MELO3C006371 (gene) Melon (DHL92) v4

Overview


Name	MELO3C006371
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Auxin-responsive protein
Location	chr06: 2840412 .. 2843371 (-)
RNA-Seq Expression	MELO3C006371
Synteny	MELO3C006371

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCAATGGCAGTACGGTCTACAGACTACAGAGAGGAGAGAGAGAGAGAGAGAGAGATCCGTGAAGGAGACATGAATCGTGTTGAGATTCAGCTCAAAAGGCAAATTCTTGTCGACAACAATGGAGAACCATGGTGGGTAACTGCTATCACTGGTAGCCGCACTACCAGACATCTGGGTCCCATCATCATCACACCCACCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCATACTCATTCCATCTTCTTCCTTTCAATCCTACCATTTTTCTGTTTTACTCCATCTCCATTCCCCCTCCATGGAACCACCTCTAGTTTTAATGCCTACCACCGGCATTGCCAGCGCTGGCGGCTCATCCGGCGCCTCCAATGATGAGAATTCTGTTTCCAAAGCTAAGGAATTGAACACACACCAGGCGGATTTGTCTTCTGAGGAGTTTTCTTCTTCCCCTGTTGAAGCTGAGCTCGAATTAGGGCTAGGGCTCAGTCTTGGAAATGGGGTTTCTGCTGGAAAGGGAAAACAGGGTGTTTGGGGTGAGCGCGGCCGGATATTGACGGCGAAAGATTTTCCTTCGGCCATCTCTCCTGGCGGGTCGTCTTCTTCTTCTTCTTCGGCTAGATTCTCTGGCAGACCTGTTGCTATTTCTGGTGTCAAGAGGGCGGCGGAACCTGTTTCCCATGACGGCGGTTCTTCTCCTCCGGCTGTCAGGTTGGTGGGTTGCTCTGTTTATATTTGATTGTTGGTAAAAGAGGATGGATATGGAATGAGTTAGGTGAATGAGCACTGTGAAGACTAATGAACTTTTCTCTTTCAAGAAATGAAGAATATTAGAATCTTTGATTCTTAATTCCTCAAGCTGAAATCCTGAACTGTTTGTTAGTTTTGCATGTTTAATTATACTAGTTAACAGTAGAAAAGAGATGGTCTCCTTGTTGCACTGTTAGAGTAGAAATAGTAATCGATGAACAGTTGTCTTTTTTTATAGGATCTTCCATAACATGCATATGCTAGAAGTGTGTATGATCCTGTTACAATATAAATAGTAATCGATGAACTGTTGGCTTTTAATAAGGTCTTCCATAACATGCATATAAAAAGTTACTATTTGGTTAAATCTCACAAAATCTCCATTGTAGTGTCATTAAGGTCGGTCTGAGTCTTGCTATAGAGTATAGATTGGCTGCACAAATTCATGGCAATACCAATCGAGTCTCTTTTGTCTTGATGTAGGCGGATGGGATGTTGATCTAAACATTCCCTGATGCTTACTCATTAGTCATGAAACTGGATATCCCCTTTTTATTTTCATCGAAGCTTGTCTTTCCAATTGATTACTATGACCTATTCTATTATTCTTTGAATCCATATCCTGATGCTTTCAAGTTTTTTCTATTTGTTTTCTTTTTTACTTTCGAATGAACCGTAAGCAGTCAGGTGGTGGGATGGCCGCCCTTAAGAGCTTACAGAATTAACAGCCTGGTTAACCAAGCTAAAAATCAAAAGGCAGGGGATGAAAAGGAGCTGCTTTCTCTCAAAAATAGGTCAAATGGTGTTTCAGAGAAGATCCAGGATGGCAAAAATACAAGTGCCACTGATACTGAAAAGGGCCCTGTAGGTTTTGTGAAAGTGTACATGGACGGAGTTCTAATTGGCAGGAAAGTGGACTTGAATGCCCATTCTTGCTATGAGACTTTGGCTCTGATGCTCGAGGACATGTTTTTTAAGTCTGCGGGAAGTGTCCCATCCACCGGTTAGTTGCTTCGAAAGATCATCTATATGCATCTATCTATGGATAGTTGATAACTGTGAATGAGATTATTTGTACTGACCAAGAGTTGTCTTTCTTTTATGTTTAGGCTTAAGTGGAGGTCAGGATGAACAAGCACCAAAACTCTCAAAACTTCTGACTGGCTCCTCTGAGTTTGTGCTCACCTATGAAGATAAAGAGGGAGACTGGTTGTTGGTTGGGGATGTTCCTTGGAGGTATGCACTCACTAATGAAAAAGCATAGTGTGTAGTTCATATTCCTACTTCCTTCACGGTTTACTTATTTACCTTTCATTTCTGCTTTCATTTTTTCTATTAGGATGTTCCTTGGCTCAGTTAAGAAACTTCGAATCATGAGGACATCTGAGGCAAAGGGACTCGGTATGTTTTCTCATAACCCAATCTTGTAGTTGATTTTGATACCGTTGTTTTAGTTTCTAGTACTCCATGTCCGTAATCTAATTAATAAAACCATCCACAGCTCCAAGATGTCAAGGAAGAAGTGAGAGAAATGGAATCAAGCCCATTTAGAACCATTGTTTTAACCCTGGCCATGTGAAGATCATGTGGAGTTAAGTTGGTCCACATGAGTAGAGATAGAAAAAAAGAGAGTGATTTTGACGATCTTATTCTTTTTTGCTTGTTTTTTTTTGTTCTCATTTATGGTTCTTGATTTTTTTTGAATGGTTTTCTAAACCATTAACAATCCCCCCTTCCCAAAGAAAGAAAGAAAGAAAGAAAGAAATCATCTTATACAATGCTACCCTACAGGCTTATGAACTCGGCTATGATTTACGACTCTCTTCGCTTAAATCGACTAAAGTTGTTTTCTTCTCAAGGGAAAGCTGGTATCAGTTTCGAACTTGTGATACTTTACTGTGTTGGTCGACTATCTTTTACAAGTGCATTTCTTATGTTTGTGAATCGCTTCCTAATGTATCTTGTAACATGTTAAGAAGGTGAAGATGGTTTCATCTGTTGCTTTATGTTTGTTCTTTTCAATTTGAAACTCCATTGTGGATTAAAGCTTATATGTTGTCTTATACCTTTTAAGACCTTTGCTCATGACCCTGACTCCATTACTTCTTCTCATTGAGAAGCAACTTGAGTCTGATGCGTTGATGGAATTTATCTGTCCTAAAAAAAGGTGATGTGATTTGATTCCATTTTGATGACTAC

mRNA sequence

AATTCCAATGGCAGTACGGTCTACAGACTACAGAGAGGAGAGAGAGAGAGAGAGAGAGATCCGTGAAGGAGACATGAATCGTGTTGAGATTCAGCTCAAAAGGCAAATTCTTGTCGACAACAATGGAGAACCATGGTGGGTAACTGCTATCACTGGTAGCCGCACTACCAGACATCTGGGTCCCATCATCATCACACCCACCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCATACTCATTCCATCTTCTTCCTTTCAATCCTACCATTTTTCTGTTTTACTCCATCTCCATTCCCCCTCCATGGAACCACCTCTAGTTTTAATGCCTACCACCGGCATTGCCAGCGCTGGCGGCTCATCCGGCGCCTCCAATGATGAGAATTCTGTTTCCAAAGCTAAGGAATTGAACACACACCAGGCGGATTTGTCTTCTGAGGAGTTTTCTTCTTCCCCTGTTGAAGCTGAGCTCGAATTAGGGCTAGGGCTCAGTCTTGGAAATGGGGTTTCTGCTGGAAAGGGAAAACAGGGTGTTTGGGGTGAGCGCGGCCGGATATTGACGGCGAAAGATTTTCCTTCGGCCATCTCTCCTGGCGGGTCGTCTTCTTCTTCTTCTTCGGCTAGATTCTCTGGCAGACCTGTTGCTATTTCTGGTGTCAAGAGGGCGGCGGAACCTGTTTCCCATGACGGCGGTTCTTCTCCTCCGGCTGTCAGTCAGGTGGTGGGATGGCCGCCCTTAAGAGCTTACAGAATTAACAGCCTGGTTAACCAAGCTAAAAATCAAAAGGCAGGGGATGAAAAGGAGCTGCTTTCTCTCAAAAATAGGTCAAATGGTGTTTCAGAGAAGATCCAGGATGGCAAAAATACAAGTGCCACTGATACTGAAAAGGGCCCTGTAGGTTTTGTGAAAGTGTACATGGACGGAGTTCTAATTGGCAGGAAAGTGGACTTGAATGCCCATTCTTGCTATGAGACTTTGGCTCTGATGCTCGAGGACATGTTTTTTAAGTCTGCGGGAAGTGTCCCATCCACCGGCTTAAGTGGAGGTCAGGATGAACAAGCACCAAAACTCTCAAAACTTCTGACTGGCTCCTCTGAGTTTGTGCTCACCTATGAAGATAAAGAGGGAGACTGGTTGTTGGTTGGGGATGTTCCTTGGAGGATGTTCCTTGGCTCAGTTAAGAAACTTCGAATCATGAGGACATCTGAGGCAAAGGGACTCGCTCCAAGATGTCAAGGAAGAAGTGAGAGAAATGGAATCAAGCCCATTTAGAACCATTGTTTTAACCCTGGCCATGTGAAGATCATGTGGAGTTAAGTTGGTCCACATGAGTAGAGATAGAAAAAAAGAGAGTGATTTTGACGATCTTATTCTTTTTTGCTTGTTTTTTTTTGTTCTCATTTATGGTTCTTGATTTTTTTTGAATGGTTTTCTAAACCATTAACAATCCCCCCTTCCCAAAGAAAGAAAGAAAGAAAGAAAGAAATCATCTTATACAATGCTACCCTACAGGCTTATGAACTCGGCTATGATTTACGACTCTCTTCGCTTAAATCGACTAAAGTTGTTTTCTTCTCAAGGGAAAGCTGGTATCAGTTTCGAACTTGTGATACTTTACTGTGTTGGTCGACTATCTTTTACAAGTGCATTTCTTATGTTTGTGAATCGCTTCCTAATGTATCTTGTAACATGTTAAGAAGGTGAAGATGGTTTCATCTGTTGCTTTATGTTTGTTCTTTTCAATTTGAAACTCCATTGTGGATTAAAGCTTATATGTTGTCTTATACCTTTTAAGACCTTTGCTCATGACCCTGACTCCATTACTTCTTCTCATTGAGAAGCAACTTGAGTCTGATGCGTTGATGGAATTTATCTGTCCTAAAAAAAGGTGATGTGATTTGATTCCATTTTGATGACTAC

Coding sequence (CDS)

ATGGAACCACCTCTAGTTTTAATGCCTACCACCGGCATTGCCAGCGCTGGCGGCTCATCCGGCGCCTCCAATGATGAGAATTCTGTTTCCAAAGCTAAGGAATTGAACACACACCAGGCGGATTTGTCTTCTGAGGAGTTTTCTTCTTCCCCTGTTGAAGCTGAGCTCGAATTAGGGCTAGGGCTCAGTCTTGGAAATGGGGTTTCTGCTGGAAAGGGAAAACAGGGTGTTTGGGGTGAGCGCGGCCGGATATTGACGGCGAAAGATTTTCCTTCGGCCATCTCTCCTGGCGGGTCGTCTTCTTCTTCTTCTTCGGCTAGATTCTCTGGCAGACCTGTTGCTATTTCTGGTGTCAAGAGGGCGGCGGAACCTGTTTCCCATGACGGCGGTTCTTCTCCTCCGGCTGTCAGTCAGGTGGTGGGATGGCCGCCCTTAAGAGCTTACAGAATTAACAGCCTGGTTAACCAAGCTAAAAATCAAAAGGCAGGGGATGAAAAGGAGCTGCTTTCTCTCAAAAATAGGTCAAATGGTGTTTCAGAGAAGATCCAGGATGGCAAAAATACAAGTGCCACTGATACTGAAAAGGGCCCTGTAGGTTTTGTGAAAGTGTACATGGACGGAGTTCTAATTGGCAGGAAAGTGGACTTGAATGCCCATTCTTGCTATGAGACTTTGGCTCTGATGCTCGAGGACATGTTTTTTAAGTCTGCGGGAAGTGTCCCATCCACCGGCTTAAGTGGAGGTCAGGATGAACAAGCACCAAAACTCTCAAAACTTCTGACTGGCTCCTCTGAGTTTGTGCTCACCTATGAAGATAAAGAGGGAGACTGGTTGTTGGTTGGGGATGTTCCTTGGAGGATGTTCCTTGGCTCAGTTAAGAAACTTCGAATCATGAGGACATCTGAGGCAAAGGGACTCGCTCCAAGATGTCAAGGAAGAAGTGAGAGAAATGGAATCAAGCCCATTTAG

Protein sequence

MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGLGLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSEKIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI

Homology

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BLAST of MELO3C006371 vs. NCBI nr
Match: XP_008438451.1 (PREDICTED: auxin-responsive protein IAA13 isoform X1 [Cucumis melo])

HSP 1 Score: 622.5 bits (1604), Expect = 2.1e-174
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGLAPRCQGRSERNGIKPI 323
           SEAKGLAPRCQGRSERNGIKPI
Sbjct: 301 SEAKGLAPRCQGRSERNGIKPI 322

[Close]

BLAST of MELO3C006371 vs. NCBI nr
Match: XP_004134035.1 (auxin-responsive protein IAA13 isoform X2 [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 3.8e-168
Identity = 311/322 (96.58%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPL LMPTTGIASAGGSSGASNDENSVSKAKELNTHQ DLSSEEFSS PVEAELELGL
Sbjct: 1   MEPPLGLMPTTGIASAGGSSGASNDENSVSKAKELNTHQTDLSSEEFSSPPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQG+WGERGRILTAKDFPSAISPGG SSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGLWGERGRILTAKDFPSAISPGG-SSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPP+RAYRINSL+NQAKNQ+AGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPIRAYRINSLINQAKNQRAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDT KGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKS GSV
Sbjct: 181 KIQDGKNTSATDTVKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSTGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGL+GGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLNGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGLAPRCQGRSERNGIKPI 323
           SEAKGLAPRCQGRSERNGIKPI
Sbjct: 301 SEAKGLAPRCQGRSERNGIKPI 321

[Close]

BLAST of MELO3C006371 vs. NCBI nr
Match: XP_008438452.1 (PREDICTED: auxin-responsive protein IAA13 isoform X2 [Cucumis melo])

HSP 1 Score: 589.0 bits (1517), Expect = 2.5e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGL 307
           SEAKGL
Sbjct: 301 SEAKGL 306

[Close]

BLAST of MELO3C006371 vs. NCBI nr
Match: TYK17353.1 (DNA mismatch repair protein MSH1 [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.5e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGL 307
           SEAKGL
Sbjct: 301 SEAKGL 306

[Close]

BLAST of MELO3C006371 vs. NCBI nr
Match: KAA0049205.1 (DNA mismatch repair protein MSH1 [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.5e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGL 307
           SEAKGL
Sbjct: 301 SEAKGL 306

[Close]

BLAST of MELO3C006371 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-62
Identity = 143/276 (51.81%), Postives = 172/276 (62.32%), Query Frame = 0


Query: 53  EAELELGLGLSLGNGVSAGKGKQ---GVWGERGRILTAKDFPSAISPGGSSSSSSSARFS 112
           E+ELELGLGLSLG G +A  GK    G WGERGR+LTAKDFPS                 
Sbjct: 11  ESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV---------------- 70

Query: 113 GRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELL 172
                  G KRAA+  SH G S P + SQVVGWPP+ ++R+NSLVN    + A +E+E  
Sbjct: 71  -------GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEE-- 130

Query: 173 SLKNRSNGVSEKIQDGKNTSATDTEKG--PVGFVKVYMDGVLIGRKVDLNAHSCYETLAL 232
                     +K++D +    T    G   VGF+KV MDGV IGRKVDLNAHS YE LA 
Sbjct: 131 -------AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQ 190

Query: 233 MLEDMFFK-SAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWR 292
            LEDMFF+ + G+V       G   Q  K  +LL GSSEFVLTYEDKEGDW+LVGDVPWR
Sbjct: 191 TLEDMFFRTNPGTV-------GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWR 247

Query: 293 MFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI 323
           MF+ SVK+LR+M+TSEA GLA R Q  +ER   +P+
Sbjct: 251 MFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 247

[Close]

BLAST of MELO3C006371 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.2e-57
Identity = 139/283 (49.12%), Postives = 169/283 (59.72%), Query Frame = 0


Query: 48  SSSPVEAELELGLGLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSAR 107
           S+ P E+ELELGLGLSLG          G W ERGRILTAKDFPS               
Sbjct: 12  SNLPAESELELGLGLSLGG---------GAWKERGRILTAKDFPSV-------------- 71

Query: 108 FSGRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQ-----AKNQKA 167
                    G KR+AE  SH  G+SPP  SQVVGWPP+  +R+NSLVN      A+ ++ 
Sbjct: 72  ---------GSKRSAESSSHQ-GASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEG 131

Query: 168 GDEKELL---SLKNRSNGVSEKIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAH 227
             EK+++    LK+ S  V+ K+Q              +GFVKV MDGV IGRKVD+ AH
Sbjct: 132 DGEKKVVKNDELKDVSMKVNPKVQG-------------LGFVKVNMDGVGIGRKVDMRAH 191

Query: 228 SCYETLALMLEDMFFKSAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLL 287
           S YE LA  LE+MFF         G++G    +  K  +LL GSS+FVLTYEDKEGDW+L
Sbjct: 192 SSYENLAQTLEEMFF---------GMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWML 239

Query: 288 VGDVPWRMFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI 323
           VGDVPWRMF+ SVK+LRIM TSEA GLAPR Q + +R    P+
Sbjct: 252 VGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239

[Close]

BLAST of MELO3C006371 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.1e-44
Identity = 132/298 (44.30%), Postives = 167/298 (56.04%), Query Frame = 0


Query: 12  GIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGLGLSLGNGVSAG 71
           G +++G +S  SNDEN V   ++             SSSP+  ELELGL LSLG      
Sbjct: 3   GGSASGSASALSNDENLVVSCED-------------SSSPIGNELELGLTLSLGRK---- 62

Query: 72  KGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKRAAEPVSHDGGS 131
                  G R   + A D         SSSSSSS+  S R   I+G+KR A+ ++   G 
Sbjct: 63  -------GYRDCRVYADD---------SSSSSSSSSLS-RASVIAGIKRTADSMAATSG- 122

Query: 132 SPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEK-ELLSLKNRSNGVSEKIQDGKNTSA 191
                 QVVGWPP+R YR+NS+VNQAK     D   E+    N++   S K+++      
Sbjct: 123 ------QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSM---- 182

Query: 192 TDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFK-SAGSVPSTGLSGGQ 251
                    FVKV MDG+ IGRK+DLNAH CYE+L+  LE+MF K   GS   T  + G 
Sbjct: 183 ---------FVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGS--RTLETDGH 242

Query: 252 DEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRTSEAKGLA 308
            E   K+  L  GSS  VLTYEDKEGDW+LVGDVPW MF+GSV++LRIM+TSEA G A
Sbjct: 243 METPVKI--LPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242

[Close]

BLAST of MELO3C006371 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 8.8e-43
Identity = 125/280 (44.64%), Postives = 160/280 (57.14%), Query Frame = 0


Query: 41  DLSSEEFSSSPVEAELELGLGLSLGNGVSAGKGKQGVWGERGRILTAKDF--PSAISPGG 100
           +  +EE   S    + EL LGLSLG+     K +Q       RILTA+D    +A+SP  
Sbjct: 17  EAEAEEVEESSAGDDEELELGLSLGS-----KKQQQQQHAPCRILTARDLQPAAALSPDS 76

Query: 101 SSSSSSSARFSGRPVAISGVKRAAEPVSHD-----GGSSPPAVSQVVGWPPLRAYRINSL 160
           S SSSS A       A +G KRA  P +           P +   VVGWPP+R +R+NSL
Sbjct: 77  SVSSSSPA-----AAAAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSL 136

Query: 161 VNQAKNQKAGDEKELLSLKNRSNGVSEKIQDGKNTSATDTEKGPV-GFVKVYMDGVLIGR 220
            NQAK   +  E +        + V +  ++G+       +KG V G+VKV MDG +IGR
Sbjct: 137 FNQAKENTS--ETDTKKTATNESDVQKDKEEGE-------KKGRVAGWVKVNMDGEVIGR 196

Query: 221 KVDLNAHSCYETLALMLEDMFFKSAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYED 280
           KVDLNAH  Y+TLAL LE MF K     PS GL    +  +    KLL  S+E+ LTYED
Sbjct: 197 KVDLNAHRSYKTLALALELMFTK-----PSIGLCASHNTNS---LKLLDNSAEYQLTYED 256

Query: 281 KEGDWLLVGDVPWRMFLGSVKKLRIMRTSEAKGLAPRCQG 313
           ++GDW+LVGDVPW MF+ SVK+LRIMRTS+A GL  R QG
Sbjct: 257 RDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQG 269

[Close]

BLAST of MELO3C006371 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 4.4e-42
Identity = 130/304 (42.76%), Postives = 170/304 (55.92%), Query Frame = 0


Query: 17  GGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGLGLSLGNGVSAGKGKQG 76
           GG++G +  E   ++A+          +EE   S    + EL LGLSLG+     K +Q 
Sbjct: 3   GGAAGPTAGEPPGTEAE----------AEEVEESSAGDDEELELGLSLGS-----KKQQQ 62

Query: 77  VWGERGRILTAKDF--PSAISPGGSSSSSSSARFSGRPVAISGVKRAAEPVSHD-----G 136
                 RILTA+D    +A+SP  S SSSS A       A +G KRA  P +        
Sbjct: 63  QQHAPCRILTARDLQPAAALSPDSSVSSSSPA-----AAAAAGGKRAEGPTATTSPGTVA 122

Query: 137 GSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSEKIQDGKNTS 196
              P +   VVGWPP+R +R+NSL NQAK   +  E +        + V +  ++G+   
Sbjct: 123 SGHPHSSFGVVGWPPIRQFRMNSLFNQAKENTS--ETDTKKTATNESDVQKDKEEGE--- 182

Query: 197 ATDTEKGPV-GFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSVPSTGLSGG 256
               +KG V G+VKV MDG +IGRKVDLNAH  Y+TLAL LE MF K     PS GL   
Sbjct: 183 ----KKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTK-----PSIGLCAS 242

Query: 257 QDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRTSEAKGLAP 313
            +  +    KLL  S+E+ LTYED++GDW+LVGDVPW MF+ SVK+LRIMRTS+A GL  
Sbjct: 243 HNTNS---LKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQ 269

[Close]

BLAST of MELO3C006371 vs. ExPASy TrEMBL
Match: A0A1S3AW30 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483540 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.0e-174
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGLAPRCQGRSERNGIKPI 323
           SEAKGLAPRCQGRSERNGIKPI
Sbjct: 301 SEAKGLAPRCQGRSERNGIKPI 322

[Close]

BLAST of MELO3C006371 vs. ExPASy TrEMBL
Match: A0A0A0L9M5 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G134550 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.8e-168
Identity = 311/322 (96.58%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPL LMPTTGIASAGGSSGASNDENSVSKAKELNTHQ DLSSEEFSS PVEAELELGL
Sbjct: 1   MEPPLGLMPTTGIASAGGSSGASNDENSVSKAKELNTHQTDLSSEEFSSPPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQG+WGERGRILTAKDFPSAISPGG SSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGLWGERGRILTAKDFPSAISPGG-SSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPP+RAYRINSL+NQAKNQ+AGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPIRAYRINSLINQAKNQRAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDT KGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKS GSV
Sbjct: 181 KIQDGKNTSATDTVKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSTGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGL+GGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLNGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGLAPRCQGRSERNGIKPI 323
           SEAKGLAPRCQGRSERNGIKPI
Sbjct: 301 SEAKGLAPRCQGRSERNGIKPI 321

[Close]

BLAST of MELO3C006371 vs. ExPASy TrEMBL
Match: A0A5D3CZM2 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002100 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGL 307
           SEAKGL
Sbjct: 301 SEAKGL 306

[Close]

BLAST of MELO3C006371 vs. ExPASy TrEMBL
Match: A0A5A7U6B6 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004430 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGL 307
           SEAKGL
Sbjct: 301 SEAKGL 306

[Close]

BLAST of MELO3C006371 vs. ExPASy TrEMBL
Match: A0A1S3AWI1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483540 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60
           MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL
Sbjct: 1   MEPPLVLMPTTGIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGL 60

Query: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120
           GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR
Sbjct: 61  GLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKR 120

Query: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180
           AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE
Sbjct: 121 AAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELLSLKNRSNGVSE 180

Query: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240
           KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV
Sbjct: 181 KIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFKSAGSV 240

Query: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300
           PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT
Sbjct: 241 PSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRT 300

Query: 301 SEAKGL 307
           SEAKGL
Sbjct: 301 SEAKGL 306

[Close]

BLAST of MELO3C006371 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-64
Identity = 145/276 (52.54%), Postives = 173/276 (62.68%), Query Frame = 0


Query: 53  EAELELGLGLSLGNGVSAGKGKQ---GVWGERGRILTAKDFPSAISPGGSSSSSSSARFS 112
           E+ELELGLGLSLG G +A  GK    G WGERGR+LTAKDFPS                 
Sbjct: 11  ESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV---------------- 70

Query: 113 GRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELL 172
                  G KRAA+  SH  GSSPP  SQVVGWPP+ ++R+NSLVN    + A +E+E  
Sbjct: 71  -------GSKRAADSASH-AGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEE-- 130

Query: 173 SLKNRSNGVSEKIQDGKNTSATDTEKG--PVGFVKVYMDGVLIGRKVDLNAHSCYETLAL 232
                     +K++D +    T    G   VGF+KV MDGV IGRKVDLNAHS YE LA 
Sbjct: 131 -------AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQ 190

Query: 233 MLEDMFFK-SAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWR 292
            LEDMFF+ + G+V       G   Q  K  +LL GSSEFVLTYEDKEGDW+LVGDVPWR
Sbjct: 191 TLEDMFFRTNPGTV-------GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWR 246

Query: 293 MFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI 323
           MF+ SVK+LR+M+TSEA GLA R Q  +ER   +P+
Sbjct: 251 MFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 246

[Close]

BLAST of MELO3C006371 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-64
Identity = 145/276 (52.54%), Postives = 173/276 (62.68%), Query Frame = 0


Query: 53  EAELELGLGLSLGNGVSAGKGKQ---GVWGERGRILTAKDFPSAISPGGSSSSSSSARFS 112
           E+ELELGLGLSLG G +A  GK    G WGERGR+LTAKDFPS                 
Sbjct: 11  ESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV---------------- 70

Query: 113 GRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELL 172
                  G KRAA+  SH  GSSPP  SQVVGWPP+ ++R+NSLVN    + A +E+E  
Sbjct: 71  -------GSKRAADSASH-AGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEE-- 130

Query: 173 SLKNRSNGVSEKIQDGKNTSATDTEKG--PVGFVKVYMDGVLIGRKVDLNAHSCYETLAL 232
                     +K++D +    T    G   VGF+KV MDGV IGRKVDLNAHS YE LA 
Sbjct: 131 -------AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQ 190

Query: 233 MLEDMFFK-SAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWR 292
            LEDMFF+ + G+V       G   Q  K  +LL GSSEFVLTYEDKEGDW+LVGDVPWR
Sbjct: 191 TLEDMFFRTNPGTV-------GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWR 246

Query: 293 MFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI 323
           MF+ SVK+LR+M+TSEA GLA R Q  +ER   +P+
Sbjct: 251 MFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 246

[Close]

BLAST of MELO3C006371 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 241.9 bits (616), Expect = 7.1e-64
Identity = 143/276 (51.81%), Postives = 172/276 (62.32%), Query Frame = 0


Query: 53  EAELELGLGLSLGNGVSAGKGKQ---GVWGERGRILTAKDFPSAISPGGSSSSSSSARFS 112
           E+ELELGLGLSLG G +A  GK    G WGERGR+LTAKDFPS                 
Sbjct: 11  ESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV---------------- 70

Query: 113 GRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEKELL 172
                  G KRAA+  SH G S P + SQVVGWPP+ ++R+NSLVN    + A +E+E  
Sbjct: 71  -------GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEE-- 130

Query: 173 SLKNRSNGVSEKIQDGKNTSATDTEKG--PVGFVKVYMDGVLIGRKVDLNAHSCYETLAL 232
                     +K++D +    T    G   VGF+KV MDGV IGRKVDLNAHS YE LA 
Sbjct: 131 -------AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQ 190

Query: 233 MLEDMFFK-SAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWR 292
            LEDMFF+ + G+V       G   Q  K  +LL GSSEFVLTYEDKEGDW+LVGDVPWR
Sbjct: 191 TLEDMFFRTNPGTV-------GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWR 247

Query: 293 MFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI 323
           MF+ SVK+LR+M+TSEA GLA R Q  +ER   +P+
Sbjct: 251 MFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 247

[Close]

BLAST of MELO3C006371 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 222.2 bits (565), Expect = 5.8e-58
Identity = 139/283 (49.12%), Postives = 169/283 (59.72%), Query Frame = 0


Query: 48  SSSPVEAELELGLGLSLGNGVSAGKGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSAR 107
           S+ P E+ELELGLGLSLG          G W ERGRILTAKDFPS               
Sbjct: 12  SNLPAESELELGLGLSLGG---------GAWKERGRILTAKDFPSV-------------- 71

Query: 108 FSGRPVAISGVKRAAEPVSHDGGSSPPAVSQVVGWPPLRAYRINSLVNQ-----AKNQKA 167
                    G KR+AE  SH  G+SPP  SQVVGWPP+  +R+NSLVN      A+ ++ 
Sbjct: 72  ---------GSKRSAESSSHQ-GASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEG 131

Query: 168 GDEKELL---SLKNRSNGVSEKIQDGKNTSATDTEKGPVGFVKVYMDGVLIGRKVDLNAH 227
             EK+++    LK+ S  V+ K+Q              +GFVKV MDGV IGRKVD+ AH
Sbjct: 132 DGEKKVVKNDELKDVSMKVNPKVQG-------------LGFVKVNMDGVGIGRKVDMRAH 191

Query: 228 SCYETLALMLEDMFFKSAGSVPSTGLSGGQDEQAPKLSKLLTGSSEFVLTYEDKEGDWLL 287
           S YE LA  LE+MFF         G++G    +  K  +LL GSS+FVLTYEDKEGDW+L
Sbjct: 192 SSYENLAQTLEEMFF---------GMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWML 239

Query: 288 VGDVPWRMFLGSVKKLRIMRTSEAKGLAPRCQGRSERNGIKPI 323
           VGDVPWRMF+ SVK+LRIM TSEA GLAPR Q + +R    P+
Sbjct: 252 VGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239

[Close]

BLAST of MELO3C006371 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 179.5 bits (454), Expect = 4.3e-45
Identity = 132/298 (44.30%), Postives = 167/298 (56.04%), Query Frame = 0


Query: 12  GIASAGGSSGASNDENSVSKAKELNTHQADLSSEEFSSSPVEAELELGLGLSLGNGVSAG 71
           G +++G +S  SNDEN V   ++             SSSP+  ELELGL LSLG      
Sbjct: 3   GGSASGSASALSNDENLVVSCED-------------SSSPIGNELELGLTLSLGRK---- 62

Query: 72  KGKQGVWGERGRILTAKDFPSAISPGGSSSSSSSARFSGRPVAISGVKRAAEPVSHDGGS 131
                  G R   + A D         SSSSSSS+  S R   I+G+KR A+ ++   G 
Sbjct: 63  -------GYRDCRVYADD---------SSSSSSSSSLS-RASVIAGIKRTADSMAATSG- 122

Query: 132 SPPAVSQVVGWPPLRAYRINSLVNQAKNQKAGDEK-ELLSLKNRSNGVSEKIQDGKNTSA 191
                 QVVGWPP+R YR+NS+VNQAK     D   E+    N++   S K+++      
Sbjct: 123 ------QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSM---- 182

Query: 192 TDTEKGPVGFVKVYMDGVLIGRKVDLNAHSCYETLALMLEDMFFK-SAGSVPSTGLSGGQ 251
                    FVKV MDG+ IGRK+DLNAH CYE+L+  LE+MF K   GS   T  + G 
Sbjct: 183 ---------FVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGS--RTLETDGH 242

Query: 252 DEQAPKLSKLLTGSSEFVLTYEDKEGDWLLVGDVPWRMFLGSVKKLRIMRTSEAKGLA 308
            E   K+  L  GSS  VLTYEDKEGDW+LVGDVPW MF+GSV++LRIM+TSEA G A
Sbjct: 243 METPVKI--LPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242

The following BLAST results are available for this feature:

BLAST of MELO3C006371 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438451.1	2.1e-174	100.00	PREDICTED: auxin-responsive protein IAA13 isoform X1 [Cucumis melo]	[more]
XP_004134035.1	3.8e-168	96.58	auxin-responsive protein IAA13 isoform X2 [Cucumis sativus]	[more]
XP_008438452.1	2.5e-164	100.00	PREDICTED: auxin-responsive protein IAA13 isoform X2 [Cucumis melo]	[more]
TYK17353.1	2.5e-164	100.00	DNA mismatch repair protein MSH1 [Cucumis melo var. makuwa]	[more]
KAA0049205.1	2.5e-164	100.00	DNA mismatch repair protein MSH1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C006371 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38831	1.0e-62	51.81	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	8.2e-57	49.12	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
Q38829	6.1e-44	44.30	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q0DWF2	8.8e-43	44.64	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]
A2XB18	4.4e-42	42.76	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]

BLAST of MELO3C006371 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AW30	1.0e-174	100.00	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483540 PE=3 SV=1	[more]
A0A0A0L9M5	1.8e-168	96.58	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G134550 PE=3 SV=1	[more]
A0A5D3CZM2	1.2e-164	100.00	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7U6B6	1.2e-164	100.00	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3AWI1	1.2e-164	100.00	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483540 PE=3 SV=1	[more]

BLAST of MELO3C006371 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33310.1	4.2e-64	52.54	auxin-induced protein 13	[more]
AT2G33310.3	4.2e-64	52.54	auxin-induced protein 13	[more]
AT2G33310.2	7.1e-64	51.81	auxin-induced protein 13	[more]
AT1G04550.2	5.8e-58	49.12	AUX/IAA transcriptional regulator family protein	[more]
AT4G28640.1	4.3e-45	44.30	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..174
None	No IPR available	GENE3D	3.10.20.90		coord: 194..311 e-value: 5.7E-36 score: 124.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..49
None	No IPR available	PANTHER	PTHR31734:SF187	AUXIN-RESPONSIVE PROTEIN	coord: 40..313
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 192..298
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 114..309 e-value: 3.5E-59 score: 200.6
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 40..313
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 198..302 score: 24.537094

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006371.1	MELO3C006371.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding