MELO3C006108 (gene) Melon (DHL92) v4

Overview


Name	MELO3C006108
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein PAIR1 isoform X1
Location	chr06: 1086525 .. 1088779 (+)
RNA-Seq Expression	MELO3C006108
Synteny	MELO3C006108

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTCCAGGCATGAACCTGTTCTTAATTATTTTTAGCGTTATATTCTGTTTGAATTGCAAGAGTTCATGGAGAACAATGCGCAAAGAAGTTTAGGTTGCAATGCTGTTCATATTCAGTAGCTTGACATTTTCTTAACATAAATGTTTCATGTTGTTTATTGTGTTACTCGTTTTGGAAAATATGGATTTCCTTTTCATCCTAGCTGCGTTTTTGATGATTCGGAAGGAATTTGTTGTCCCCGAGCTGTTAAGAGATTGATATTTTAAATATTTCTTACTGTATAGACTTCGAAACTGATACTTACACGCATCGTAGTTTGATTCGTTCTATGGTTGAATTGACTTTATTTTTAGCAATACATTATTCAGTTACTTTAAGTTTGGATAAAAAGAACAGATGAGTAAGAACATGAAGTTTTCAGACTATAATCTTATCATGAAATTGCAAGCTGAGTTACTTGATCCAATATTTTGAGTATTACGTCATTATTTTCAATTTTGTTCCACGCAAAAATATTCAAGAAAAATACGAAAGTTTCTTCAGTGATGAAAATGTGAATGGTCTTGAAAATCTGTAGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCGTCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGTTCTTGTCTAGACTCTGGATTTAGGACTTTGTTTGTCCATTAAGAAATTAAGGAAATGACACTAAAATGCTCTGGCTCTTTATCATTCCATGCGCATTAGCATTGAAGACAAAACTTGGAAATGGTTATTTTCATTGTTTAGGAATCACTTTTGAATTTTATTTTATTATCTATTTTTTGACGTATAATCTACCAAAAAAAGAAAGAAAAGGAAACTATCTCTTGAGTTCTTAAATCTATTTTTTGTTTTAATCTCCACTTATGAATTAACTTTGATGTACGATTCTTTCTGGCAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGACTCTCAAAATCTTCAACCAGTTTAACACAAAAATGGAGACCTAGTCCTCTTACGGATTCTAAGTGTAAGTTCATTCTTTTGGACTCCTATAGCGGACTCTAACTATTTCAATAAGTTCGGTTGAATCCGTTACAGCATGGTATAACAGTTTGTGTAGGGTAAGTTGATCAACTGCCATTTCTTACAACCTTGATATCTTTTCTGTGACTTAGTTTCATAATTTAGCTTTCTTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGGTGAGTTTTGCAATCCCTCAAGCTGAAAAGTAAAATTGGAAGAGAAACTATGTATTAGTTTTACTGCTTGAAAAACACTTTCTGCATTGAAACCCGATGTGTTTGTTACTGAAGTAGGAATACGGTGATGAATATGCTCTATTTGAATTTCAGTTCCTTCAAAAAGTAGATTAAGATTGCTATGCTATTAATGTGAAAAGGGGAAAGTGCCCAATTCAGTACACAATCCCGACCTCAAATTTAAAGTTTCAAGGCCAAAAGTTTATTCAAATAAAATGCTTATTTATTTTTCAAATTGCAGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTTGCTGCAATCCATGGTAAAATTGTATTAGATCAATGAAATATTTTTTTGATCATTAAGTTTCTTTAATTGTAATCGTAATATCTAAATTGTGCATTCAATTAACGAGTGCAAATTTCAATGTCAGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTGCATGAGATTTCCGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCGTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGTAAGTGCATGTTGTGTCAAATATTTCTATAGCCTATAA

mRNA sequence

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTTAAATGCGTTAACGACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCGTCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGACTCTCAAAATCTTCAACCAGTTTAACACAAAAATGGAGACCTAGTCCTCTTACGGATTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTTGCTGCAATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTGCATGAGATTTCCGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCGTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGTAAGTGCATGTTGTGTCAAATATTTCTATAGCCTATAA

Coding sequence (CDS)

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTTAAATGCGTTAACGACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCGTCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGACTCTCAAAATCTTCAACCAGTTTAACACAAAAATGGAGACCTAGTCCTCTTACGGATTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTTGCTGCAATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTGCATGAGATTTCCGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCGTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGTAAGTGCATGTTGTGTCAAATATTTCTATAGCCTATAA

Protein sequence

MRLKINKACDLSSISVLPPQLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKVSACCVKYFYSL

Homology

[Close]

BLAST of MELO3C006108 vs. NCBI nr
Match: TYK17600.1 (protein PAIR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 249/256 (97.27%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ-LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQN 60
           MRLKINKACDLSSISVLPPQ LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQN
Sbjct: 135 MRLKINKACDLSSISVLPPQRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQN 194

Query: 61  SFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDS 120
           SFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDS
Sbjct: 195 SFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDS 254

Query: 121 KCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSL 180
           KCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSL
Sbjct: 255 KCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSL 314

Query: 181 LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDF 240
           LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDF
Sbjct: 315 LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDF 374

Query: 241 ISTFTKEMKVSACCVK 256
           ISTFTKEMK     +K
Sbjct: 375 ISTFTKEMKAMISTLK 390

[Close]

BLAST of MELO3C006108 vs. NCBI nr
Match: XP_008438047.1 (PREDICTED: protein PAIR1 isoform X2 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 3.4e-127
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK     +K
Sbjct: 241 DFISTFTKEMKAMISTLK 258

[Close]

BLAST of MELO3C006108 vs. NCBI nr
Match: XP_008438046.1 (PREDICTED: protein PAIR1 isoform X1 [Cucumis melo] >XP_016898943.1 PREDICTED: protein PAIR1 isoform X1 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 3.4e-127
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK     +K
Sbjct: 241 DFISTFTKEMKAMISTLK 258

[Close]

BLAST of MELO3C006108 vs. NCBI nr
Match: XP_008438048.1 (PREDICTED: protein PAIR1 isoform X3 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 3.4e-127
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK     +K
Sbjct: 241 DFISTFTKEMKAMISTLK 258

[Close]

BLAST of MELO3C006108 vs. NCBI nr
Match: XP_004134325.2 (putative recombination initiation defects 3 [Cucumis sativus])

HSP 1 Score: 454.1 bits (1167), Expect = 7.9e-124
Identity = 242/258 (93.80%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPP+SYSKED QLG+SKSSTSLTQKWRPSPL 
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPVSYSKEDSQLGISKSSTSLTQKWRPSPLP 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NS
Sbjct: 121 DSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           S LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK   C +K
Sbjct: 241 DFISTFTKEMKAMICTLK 258

[Close]

BLAST of MELO3C006108 vs. ExPASy Swiss-Prot
Match: Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-54
Identity = 117/255 (45.88%), Postives = 177/255 (69.41%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQLNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLS 60
           M++ INKACDL SISV PP L      Q + QLRSQ SQQSFSQG SS     G +SQ++
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRSAEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFSQMT 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPL 120
           Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +ED QL  S+SS+ L+++W  + +
Sbjct: 61  QSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSSASI 120

Query: 121 TDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVN 180
            +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ + 
Sbjct: 121 GESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKLTLQ 180

Query: 181 SSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLK 240
            + LQ + K+  D KA +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++
Sbjct: 181 DTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQKIQ 240

Query: 241 NDFISTFTKEMKVSA 252
            +   TFT+E++V A
Sbjct: 241 REICHTFTREIQVLA 255

[Close]

BLAST of MELO3C006108 vs. ExPASy Swiss-Prot
Match: Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 103/259 (39.77%), Postives = 150/259 (57.92%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQLNALTTGQQ---------APQLRSQP---SQQSFSQGLSS 60
           M+LK+NKACD++SISVLPP+    ++G           A Q RSQP   SQQSFSQG S+
Sbjct: 1   MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60

Query: 61  Q--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFPPLSYS--KEDCQ 120
              H   SQ SQ S D+ +       T +QRF   D  +S K+ S  P  S S  +E+ Q
Sbjct: 61  SLLHSQ-SQFSQVSLDDNLLTLLPSPTRDQRFGLHD--DSSKRMSSLPASSASCAREESQ 120

Query: 121 LGLSKSSTSLTQKWRPSPLTDSKCQV-GEELDRRLGTIENSLNKFGKILDSLLSDILQLN 180
           L L+K  ++   +W PS       QV  E+++R+   + +S++K G ++DS+ SD++QLN
Sbjct: 121 LQLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLN 180

Query: 181 KGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGGFKLISDQLK-KDAYQERLH 235
           + MK+ SLD  SI QK+ V  S LQ + K  DD+KA+     K   DQ    ++   +L+
Sbjct: 181 RAMKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGSKLN 240

[Close]

BLAST of MELO3C006108 vs. ExPASy TrEMBL
Match: A0A5D3D1V5 (Protein PAIR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004700 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.7e-128
Identity = 249/256 (97.27%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ-LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQN 60
           MRLKINKACDLSSISVLPPQ LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQN
Sbjct: 135 MRLKINKACDLSSISVLPPQRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQN 194

Query: 61  SFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDS 120
           SFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDS
Sbjct: 195 SFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDS 254

Query: 121 KCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSL 180
           KCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSL
Sbjct: 255 KCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSL 314

Query: 181 LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDF 240
           LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDF
Sbjct: 315 LQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDF 374

Query: 241 ISTFTKEMKVSACCVK 256
           ISTFTKEMK     +K
Sbjct: 375 ISTFTKEMKAMISTLK 390

[Close]

BLAST of MELO3C006108 vs. ExPASy TrEMBL
Match: A0A1S4DSK1 (protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK     +K
Sbjct: 241 DFISTFTKEMKAMISTLK 258

[Close]

BLAST of MELO3C006108 vs. ExPASy TrEMBL
Match: A0A1S3AV35 (protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK     +K
Sbjct: 241 DFISTFTKEMKAMISTLK 258

[Close]

BLAST of MELO3C006108 vs. ExPASy TrEMBL
Match: A0A1S3AVJ5 (protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ---LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
           MRLKINKACDLSSISVLPPQ   LNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1   MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120
           QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT
Sbjct: 61  QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLT 120

Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180
           DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNS 180

Query: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240
           SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN
Sbjct: 181 SLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKN 240

Query: 241 DFISTFTKEMKVSACCVK 256
           DFISTFTKEMK     +K
Sbjct: 241 DFISTFTKEMKAMISTLK 258

[Close]

BLAST of MELO3C006108 vs. ExPASy TrEMBL
Match: A0A0A0L487 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122370 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.1e-114
Identity = 222/236 (94.07%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 20  QLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENS 79
           +LNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENS
Sbjct: 18  RLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENS 77

Query: 80  IKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLN 139
           IKKNSFFPP+SYSKED QLG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+N
Sbjct: 78  IKKNSFFPPVSYSKEDSQLGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVN 137

Query: 140 KFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGGFK 199
           KFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGGFK
Sbjct: 138 KFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGGFK 197

Query: 200 LISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKVSACCVK 256
           LISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMK   C +K
Sbjct: 198 LISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLK 253

[Close]

BLAST of MELO3C006108 vs. TAIR 10
Match: AT1G01690.1 (putative recombination initiation defects 3 )

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-55
Identity = 117/255 (45.88%), Postives = 177/255 (69.41%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQLNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLS 60
           M++ INKACDL SISV PP L      Q + QLRSQ SQQSFSQG SS     G +SQ++
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRSAEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFSQMT 60

Query: 61  QNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSPL 120
           Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +ED QL  S+SS+ L+++W  + +
Sbjct: 61  QSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSSASI 120

Query: 121 TDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVN 180
            +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ + 
Sbjct: 121 GESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKLTLQ 180

Query: 181 SSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLK 240
            + LQ + K+  D KA +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++
Sbjct: 181 DTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQKIQ 240

Query: 241 NDFISTFTKEMKVSA 252
            +   TFT+E++V A
Sbjct: 241 REICHTFTREIQVLA 255

The following BLAST results are available for this feature:

BLAST of MELO3C006108 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17600.1	2.0e-127	97.27	protein PAIR1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008438047.1	3.4e-127	96.51	PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]	[more]
XP_008438046.1	3.4e-127	96.51	PREDICTED: protein PAIR1 isoform X1 [Cucumis melo] >XP_016898943.1 PREDICTED: pr...	[more]
XP_008438048.1	3.4e-127	96.51	PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]	[more]
XP_004134325.2	7.9e-124	93.80	putative recombination initiation defects 3 [Cucumis sativus]	[more]

BLAST of MELO3C006108 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWX5	2.4e-54	45.88	Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
Q75RY2	1.0e-28	39.77	Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1	[more]

BLAST of MELO3C006108 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1V5	9.7e-128	97.27	Protein PAIR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4DSK1	1.7e-127	96.51	protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1	[more]
A0A1S3AV35	1.7e-127	96.51	protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1	[more]
A0A1S3AVJ5	1.7e-127	96.51	protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1	[more]
A0A0A0L487	2.1e-114	94.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122370 PE=4 SV=1	[more]

BLAST of MELO3C006108 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01690.1	1.7e-55	45.88	putative recombination initiation defects 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..49
None	No IPR available	PANTHER	PTHR37695:SF1	RECOMBINATION INITIATION DEFECTS 3-RELATED	coord: 1..256
IPR034546	Protein PAIR1	PANTHER	PTHR37695	RECOMBINATION INITIATION DEFECTS 3-RELATED	coord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006108.1	MELO3C006108.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0048236	plant-type sporogenesis