MELO3C006209.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C006209.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionchromo domain protein LHP1-like
Locationchr06: 2208369 .. 2210799 (-)
RNA-Seq ExpressionMELO3C006209.jh1
SyntenyMELO3C006209.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGAAAAATGGGGAGAGGGAAGAAGAAAGCGGCGGGAAGTTCTGAACCCGAAACAGTGGCGCTTCCAAGCCCCGATTTCACTCAATCAACTCATCTTAATGGCGATTCAGCCCCTTCAATCTCTAACAACAATGGCAGTGAACTCAAAATTTCATTTCCACATCCACCTTCTTCACTTCACAATGCTTCTGTGCAAATTCCACTACCCACCGACGACGCCGGAGTGGTCAACGGCGAAGACAATGCCGTACCTGATGTTTCTGCTTCTGAACGTACTAACCTAGATGAAGGCTTCTTCGAAGTTGAAGCTATTCGGCGGAAAAGAGTTCGTAAGGTATTTCGGTCTCTTCCGCCATTGTATCTACTTGTTCTAGGATAATGTTACGTTTTTAGATATATCATGATTCCATTTGTAAACAGAATTTGGTAGACAACTGTGGATAAAAAATCAGCGCCTGAAAGTTGGTTAGGTATTTCGGTCTCTCTATCCGTAAGCTGTGGATATTATGTTAAGTTTGTAATATGGTTATGTTTTAGGAATTGGTTAGCTATTTTGGTCACTCTATTCGTAAAATTATGGAATGTGAATGTACTTGCGAAATTGTAGATGTTTATGAGAGTGTGTTTATTTGTGTATTTCCCTTCTATTTCGATTTACTGTGGAAATAGCTTTTGATTCCGTTGTTTTGTTATGGAATTAGTTTGGCGTTTTACTCTCGGATTTGTTGTTTTGGCGATTTTGTCTCTGGATTTTCTTTGATGAGTCTGATTTGAGTTTTTTTTTTTTCGGATTCATAGGGACAGCTTCAATACCTCGTCAAATGGTGTGTACGATTTTGAGGTTTTTCTGTTTGTTAATTGTACAGTTCTTTCAGCTATCGATGTGATTTGTTCTTGATATACGTGAAAGTAGCTTCAGGAATTTGTTTTTGACAGGCGTGGTTGGCCAGAGACAGAAAATACGTGGGAACCCTTGGACAATCTCCAATCATGCTTTGAATTTATTGAAGAATATGAAGAAAGGTTCTTGGACCTATTCAATTATTTTTTATTTTGTGAAATGATTGCAGCAAACTTATGGCGAATGGAATTGTAATTTAGAAAATTTCCTCACAATTCGGGACTGATACTGTGTTGTTCAGGTTTTGTCACTCGCGATCGGGAAAGCAGCGGAAGCGGAAGCGCAAGGATGGAGACGTTGAAAGTGAATCTCAAGAGGAAAAAGATCTCCAAATTATAGCTATTGATAATGTGACGGATGTAGTTATCAATACTCTGGATGATCGTCTATCTGCCGCTCCATTGAACAAGAAACTTCATCGTGATCTTCCTATTCCTCAAGAACCGTTAGACTCTATTCATGAAGGAGAGTTGGATGAGAAATTTGATGGAAGTAGAAAGAGAGACGAATATGATGTGAAACTTATCGACTTCAATGCATCGATGTCTGGGAATATGGTTGATTCTGATAAAAAAACAGTGGCTTCTAACGATGTTAGCCTTGTTTACGATGTTTCCAAGGCCGATTGCGTGGTGGGTTCTGCTCAGGGAAGTCACTCCACTGGAGCCAAGAGAAGGAAGTCCAGTAGGGTGAAAAGGTTCACGAAGGATTCAGCCTTGTCAGAACAAGGATTAAAACAAAATGCAGCAACTGTAGGCATTGAGCCTACTGATCCAAGCGAACAATTAGGACCCCAGAATCCTAGTTCGTCAGGCCACTCCAGAAATGTGTCTACCATCACAAGGATTATCAGGCCTGTTGGTTATTCAGTTTCAGTATTAAATAACATCCCAGATGTAATCGTAACCTTCTTGGCTGTGAGGTTTGTTATGCAACAGTAACTACTCTTCCTTTGCTTGTTGAGTATTATTCTATCTGAAGCAGTGATTGTGGATCTCATTTTTTTGCATGCAGGTCGGATGGAAAAGAAGTGACGGTGAATAACAAATTTCTTAAAGCTAACAATCCACATCTGGTAATTGATCAAATTTCCGTACTTTACCTTGCATATTTTTCTTCAATCGGTATTTGACTTGCTAGTATTTACAACTACTCTCTCACTGCAGTTGATTAACTACTATGAGCAACATCTCCGATATAATCCTACATTATGAAAGAACTGCACTTGTGTCTGGCCACCACCATCATCTTCGTGGTTTACAAGCTGTAATTTTGTAGTTTTAGGAGATTCAGTGAAATACATTATGAATTCTCGGTAAATTTTCAACTGTCAAGAGGAGATCAGACTATTTTCCGTCTCCGTTTAATTCTAATATGGGGATGAATGGAAAGTTATATTCTTTTTGAATATTGAAGTTCCTATCTTAAACAATTTAAAGACTTGGTGAATCGAACTATGAACTTGTAACCCCCCTAACAAAAAAAAAACAAAAAAAAATCTCCAAGGGCAAGAGGCTGTTTGCTCATAA

mRNA sequence

AACGAAAAATGGGGAGAGGGAAGAAGAAAGCGGCGGGAAGTTCTGAACCCGAAACAGTGGCGCTTCCAAGCCCCGATTTCACTCAATCAACTCATCTTAATGGCGATTCAGCCCCTTCAATCTCTAACAACAATGGCAGTGAACTCAAAATTTCATTTCCACATCCACCTTCTTCACTTCACAATGCTTCTGTGCAAATTCCACTACCCACCGACGACGCCGGAGTGGTCAACGGCGAAGACAATGCCGTACCTGATGTTTCTGCTTCTGAACGTACTAACCTAGATGAAGGCTTCTTCGAAGTTGAAGCTATTCGGCGGAAAAGAGTTCGTAAGGGACAGCTTCAATACCTCGTCAAATGGCGTGGTTGGCCAGAGACAGAAAATACGTGGGAACCCTTGGACAATCTCCAATCATGCTTTGAATTTATTGAAGAATATGAAGAAAGGTTTTGTCACTCGCGATCGGGAAAGCAGCGGAAGCGGAAGCGCAAGGATGGAGACGTTGAAAGTGAATCTCAAGAGGAAAAAGATCTCCAAATTATAGCTATTGATAATGTGACGGATGTAGTTATCAATACTCTGGATGATCGTCTATCTGCCGCTCCATTGAACAAGAAACTTCATCGTGATCTTCCTATTCCTCAAGAACCGTTAGACTCTATTCATGAAGGAGAGTTGGATGAGAAATTTGATGGAAGTAGAAAGAGAGACGAATATGATGTGAAACTTATCGACTTCAATGCATCGATGTCTGGGAATATGGTTGATTCTGATAAAAAAACAGTGGCTTCTAACGATGTTAGCCTTGTTTACGATGTTTCCAAGGCCGATTGCGTGGTGGGTTCTGCTCAGGGAAGTCACTCCACTGGAGCCAAGAGAAGGAAGTCCAGTAGGGTGAAAAGGTTCACGAAGGATTCAGCCTTGTCAGAACAAGGATTAAAACAAAATGCAGCAACTGTAGGCATTGAGCCTACTGATCCAAGCGAACAATTAGGACCCCAGAATCCTAGTTCGTCAGGCCACTCCAGAAATGTGTCTACCATCACAAGGATTATCAGGCCTGTTGGTTATTCAGTTTCAGTATTAAATAACATCCCAGATGTAATCGTAACCTTCTTGGCTGTGAGGTCGGATGGAAAAGAAGTGACGGTGAATAACAAATTTCTTAAAGCTAACAATCCACATCTGTTGATTAACTACTATGAGCAACATCTCCGATATAATCCTACATTATGAAAGAACTGCACTTGTGTCTGGCCACCACCATCATCTTCGTGGTTTACAAGCTGTAATTTTGTAGTTTTAGGAGATTCAGTGAAATACATTATGAATTCTCGGTAAATTTTCAACTGTCAAGAGGAGATCAGACTATTTTCCGTCTCCGTTTAATTCTAATATGGGGATGAATGGAAAGTTATATTCTTTTTGAATATTGAAGTTCCTATCTTAAACAATTTAAAGACTTGGTGAATCGAACTATGAACTTGTAACCCCCCTAACAAAAAAAAAACAAAAAAAAATCTCCAAGGGCAAGAGGCTGTTTGCTCATAA

Coding sequence (CDS)

ATGGGGAGAGGGAAGAAGAAAGCGGCGGGAAGTTCTGAACCCGAAACAGTGGCGCTTCCAAGCCCCGATTTCACTCAATCAACTCATCTTAATGGCGATTCAGCCCCTTCAATCTCTAACAACAATGGCAGTGAACTCAAAATTTCATTTCCACATCCACCTTCTTCACTTCACAATGCTTCTGTGCAAATTCCACTACCCACCGACGACGCCGGAGTGGTCAACGGCGAAGACAATGCCGTACCTGATGTTTCTGCTTCTGAACGTACTAACCTAGATGAAGGCTTCTTCGAAGTTGAAGCTATTCGGCGGAAAAGAGTTCGTAAGGGACAGCTTCAATACCTCGTCAAATGGCGTGGTTGGCCAGAGACAGAAAATACGTGGGAACCCTTGGACAATCTCCAATCATGCTTTGAATTTATTGAAGAATATGAAGAAAGGTTTTGTCACTCGCGATCGGGAAAGCAGCGGAAGCGGAAGCGCAAGGATGGAGACGTTGAAAGTGAATCTCAAGAGGAAAAAGATCTCCAAATTATAGCTATTGATAATGTGACGGATGTAGTTATCAATACTCTGGATGATCGTCTATCTGCCGCTCCATTGAACAAGAAACTTCATCGTGATCTTCCTATTCCTCAAGAACCGTTAGACTCTATTCATGAAGGAGAGTTGGATGAGAAATTTGATGGAAGTAGAAAGAGAGACGAATATGATGTGAAACTTATCGACTTCAATGCATCGATGTCTGGGAATATGGTTGATTCTGATAAAAAAACAGTGGCTTCTAACGATGTTAGCCTTGTTTACGATGTTTCCAAGGCCGATTGCGTGGTGGGTTCTGCTCAGGGAAGTCACTCCACTGGAGCCAAGAGAAGGAAGTCCAGTAGGGTGAAAAGGTTCACGAAGGATTCAGCCTTGTCAGAACAAGGATTAAAACAAAATGCAGCAACTGTAGGCATTGAGCCTACTGATCCAAGCGAACAATTAGGACCCCAGAATCCTAGTTCGTCAGGCCACTCCAGAAATGTGTCTACCATCACAAGGATTATCAGGCCTGTTGGTTATTCAGTTTCAGTATTAAATAACATCCCAGATGTAATCGTAACCTTCTTGGCTGTGAGGTCGGATGGAAAAGAAGTGACGGTGAATAACAAATTTCTTAAAGCTAACAATCCACATCTGTTGATTAACTACTATGAGCAACATCTCCGATATAATCCTACATTATGA

Protein sequence

MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRGWPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIAIDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVKLIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRFTKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVLNNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL
Homology
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BLAST of MELO3C006209.jh1 vs. NCBI nr
Match: XP_008438194.2 (PREDICTED: chromo domain protein LHP1-like [Cucumis melo])

HSP 1 Score: 790 bits (2039), Expect = 1.89e-287
Identity = 406/409 (99.27%), Postives = 407/409 (99.51%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKI FPHPPSSLHNA
Sbjct: 16  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNA 75

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 76  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 135

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGD+ESESQEEKDLQIIA
Sbjct: 136 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDIESESQEEKDLQIIA 195

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK
Sbjct: 196 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 255

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF
Sbjct: 256 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 315

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 316 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 375

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409
           NNIPDVIVTFL VRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL
Sbjct: 376 NNIPDVIVTFLVVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 424

[Close]
BLAST of MELO3C006209.jh1 vs. NCBI nr
Match: TYK17507.1 (chromo domain protein LHP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 763 bits (1971), Expect = 2.81e-275
Identity = 394/395 (99.75%), Postives = 395/395 (100.00%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA
Sbjct: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA
Sbjct: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK
Sbjct: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF
Sbjct: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLL 395
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHL+
Sbjct: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLI 395

[Close]
BLAST of MELO3C006209.jh1 vs. NCBI nr
Match: XP_011650798.1 (chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus])

HSP 1 Score: 748 bits (1930), Expect = 4.38e-271
Identity = 387/409 (94.62%), Postives = 394/409 (96.33%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALP PDFTQSTHLNGDSAPSISNNNGSE KI FPH PSSLHNA
Sbjct: 1   MGRGKKKAAGSSEPETVALPIPDFTQSTHLNGDSAPSISNNNGSEPKILFPHSPSSLHNA 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLP DDAGVVNGEDN +PDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 61  SVQIPLPIDDAGVVNGEDNVIPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFC SRSGKQRKRKRKD D+ESESQEEKDLQIIA
Sbjct: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCQSRSGKQRKRKRKDEDIESESQEEKDLQIIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVI+TLDDRLSAAP NKKLHRDLPI QEPLDSIHEGELD KFDGSRK+DEYD+K
Sbjct: 181 IDNVTDVVISTLDDRLSAAPFNKKLHRDLPISQEPLDSIHEGELDGKFDGSRKKDEYDLK 240

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNAS+SGNMVDS+KKTVASNDVSLVYDVSKADCVVGSAQ SHSTGAKRRKSSRVKRF
Sbjct: 241 LIDFNASISGNMVDSEKKTVASNDVSLVYDVSKADCVVGSAQVSHSTGAKRRKSSRVKRF 300

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSAL EQGLKQNAATV IEP DPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 301 TKDSALPEQGLKQNAATVSIEPIDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL
Sbjct: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409

[Close]
BLAST of MELO3C006209.jh1 vs. NCBI nr
Match: KAA0049056.1 (chromo domain protein LHP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 740 bits (1910), Expect = 5.22e-266
Identity = 386/395 (97.72%), Postives = 390/395 (98.73%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA
Sbjct: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRK Q +++   RG
Sbjct: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKLQ-EFVFDRRG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA
Sbjct: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK
Sbjct: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF
Sbjct: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLL 395
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHL+
Sbjct: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLI 394

[Close]
BLAST of MELO3C006209.jh1 vs. NCBI nr
Match: KGN56653.2 (hypothetical protein Csa_009693 [Cucumis sativus])

HSP 1 Score: 748 bits (1930), Expect = 1.34e-263
Identity = 387/409 (94.62%), Postives = 394/409 (96.33%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALP PDFTQSTHLNGDSAPSISNNNGSE KI FPH PSSLHNA
Sbjct: 487 MGRGKKKAAGSSEPETVALPIPDFTQSTHLNGDSAPSISNNNGSEPKILFPHSPSSLHNA 546

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLP DDAGVVNGEDN +PDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 547 SVQIPLPIDDAGVVNGEDNVIPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 606

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFC SRSGKQRKRKRKD D+ESESQEEKDLQIIA
Sbjct: 607 WPETENTWEPLDNLQSCFEFIEEYEERFCQSRSGKQRKRKRKDEDIESESQEEKDLQIIA 666

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVI+TLDDRLSAAP NKKLHRDLPI QEPLDSIHEGELD KFDGSRK+DEYD+K
Sbjct: 667 IDNVTDVVISTLDDRLSAAPFNKKLHRDLPISQEPLDSIHEGELDGKFDGSRKKDEYDLK 726

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNAS+SGNMVDS+KKTVASNDVSLVYDVSKADCVVGSAQ SHSTGAKRRKSSRVKRF
Sbjct: 727 LIDFNASISGNMVDSEKKTVASNDVSLVYDVSKADCVVGSAQVSHSTGAKRRKSSRVKRF 786

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSAL EQGLKQNAATV IEP DPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 787 TKDSALPEQGLKQNAATVSIEPIDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 846

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL
Sbjct: 847 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 895

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy Swiss-Prot
Match: Q946J8 (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-42
Identity = 133/383 (34.73%), Postives = 198/383 (51.70%), Query Frame = 0 

Query: 69  DDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRGWPETENTW 128
           +D G    ++    +    ER  LDEGF+E+EAIRRKRVRKG++QYL+KWRGWPET NTW
Sbjct: 80  EDDGGDEEDEEGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTW 139

Query: 129 EPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIAIDNVTDVV 188
           EPL+NLQS  + I+ +E      + G  RKRKRK     S+ ++++ L        T   
Sbjct: 140 EPLENLQSIADVIDAFEGSLKPGKPG--RKRKRKYAGPHSQMKKKQRL--------TSTS 199

Query: 189 INTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVKLIDFNASM 248
            +  +   S+  LN     D+P   +PLD      L+   +    ++ Y    ++ N+  
Sbjct: 200 HDATEKSDSSTSLNNSSLPDIP---DPLDLSGSSLLNRDVEA---KNAYVSNQVEANSGS 259

Query: 249 SG-----NMVDSDKK-TVASNDV-SLVYDVSKADCVVGSAQGSHS--------------- 308
            G      ++D++K+     N++   V + + A C  G   GS                 
Sbjct: 260 VGMARQVRLIDNEKEYDPTLNELRGPVNNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKE 319

Query: 309 -------TGAKRRKSSRVKRFTKDSALS-------EQGLKQNAATVGIEPTDPSEQLGPQ 368
                   GAKRRKS  VKRF +D + S       +Q L  +  T  ++      ++G +
Sbjct: 320 LDKNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTT--LDSFGRIARMGNE 379

Query: 369 NPS-------SSGHSRNVSTITRIIRPVGYSVSVLNNIPDVIVTFLAVRSDGKEVTVNNK 409
            P        S         IT+I++P+ ++ SV +N+ +V+VTFLA+RSDGKE  V+N+
Sbjct: 380 YPGVMENCNLSQKTKIEELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNR 439

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy Swiss-Prot
Match: Q944N1 (Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 2.8e-41
Identity = 127/347 (36.60%), Postives = 194/347 (55.91%), Query Frame = 0 

Query: 73  VVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRGWPETENTWEPLD 132
           VV  E      V+   +  L EGF+E+E +RR+R  KG++ YL+KWRGWPE+ NTWEP  
Sbjct: 69  VVRVEKGDGDGVAKKVKPKLAEGFYEIETVRRRRTVKGKVYYLIKWRGWPESANTWEPET 128

Query: 133 NLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESE---SQEEKDLQIIAIDNVTDVVI 192
           NL SC + I+ YEE     +SGK R+RKRK G  ++     Q+ +    +A  N   V +
Sbjct: 129 NLSSCTDIIDAYEESL---KSGKLRRRKRKFGATQTHPMIKQQRRFSAPVATYNGPAVKV 188

Query: 193 NTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGS----RKRDEYDVKLIDFN 252
             +++   + PLN     DL    +   S    ++DE  +G+    R+++E ++KL +  
Sbjct: 189 RIIEEPTPSPPLNVLKATDL---VDSNGSELNSKVDEVVNGNGLRLREQNELNLKLSELK 248

Query: 253 --ASMSGNMVDSDKKTVASNDVSLVY-DVSKADCVVGSAQGSHSTGAKRRKSSRVKRFTK 312
              S +GN VD     ++ N ++  +  V+ A+      Q    TGAK+RKS  V+RF +
Sbjct: 249 GATSTNGNPVD-----ISGNGLTNGFPKVNGAEFY----QSDRCTGAKKRKSGCVRRFKR 308

Query: 313 DSALSEQGLKQNAATVGIEPTDPSEQLGPQN-PSSSGHSRNVSTITRIIRPVGYSVSVLN 372
           ++  + +   Q+A   G  P     Q G  N    +  S++  TIT+++ PV Y  S  N
Sbjct: 309 ETTSAVKDDTQDALAGG--PLATFMQDGSHNHVMVADDSKDGYTITQLVNPVSYKASFSN 368

Query: 373 NIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPT 409
           ++ DV VTF+A R+DG  V V+NKFLK NNP LLIN+YE+++RY+PT
Sbjct: 369 DMLDVSVTFVAKRADGNLVLVDNKFLKMNNPLLLINFYEENMRYHPT 398

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy Swiss-Prot
Match: Q339W7 (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica OX=39947 GN=LHP1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.9e-38
Identity = 129/369 (34.96%), Postives = 181/369 (49.05%), Query Frame = 0 

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           S Q     +D+ +V  E  A   V       L EG++E+E IRR+R+RKG+LQYLVKWRG
Sbjct: 71  SEQAAAEEEDSPLVVVEAEAAAPVVDGSPPKLAEGYYEIEDIRRRRLRKGKLQYLVKWRG 130

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPE+ NTWEPL+NL +C + I+ +E R    R G++RKRK     V              
Sbjct: 131 WPESANTWEPLENLSACSDIIDAFEMRLQSPRPGRKRKRKITTTPVAGS----------- 190

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEP-------------LDSIHEGELDEK 240
                    N    +     L+ K H   P P+                 S     LD  
Sbjct: 191 ---------NPSHGKRGRPRLDAKSHTRAPAPEPKQLPCRTSCRRATNCSSKTVAGLDA- 250

Query: 241 FDGSRKRDEYDVKLIDFNASM------SGNMVDSDKKTVASNDVSLVYDVSKADCV--VG 300
             GS  R++    ++   +S          +  S + T   N+  LV   S ++ +  V 
Sbjct: 251 -SGSVVRNQLAQNIVQEGSSSVISRTPCQELPLSIRLTDQQNEHHLVNGSSNSENLVKVP 310

Query: 301 SAQGSHSTGAKRRKSSRVKRFTKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGH 360
            +QG   TGAK+RKS  V+RF ++     QG  +  A V  E    +E        + G 
Sbjct: 311 PSQGGQVTGAKKRKSGNVRRFEQNKPTQGQG--ECGALVVAEDVGSTEGETGDKKKTEGC 370

Query: 361 SRNVSTITRIIRPVGYSVSVLNNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYY 409
              V  IT+II+PV ++ +V N++  V +TF A+RSDG+EV V++K LKANNP LLI+YY
Sbjct: 371 PNRVH-ITKIIKPVRFAAAVNNDVQQVSITFKALRSDGQEVMVDDKELKANNPLLLISYY 414

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy Swiss-Prot
Match: O95931 (Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.2e-09
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 88  ERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRGWPETENTWEPLDNLQSCFEFIEEYEER 147
           E + + E  F VE+IR+KRVRKG+++YLVKW+GWP   +TWEP +++      +  YEE+
Sbjct: 2   ELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDP-RLVMAYEEK 61

Query: 148 FCHSRSGKQRKRKRK 163
               R+   RKR  K
Sbjct: 62  EERDRASGYRKRGPK 75

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy Swiss-Prot
Match: Q8VDS3 (Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.2e-09
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 88  ERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRGWPETENTWEPLDNLQSCFEFIEEYEER 147
           E + + E  F VE+IR+KRVRKG+++YLVKW+GWP   +TWEP +++      +  YEE+
Sbjct: 2   ELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDP-RLVMAYEEK 61

Query: 148 FCHSRSGKQRKRKRK 163
               R+   RKR  K
Sbjct: 62  EERDRASGYRKRGPK 75

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AVS6 (chromo domain protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC103483372 PE=4 SV=1)

HSP 1 Score: 790 bits (2039), Expect = 9.15e-288
Identity = 406/409 (99.27%), Postives = 407/409 (99.51%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKI FPHPPSSLHNA
Sbjct: 16  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNA 75

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 76  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 135

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGD+ESESQEEKDLQIIA
Sbjct: 136 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDIESESQEEKDLQIIA 195

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK
Sbjct: 196 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 255

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF
Sbjct: 256 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 315

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 316 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 375

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409
           NNIPDVIVTFL VRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL
Sbjct: 376 NNIPDVIVTFLVVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 424

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D0R0 (Chromo domain protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003740 PE=4 SV=1)

HSP 1 Score: 763 bits (1971), Expect = 1.36e-275
Identity = 394/395 (99.75%), Postives = 395/395 (100.00%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA
Sbjct: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA
Sbjct: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK
Sbjct: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF
Sbjct: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLL 395
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHL+
Sbjct: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLI 395

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L6G7 (Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126820 PE=4 SV=1)

HSP 1 Score: 748 bits (1930), Expect = 2.12e-271
Identity = 387/409 (94.62%), Postives = 394/409 (96.33%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALP PDFTQSTHLNGDSAPSISNNNGSE KI FPH PSSLHNA
Sbjct: 1   MGRGKKKAAGSSEPETVALPIPDFTQSTHLNGDSAPSISNNNGSEPKILFPHSPSSLHNA 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLP DDAGVVNGEDN +PDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG
Sbjct: 61  SVQIPLPIDDAGVVNGEDNVIPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFC SRSGKQRKRKRKD D+ESESQEEKDLQIIA
Sbjct: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCQSRSGKQRKRKRKDEDIESESQEEKDLQIIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVI+TLDDRLSAAP NKKLHRDLPI QEPLDSIHEGELD KFDGSRK+DEYD+K
Sbjct: 181 IDNVTDVVISTLDDRLSAAPFNKKLHRDLPISQEPLDSIHEGELDGKFDGSRKKDEYDLK 240

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNAS+SGNMVDS+KKTVASNDVSLVYDVSKADCVVGSAQ SHSTGAKRRKSSRVKRF
Sbjct: 241 LIDFNASISGNMVDSEKKTVASNDVSLVYDVSKADCVVGSAQVSHSTGAKRRKSSRVKRF 300

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSAL EQGLKQNAATV IEP DPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 301 TKDSALPEQGLKQNAATVSIEPIDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL
Sbjct: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U472 (Chromo domain protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002840 PE=4 SV=1)

HSP 1 Score: 740 bits (1910), Expect = 2.53e-266
Identity = 386/395 (97.72%), Postives = 390/395 (98.73%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA
Sbjct: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRK Q +++   RG
Sbjct: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKLQ-EFVFDRRG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA
Sbjct: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240
           IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK
Sbjct: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVK 240

Query: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300
           LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF
Sbjct: 241 LIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSSRVKRF 300

Query: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360
           TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL
Sbjct: 301 TKDSALSEQGLKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRPVGYSVSVL 360

Query: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLL 395
           NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHL+
Sbjct: 361 NNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLI 394

[Close]
BLAST of MELO3C006209.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GGE8 (chromo domain-containing protein LHP1-like OS=Cucurbita moschata OX=3662 GN=LOC111453676 PE=4 SV=1)

HSP 1 Score: 553 bits (1425), Expect = 2.14e-194
Identity = 296/417 (70.98%), Postives = 337/417 (80.82%), Query Frame = 0 

Query: 1   MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKISFPHPPSSLHNA 60
           MGRGKKKA GSSE E +ALP P FT ST +NGDSAPS SNNNG+ELKIS   P SS+ N+
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELKISSRFPASSIQNS 60

Query: 61  SVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRG 120
           SVQ PL   + G V+GE+NAV DV+ASE T LD+GFF VEAIRRKRVRKGQLQYLVKW G
Sbjct: 61  SVQTPLLAGEGGEVHGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETENTWEPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIA 180
           WPET NTWEP DNLQSC EFIEE+E+R   SRSGKQRKRKRKDGD  ++ QEEK  ++IA
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 IDNVTDVVINTLDDRLSAAPLNKKLHRDLPIPQEPLDS-----IHEGELDEKFDGSRKRD 240
            DNVT+V ++T+DD LSA PLN  +H DLP PQ  +DS     +  G++ EKFDGSR+RD
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMGEKFDGSRRRD 240

Query: 241 EYDVKLIDFNASMSGNMVDSDKKTVASNDVSLVYDVSKADCVVGSAQGSHSTGAKRRKSS 300
           EYD+KLI+  A++S NMVDSDKK  +S D+ LVYD SKADC VGS QGSHS GAKRRKSS
Sbjct: 241 EYDLKLIELKAAISANMVDSDKKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDSALSEQG---LKQNAATVGIEPTDPSEQLGPQNPSSSGHSRNVSTITRIIRP 360
           RVKRFTK++  SE     LKQN   V +EPTD +EQLGP+NPS SGHSRNV+TI RII+P
Sbjct: 301 RVKRFTKEAVSSENSDHRLKQNGIAVNMEPTDQNEQLGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVLNNIPDVIVTFLAVRSDGKEVTVNNKFLKANNPHLLINYYEQHLRYNPTL 409
           VGYSVSV NNIPDV+VTFLAVRSDGKEVTVNNKFLKANNP LLIN+YEQHLRYNPTL
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPTL 417

[Close]
BLAST of MELO3C006209.jh1 vs. TAIR 10
Match: AT5G17690.1 (like heterochromatin protein (LHP1) )

HSP 1 Score: 175.3 bits (443), Expect = 1.0e-43
Identity = 133/383 (34.73%), Postives = 198/383 (51.70%), Query Frame = 0 

Query: 69  DDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKGQLQYLVKWRGWPETENTW 128
           +D G    ++    +    ER  LDEGF+E+EAIRRKRVRKG++QYL+KWRGWPET NTW
Sbjct: 80  EDDGGDEEDEEGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTW 139

Query: 129 EPLDNLQSCFEFIEEYEERFCHSRSGKQRKRKRKDGDVESESQEEKDLQIIAIDNVTDVV 188
           EPL+NLQS  + I+ +E      + G  RKRKRK     S+ ++++ L        T   
Sbjct: 140 EPLENLQSIADVIDAFEGSLKPGKPG--RKRKRKYAGPHSQMKKKQRL--------TSTS 199

Query: 189 INTLDDRLSAAPLNKKLHRDLPIPQEPLDSIHEGELDEKFDGSRKRDEYDVKLIDFNASM 248
            +  +   S+  LN     D+P   +PLD      L+   +    ++ Y    ++ N+  
Sbjct: 200 HDATEKSDSSTSLNNSSLPDIP---DPLDLSGSSLLNRDVEA---KNAYVSNQVEANSGS 259

Query: 249 SG-----NMVDSDKK-TVASNDV-SLVYDVSKADCVVGSAQGSHS--------------- 308
            G      ++D++K+     N++   V + + A C  G   GS                 
Sbjct: 260 VGMARQVRLIDNEKEYDPTLNELRGPVNNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKE 319

Query: 309 -------TGAKRRKSSRVKRFTKDSALS-------EQGLKQNAATVGIEPTDPSEQLGPQ 368
                   GAKRRKS  VKRF +D + S       +Q L  +  T  ++      ++G +
Sbjct: 320 LDKNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTT--LDSFGRIARMGNE 379

Query: 369 NPS-------SSGHSRNVSTITRIIRPVGYSVSVLNNIPDVIVTFLAVRSDGKEVTVNNK 409
            P        S         IT+I++P+ ++ SV +N+ +V+VTFLA+RSDGKE  V+N+
Sbjct: 380 YPGVMENCNLSQKTKIEELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNR 439

The following BLAST results are available for this feature:
BLAST of MELO3C006209.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438194.21.89e-28799.27PREDICTED: chromo domain protein LHP1-like [Cucumis melo][more]
TYK17507.12.81e-27599.75chromo domain protein LHP1-like [Cucumis melo var. makuwa][more]
XP_011650798.14.38e-27194.62chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus][more]
KAA0049056.15.22e-26697.72chromo domain protein LHP1-like [Cucumis melo var. makuwa][more]
KGN56653.21.34e-26394.62hypothetical protein Csa_009693 [Cucumis sativus][more]
BLAST of MELO3C006209.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q946J81.5e-4234.73Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE... [more]
Q944N12.8e-4136.60Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2[more]
Q339W72.9e-3834.96Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica O... [more]
O959316.2e-0944.00Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1[more]
Q8VDS36.2e-0944.00Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1[more]
BLAST of MELO3C006209.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AVS69.15e-28899.27chromo domain protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC103483372 PE=4 SV=... [more]
A0A5D3D0R01.36e-27599.75Chromo domain protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A0A0L6G72.12e-27194.62Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126820 PE=4... [more]
A0A5A7U4722.53e-26697.72Chromo domain protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A6J1GGE82.14e-19470.98chromo domain-containing protein LHP1-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of MELO3C006209.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17690.11.0e-4334.73like heterochromatin protein (LHP1) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008251Chromo shadow domainSMARTSM00300ChS_2coord: 332..407
e-value: 2.1E-4
score: 28.9
IPR023780Chromo domainPFAMPF00385Chromocoord: 118..146
e-value: 4.3E-6
score: 26.6
NoneNo IPR availableGENE3D2.40.50.40coord: 75..151
e-value: 1.0E-10
score: 43.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..342
NoneNo IPR availablePANTHERPTHR47240:SF2CHROMO DOMAIN-CONTAINING PROTEIN LHP1coord: 75..407
NoneNo IPR availableCDDcd18982CSDcoord: 353..402
e-value: 1.2824E-24
score: 93.3782
NoneNo IPR availableCDDcd00024CD_CSDcoord: 118..145
e-value: 9.75079E-9
score: 49.0125
IPR044251Chromo domain-containing protein LHP1PANTHERPTHR47240CHROMO DOMAIN-CONTAINING PROTEIN LHP1coord: 75..407
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 97..155
score: 10.168301
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 92..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006209.jh1.t1MELO3C006209.jh1.t1mRNA
MELO3C006209.jh1.t3MELO3C006209.jh1.t3mRNA
MELO3C006209.jh1.t2MELO3C006209.jh1.t2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
cellular_component GO:0005634 nucleus