACTTTATAGTGTACTTATATATATATATATATATATATATACACACTTTTCTGAAGTTTTGTTCAATTTAATGCATATATTTTGAATGTCGATTCAAATTTAGCTA

mRNA sequence

ATTCCTCTTTTCATAATCTCTCGATCCACTCTCCCTCTCTCTCAAATCAACAATGCCTTCTTCCAATCCCCCGTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTGCGTTCTCTCGCCGTCTCCGTCGCCATTCCCGTTTCCCTAACAATCGCCGTCATCTTCCTCTTTGGCCGCTCCTCTCGCCATTTCCCCAACCGTAACCGTCCGATTTGGATAGGCCCGCTCTGGCTCCTCCAACTTTCCTCCATTGGCTCCTCCTTCCTGGTCGGCCTCGCAGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCACCTTTCTCTCAGCGTCGTTTGGAGTCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCGTTTTTGTTCTGTGTTTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGGCGTTCGAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACGTATGTGTTCATTCATCTTTGATTGAGGTTTTTGATCATTTGGTGATTTTTGAAAAGATTTGTTTATCACATTGTTTTTGTAGTAGGACGTTGTAGAACTTTTTATCAGTAAAAAGAAATTGTTAGGAGATTGAAAGGAAAGGTTGTAGAAGTAGTGGTATATGATTTCGATTCATGAGTTATTGATCAAACATTAGGAGATTTTTATGATGAGTTTCTTGTTTCTTATTTGACAAGGATCTTGATTTCATGTTCACTTTTTACTTTATAGTGTACTTATATATATATATATATATATATATACACACTTTTCTGAAGTTTTGTTCAATTTAATGCATATATTTTGAATGTCGATTCAAATTTAGCTA

Coding sequence (CDS)

ATGCCTTCTTCCAATCCCCCGTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTGCGTTCTCTCGCCGTCTCCGTCGCCATTCCCGTTTCCCTAACAATCGCCGTCATCTTCCTCTTTGGCCGCTCCTCTCGCCATTTCCCCAACCGTAACCGTCCGATTTGGATAGGCCCGCTCTGGCTCCTCCAACTTTCCTCCATTGGCTCCTCCTTCCTGGTCGGCCTCGCAGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCACCTTTCTCTCAGCGTCGTTTGGAGTCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCGTTTTTGTTCTGTGTTTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGGCGTTCGAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACGTATGTGTTCATTCATCTTTGA

Protein sequence

MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL

Homology

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BLAST of MELO3C006663.jh1 vs. NCBI nr
Match: XP_016898980.1 (PREDICTED: translocator protein homolog [Cucumis melo] >KAA0049494.1 translocator protein-like protein [Cucumis melo var. makuwa] >TYK16173.1 translocator protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 343 bits (879), Expect = 8.04e-119
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of MELO3C006663.jh1 vs. NCBI nr
Match: XP_004134488.1 (translocator protein homolog [Cucumis sativus])

HSP 1 Score: 327 bits (839), Expect = 1.01e-112
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIA IFLFGRSSRH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWL+QLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           VIAFLFCVLD VTLFACY AF+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of MELO3C006663.jh1 vs. NCBI nr
Match: XP_038878873.1 (translocator protein homolog [Benincasa hispida])

HSP 1 Score: 325 bits (833), Expect = 8.32e-112
Identity = 161/172 (93.60%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+SLTIAVIFLFGRS+RHFPNRNRPIWI
Sbjct: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSARHFPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWLL LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           V+AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSAVTYVFI L
Sbjct: 121 VLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of MELO3C006663.jh1 vs. NCBI nr
Match: KGN57143.2 (hypothetical protein Csa_010693 [Cucumis sativus])

HSP 1 Score: 320 bits (819), Expect = 9.87e-110
Identity = 159/166 (95.78%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIA IFLFGRSSRH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWL+QLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVT 166
           VIAFLFCVLD VTLFACY AF+RVNPFAKDLMKPCLAWTAYLSAVT
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVT 166

[Close]

BLAST of MELO3C006663.jh1 vs. NCBI nr
Match: XP_022973726.1 (translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator protein homolog [Cucurbita maxima])

HSP 1 Score: 306 bits (785), Expect = 1.67e-104
Identity = 150/170 (88.24%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP++LTIAVIFLFGRSSRHFPNRNRPIW+ P
Sbjct: 2   SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 61

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LWLL LSSI SSFL+GLAAWLVWADGGFH GSNALPLYIAHLSLSVVW+PLVLVIR++++
Sbjct: 62  LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 121

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           AFLFCVLDFVTL+ACYR F+RVNPFAKDL+KPCLAWTAYL AVTYVFI L
Sbjct: 122 AFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-30
Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 0


Query: 9   KSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQL 68
           K + + K   AKR L+SL V+VA PV +T+   +  G S  +        WI PLWLL  
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCV 128
           + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW P+   + S V      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAV 166
                LF CY+AF  ++P A +L+KPCLAW A+++AV
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy Swiss-Prot
Match: E2RDM9 (Translocator protein 2 OS=Canis lupus familiaris OX=9615 GN=TSPO2 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 43/145 (29.66%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 27  AVSVAIPVSLTIAVIFLF-GRSSRHFPNRNRPIWIGPLWLLQLSSIGSSFLVGLAAWLVW 86
           A+ VA+P    I V  L   R  R +    +P W  P  +L    I   F++G A++LVW
Sbjct: 6   AIFVALPHLGPILVSLLTRHRMIRWYDIPKKPPWCPPHKVLLAGWITIYFVMGYASYLVW 65

Query: 87  AD-GGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVV--IAFLFCVLDFVTLFACYRAFE 146
            D GG  G   ALPL +  + L+V W+ L+    +    +A L  +L +  + +    + 
Sbjct: 66  KDLGGGFGRPLALPLGLYAVQLAVSWAVLIFFFAAHAHGLALLHMLLLYGLVVSTALIWH 125

Query: 147 RVNPFAKDLMKPCLAWTAYLSAVTY 168
            +N  A  L+ P LAW    +++ Y
Sbjct: 126 PINKLAAVLLLPYLAWLTVTASIAY 150

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CWC4 (Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001010 PE=3 SV=1)

HSP 1 Score: 343 bits (879), Expect = 3.89e-119
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DTF2 (translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1)

HSP 1 Score: 343 bits (879), Expect = 3.89e-119
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L583 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154290 PE=3 SV=1)

HSP 1 Score: 327 bits (839), Expect = 4.90e-113
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIA IFLFGRSSRH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWL+QLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           VIAFLFCVLD VTLFACY AF+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy TrEMBL
Match: A0A6J1ICB9 (translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV=1)

HSP 1 Score: 306 bits (785), Expect = 8.10e-105
Identity = 150/170 (88.24%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP++LTIAVIFLFGRSSRHFPNRNRPIW+ P
Sbjct: 2   SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 61

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LWLL LSSI SSFL+GLAAWLVWADGGFH GSNALPLYIAHLSLSVVW+PLVLVIR++++
Sbjct: 62  LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 121

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           AFLFCVLDFVTL+ACYR F+RVNPFAKDL+KPCLAWTAYL AVTYVFI L
Sbjct: 122 AFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of MELO3C006663.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FZS9 (translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 SV=1)

HSP 1 Score: 303 bits (775), Expect = 1.81e-102
Identity = 149/170 (87.65%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP++LTIAVIFLFGRSSRHFPNRNRPIW+ P
Sbjct: 57  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 116

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LWLL LSSI SSFL+GLAAWLVWADGGFH GSNALPLYIAHLSLSVVW+PLVLVIR+ ++
Sbjct: 117 LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRARLL 176

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172
           AFLFCVLD VTL+ACYR F+RVNPFAKDL+KPCLAWTAYL AVTYVFI L
Sbjct: 177 AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of MELO3C006663.jh1 vs. TAIR 10
Match: AT2G47770.1 (TSPO(outer membrane tryptophan-rich sensory protein)-related )

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-31
Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 0


Query: 9   KSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQL 68
           K + + K   AKR L+SL V+VA PV +T+   +  G S  +        WI PLWLL  
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCV 128
           + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW P+   + S V      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAV 166
                LF CY+AF  ++P A +L+KPCLAW A+++AV
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

The following BLAST results are available for this feature:

BLAST of MELO3C006663.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898980.1	8.04e-119	100.00	PREDICTED: translocator protein homolog [Cucumis melo] >KAA0049494.1 translocato...	[more]
XP_004134488.1	1.01e-112	95.35	translocator protein homolog [Cucumis sativus]	[more]
XP_038878873.1	8.32e-112	93.60	translocator protein homolog [Benincasa hispida]	[more]
KGN57143.2	9.87e-110	95.78	hypothetical protein Csa_010693 [Cucumis sativus]	[more]
XP_022973726.1	1.67e-104	88.24	translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator pro...	[more]

BLAST of MELO3C006663.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82245	3.5e-30	43.95	Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1	[more]
E2RDM9	1.5e-04	29.66	Translocator protein 2 OS=Canis lupus familiaris OX=9615 GN=TSPO2 PE=1 SV=1	[more]

BLAST of MELO3C006663.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWC4	3.89e-119	100.00	Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DTF2	3.89e-119	100.00	translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1	[more]
A0A0A0L583	4.90e-113	95.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154290 PE=3 SV=1	[more]
A0A6J1ICB9	8.10e-105	88.24	translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV...	[more]
A0A6J1FZS9	1.81e-102	87.65	translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 ...	[more]

BLAST of MELO3C006663.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47770.1	2.5e-31	43.95	TSPO(outer membrane tryptophan-rich sensory protein)-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038330	TspO/MBR-related superfamily	GENE3D	1.20.1260.100	TspO/MBR protein	coord: 20..172 e-value: 5.2E-21 score: 76.8
IPR004307	TspO/MBR-related protein	PFAM	PF03073	TspO_MBR	coord: 29..168 e-value: 1.8E-20 score: 73.4
IPR004307	TspO/MBR-related protein	PIRSF	PIRSF005859	PBR	coord: 15..172 e-value: 1.3E-30 score: 103.9
IPR004307	TspO/MBR-related protein	PANTHER	PTHR10057	PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR	coord: 4..171
IPR004307	TspO/MBR-related protein	CDD	cd15904	TSPO_MBR	coord: 26..170 e-value: 2.13087E-23 score: 87.9376
None	No IPR available	PANTHER	PTHR10057:SF6	TSPO/MBR FAMILY PROTEIN	coord: 4..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006663.jh1.t1	MELO3C006663.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane