MELO3C006002.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C006002.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	serine/arginine-rich splicing factor RS31-like
Location	chr06: 974052 .. 978672 (+)
RNA-Seq Expression	MELO3C006002.jh1
Synteny	MELO3C006002.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTTTAACAACAACCTCTGTTTCTTCAACTCTCAGAGTTCCATCAAGAACCCTAGCTTCATCTCGCGACTTTCTTCACCTCAAGAATCCCACCGCTCATCTCCCTCATCGCTCCCCTCCTCGTACATCCAACTCAATCTCAAAACCTCCAAATTTTCTCTCCACTCCTAAAACCCTTAATCCCTCCATCCCCTTTTCCACCCCCGCCGTTCCTCTTCTCCACTCCTCCACCGACGCCCCGCCTCCGGTTACGCCGCTGCACTCGTCGACGCATCTCAATCTACCGGTACGATTCACTCGGTGGCGAAGGATGTCGGAAGATTCTCGAAGCTGCTGAGAGGGAAGCGAATCGGCAGGGTTTTGAATGATCCGTTGGTGGGAGATGAGGAGAAAGGGCGACTGGTGAAGGAAATTGCAGTGAAGGGAGGGTTTGAAAGGCAGGTGGTGAAGTTAACGAAGATGCTGATTGAGAAGTGCAACCTGAGGATTTTAACGGAGGTGTTTAGTGAATTCGATAGGATTTATGATGAGCTTTGTGGAACGGAAGTGGTGATGGTTTCTTCGAACAAGAAGATGGAGGAAGAAGAGTTGTTTGGGATTGCGAAGAATGCGCAGAGGCTGAGTGGGGCTGTGAAAGTGAAGGTCAGAAGCTTCGTTCATGGGGGATTAATGGTGTAGTGTTGTTGATACAATCAATAACAATCTGTTGGATATGAAGTTTGTAATTCATGAACGACTGCAAAGATGGATTTCAGAATACTGTTATTGAATCAAAATTGTTGGATTAAAGTTCTTATTTACAATCACCATGATTCACAACATCACTTTATGAGGAAATGTTCTCCCTAAACCAATTTTGGAAACCTAAGGATTATTGTCGACAAGGCAACTTTTAGAACGGTGATTTCTTTGATTTAGTTTGATGTTCTAATCGAATATCATTTACATCAGGAACATTGTTAATATCTTTTCATCTTTGTCACAATTTTGAAGAAGTGAACAAATTTGCTCCCTTCTGTGCCCATCCCACTGTCCTATTTGATGTGAAAATTTTGTTTTTGTTTTTGTCTCTTTCATGAGTAACGAGGAAGTATTTGGAATGAAGATTGGTATGCTTTCTTTTTAGAAAAACTTTAATACACAAAGTATTTCATATTTTTAGACTCAACTTTGTTGGTTGAATTAGATGGCGTATAAGTCTATTTAGAAGATAACATGATACTTAATATACTTAAATCATGTAATTATGTAAAATAGTAATTATACAAAATGATTTACGATCAATAATTTAACCTTCATTTTTCTATTAAATTTCTTATTATATTATTGTAACAACAGATTAAAGGACTATTTTAGAACTTGTTAAATGGTAAGTTCATGTAATTCTTAAATCAACAATTTTAAAATAGAGTACTAAAATAAAATTGAGATTAGAGATGAACATAAAGACAAAACAATTCGATTCAAAATACTTATCTATATAATAATATTTTTTAAATTTTGTAAATATAGCTGTTAAAATCTATCGATGGTACGAGTTTATCACATAGATTATATTGAAAATATTGATATTAAAAATATTGGTATGTTACTATTAACGATAGAAACTTATTATCGATAAATTTTAAAAATGGTGCTATATATTATTCATAAAATTGATAATTATTATAAGAAAGGAATGAAGAGAGAATTGGGCCTTCTTACACACGAAGCCCAATCTATCTCAAAACTTTAAATCCCCAAAATACCCTTTCCTGGACGGAAGTCTTCCATAGGAAAGTCAGATAATCGGACGGTCTGAAAGGAACAACGTCAACAGTACCGGTCTTGCTTCGCGGTTTAAATTGAATCGAATTGCATCATTAGGGCATCTTCGTTAAAAAGACTCTGCCTTTCTCTTCCTCCTAGGGTTTCTCTGTTCTGTTCGAATCCGAGAATCTGCAAGGTTTGTTCTCTTTAATCCTTTGGTAATTGATCTACTTGGTCGTTTTATTTTTGGTTTCTCGTCAAATCCCCGAACCAAGTTCTTTCTTTGCTTTCATCGTTTGATTCGAAAGAAAATAGGTCGATTCATGTCGATGAAGTTTATATATTTGGAGGAAGCTGTTATCTTTCTTTCACTTTTCATTTGATTAACGTTCGAACTTATTGATTTCGGTTTAATATTTTCTACAGTACGATCGTTTGTAGCAACGATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAACTGGAGCGCTTATTCTCCAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTATATTGCAAATTCTTTAATGTAGTATGCCATTTTTAACGCAGATGTTAGTAAGTGGGTCATCACTCGTGCAGATTGTATTGTACGAAGGATCACTTTTGTGGTCAGCTTTGAATGAATGGATTTTGTTGAATATTGGTCATAAAACCATCTTTTAGTATTGTCAAGTAGAATTCCTTCTTTTAAGCTTCATAGTTTGGAGATTTGTTTTGTTTGTTTTTTTTAACATTTTTACATGTGGATGTTTGTGCATCAACTTCATCACTGGAATCATCTTACCTTTTTTTTTTGTTAACTGAGATTGCTTACTTTAGGCATGAGTTTTAAATGATATTTTTTTTCTGGAAAATTTCCTTGGTCCTCACCCACCTTGCCTTACATCGTATGAAGTATTGAATTGTGGTATTATAGTGCAAGGCTGCTCCACAGATACTAACACTAAGTGTAAAAGTAATATCACGTTTTTATTAATAATTCTAAAACTGATGTTTTTTACATAATAAAATCCAGTTGGATGCATAGCTATTATGCTGTGAATATCATCCAATGGTCCATTTTCTGATGAAAACTTAATGGCAGGCACAATTGCTATTTTTATGGGGAAAACCTCCATATAAGATGTTTCTTTTGACGCAGGAATTTCTTCTAAGGAAAATGAGCCAAGCTCCTATCTGGGCTCACCACCATGACACCATCTGTGCATTAAAATTAATTTGGAAGGAAACTTCCTGCTTGCCTGCTTACCTTCACCTACAGATAGCATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCATCACTTAAGTTGCAATACACCAGAATCGTCTTAATGGATTGATCTTTATCTCATGCCTCATCAATTAAGTTGCAATTCATCAGAATCGTGTTAATGGATTGATCTTTATCTCATGCCTTGCCTATCTATCACCACTGATCATAGGACATCACTGAAATCTGATCATGCCTTCCATATGATAATAGTGGCTGAATGAAATCTATCATGCCTTCCATATGATAATAGTGGCTGAATGAAATCTGTCATGCCATGCCTTCCATATCTGAACTCGTGCTGTGTGAAGGTGAAGGATAGTTGAATTTTTGGATTAAAACCTTAAGTAGGCAACCATCTTAGTCCATCATGCAACGTCTCTACCGCTATATGTGCATCAGTCCTCCCATATTTGCAGGTGTTGTATTTTTTATAGTTTATCCCAGGGAGAGAAATCACGGGGCTGAGTGACAATACCTGCTAAATAGATGATGCTTCAACAGCATACCAGTTTTGTATGTCTAATTGTTATTATTTGGCAGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCCAGGGTAGACCTCTCTCACTACGTTTTTCTGTGCCCATTGTTCTTCCTTTTGGGTCTATGCATGTTAGAAGCTGTTTTTTTTCCATGATCCGTAGATAGATATTTTATTAACTTTGGGTTGGTTGGTTTAGGGTGAACGAGGTCGTCATCGTGATGGGTCCAAGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTCGACCCCATCCGTACAAGAGTACGTGATATTGAAAGACACTTCGAACCCTATGGGAAAGTGCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAGGAGGATGCCACAAAAGCCCTTGAGTGTACCCACATGAGGTAAGCTGTGTCTTGATTCTCCTGCAAGCTTGCTCTTTCTATTTGGTGTATTTATTTTCTTCTCTCTTATGGACGTGAAGTATTTATACTGTGCTGTATAATTTTGCAGCAAGATATTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGACGATGGCGAGAGGGGCGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTGGTTATGGGCGGCCAGGGGATAGTCCCTACAGGAGGTCTCCAAGTCCAGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTCATAGCCCTGCTTACGATAGATATAATGGGCCCTATGAACGACGTAGAAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTGGTAGATTTCGCAGGTATTTATTCTTCTTTGATAGTTGGCACAGCCTGCTTTTTGATTTACCATAACTTGTAGTTGAAGCTAACTGCCGTTTTCCTGATGTCTTTGTTGGCAGCCGTTCACCCATTCGGAGGTCAAGAACCTGA

mRNA sequence

ATGGATACTTTAACAACAACCTCTGTTTCTTCAACTCTCAGAGTTCCATCAAGAACCCTAGCTTCATCTCGCGACTTTCTTCACCTCAAGAATCCCACCGCTCATCTCCCTCATCGCTCCCCTCCTCGTACATCCAACTCAATCTCAAAACCTCCAAATTTTCTCTCCACTCCTAAAACCCTTAATCCCTCCATCCCCTTTTCCACCCCCGCCGTTCCTCTTCTCCACTCCTCCACCGACGCCCCGCCTCCGGTTACGCCGCTGCACTCGTCGACGCATCTCAATCTACCGGTACGATTCACTCGGGTTTTGAATGATCCGTTGGTGGGAGATGAGGAGAAAGGGCGACTGGTGAAGGAAATTGCAGTGAAGGGAGGGTTTGAAAGGCAGGTGGTGAAGTTAACGAAGATGCTGATTGAGAAGTGCAACCTGAGGATTTTAACGGAGGTGTTTAGTGAATTCGATAGGATTTATGATGAGCTTTGTGGAACGGAAGTGGTGATGGTTTCTTCGAACAAGAAGATGGAGGAAGAAGAGTTGTTTGGGATTGCGAAGAATGCGCAGAGGCTGAGTGGGGCTGTGAAAGTGAAGGGTTTCTCTGTTCTGTTCGAATCCGAGAATCTGCAAGTACGATCGTTTGTAGCAACGATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAACTGGAGCGCTTATTCTCCAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCCAGGGGTGAACGAGGTCGTCATCGTGATGGGTCCAAGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTCGACCCCATCCGTACAAGAGTACGTGATATTGAAAGACACTTCGAACCCTATGGGAAAGTGCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAGGAGGATGCCACAAAAGCCCTTGAGTGTACCCACATGAGCAAGATATTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGACGATGGCGAGAGGGGCGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTGGTTATGGGCGGCCAGGGGATAGTCCCTACAGGAGGTCTCCAAGTCCAGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTCATAGCCCTGCTTACGATAGATATAATGGGCCCTATGAACGACGTAGAAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTGGTAGATTTCGCAGCCGTTCACCCATTCGGAGGTCAAGAACCTGA

Coding sequence (CDS)

ATGGATACTTTAACAACAACCTCTGTTTCTTCAACTCTCAGAGTTCCATCAAGAACCCTAGCTTCATCTCGCGACTTTCTTCACCTCAAGAATCCCACCGCTCATCTCCCTCATCGCTCCCCTCCTCGTACATCCAACTCAATCTCAAAACCTCCAAATTTTCTCTCCACTCCTAAAACCCTTAATCCCTCCATCCCCTTTTCCACCCCCGCCGTTCCTCTTCTCCACTCCTCCACCGACGCCCCGCCTCCGGTTACGCCGCTGCACTCGTCGACGCATCTCAATCTACCGGTACGATTCACTCGGGTTTTGAATGATCCGTTGGTGGGAGATGAGGAGAAAGGGCGACTGGTGAAGGAAATTGCAGTGAAGGGAGGGTTTGAAAGGCAGGTGGTGAAGTTAACGAAGATGCTGATTGAGAAGTGCAACCTGAGGATTTTAACGGAGGTGTTTAGTGAATTCGATAGGATTTATGATGAGCTTTGTGGAACGGAAGTGGTGATGGTTTCTTCGAACAAGAAGATGGAGGAAGAAGAGTTGTTTGGGATTGCGAAGAATGCGCAGAGGCTGAGTGGGGCTGTGAAAGTGAAGGGTTTCTCTGTTCTGTTCGAATCCGAGAATCTGCAAGTACGATCGTTTGTAGCAACGATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAACTGGAGCGCTTATTCTCCAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCCAGGGGTGAACGAGGTCGTCATCGTGATGGGTCCAAGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTCGACCCCATCCGTACAAGAGTACGTGATATTGAAAGACACTTCGAACCCTATGGGAAAGTGCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAGGAGGATGCCACAAAAGCCCTTGAGTGTACCCACATGAGCAAGATATTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGACGATGGCGAGAGGGGCGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTGGTTATGGGCGGCCAGGGGATAGTCCCTACAGGAGGTCTCCAAGTCCAGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTCATAGCCCTGCTTACGATAGATATAATGGGCCCTATGAACGACGTAGAAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTGGTAGATTTCGCAGCCGTTCACCCATTCGGAGGTCAAGAACCTGA

Protein sequence

MDTLTTTSVSSTLRVPSRTLASSRDFLHLKNPTAHLPHRSPPRTSNSISKPPNFLSTPKTLNPSIPFSTPAVPLLHSSTDAPPPVTPLHSSTHLNLPVRFTRVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKCNLRILTEVFSEFDRIYDELCGTEVVMVSSNKKMEEEELFGIAKNAQRLSGAVKVKGFSVLFESENLQVRSFVATMRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT

Homology

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BLAST of MELO3C006002.jh1 vs. NCBI nr
Match: KAE8650222.1 (hypothetical protein Csa_011015 [Cucumis sativus])

HSP 1 Score: 716 bits (1847), Expect = 1.83e-249
Identity = 360/371 (97.04%), Postives = 364/371 (98.11%), Query Frame = 0


Query: 99  RFTRVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKCNLRILTEVFSEFDRIY 158
           R  RVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEK  L ILTEVFSEF+R+Y
Sbjct: 563 RIGRVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVY 622

Query: 159 DELCGTEVVMVSSNKKMEEEELFGIAKNAQRLSGAVKVKGFSVLFESENLQVRSFVATMR 218
           DELCGTEVVMVSS+KKMEEEEL GIAKN QRLSGA+KVKGFSVLFESENLQVRSFVATMR
Sbjct: 623 DELCGTEVVMVSSSKKMEEEELIGIAKNVQRLSGAIKVKGFSVLFESENLQVRSFVATMR 682

Query: 219 PIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGY 278
           PIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGY
Sbjct: 683 PIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGY 742

Query: 279 DRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLN 338
           DRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLN
Sbjct: 743 DRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLN 802

Query: 339 VRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGG 398
           VRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGG
Sbjct: 803 VRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGG 862

Query: 399 YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRF 458
           YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRF
Sbjct: 863 YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRF 922

Query: 459 RSRSPIRRSRT 469
           RSRSPIRRSRT
Sbjct: 923 RSRSPIRRSRT 933

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BLAST of MELO3C006002.jh1 vs. NCBI nr
Match: KAG6597062.1 (Serine/arginine-rich splicing factor RS31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655 bits (1689), Expect = 3.36e-231
Identity = 376/554 (67.87%), Postives = 411/554 (74.19%), Query Frame = 0


Query: 1   MDTLTTTSVSSTLRVPSRTLASSRDFLHLKNPTAHLPHRSPPRTSNSISKPPNFLSTPKT 60
           MDTLT  S  STLRVPS TLASSRD LHLKN +AHLPHRSP R SNSISKPPNFLST KT
Sbjct: 1   MDTLT--SSVSTLRVPS-TLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKT 60

Query: 61  LNPSIPFSTP---------AVPLLH---------SSTDAPPPVTPLHSST----HLNLPV 120
           LNP +PFS+          + PLLH         +  DA      +HS        +  +
Sbjct: 61  LNP-LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVL 120

Query: 121 RFTRV---LNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKCNLRILTEVFSEFD 180
           R  R+   LNDP V +EEKGRLV+EIA KGGFE+QVVKLTKMLIEK  L IL EV SEF+
Sbjct: 121 RTKRIGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFE 180

Query: 181 RIYDELCGTEVVMVSSNKKMEEEELFGIAKNAQRL------SGAVKVKGFSVL------- 240
           RIYDELCGTEVV+VSSN+KM+E+ELFGIAKN QRL      +G    +GF +L       
Sbjct: 181 RIYDELCGTEVVLVSSNRKMQEQELFGIAKNVQRLKALKIRAGTGNCRGFRILGPATWGA 240

Query: 241 -----------------------------------------------FESENLQVRSFVA 300
                                                          FES+NLQ R  V+
Sbjct: 241 ALELFDRMPMTWVVSWTAIGIMGLLRWALQKDTGFLFLFLSPRVFLVFESKNLQARLIVS 300

Query: 301 TMRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLP 360
           TM+PIFVGNFGYDTRQSELER F+KYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDN+P
Sbjct: 301 TMKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMP 360

Query: 361 FGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGK 420
           FG+DRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPI TRVRDIERHFEPYGK
Sbjct: 361 FGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGK 420

Query: 421 VLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRR 469
           VLNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR
Sbjct: 421 VLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRR 480

[Close]

BLAST of MELO3C006002.jh1 vs. NCBI nr
Match: XP_004133800.1 (serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus] >XP_008437857.1 PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X1 [Cucumis melo] >KAA0048868.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis melo var. makuwa] >TYK20820.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 513 bits (1320), Expect = 9.98e-180
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 456
           GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG
Sbjct: 181 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 457 RFRSRSPIRRSRT 469
           RFRSRSPIRRSRT
Sbjct: 241 RFRSRSPIRRSRT 253

[Close]

BLAST of MELO3C006002.jh1 vs. NCBI nr
Match: XP_038893478.1 (serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida])

HSP 1 Score: 497 bits (1280), Expect = 1.20e-173
Identity = 250/254 (98.43%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 456
           G YGRPGDSPYRRSPSPVFRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGG
Sbjct: 181 G-YGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 457 -RFRSRSPIRRSRT 469
            RFRSRSPIRRSRT
Sbjct: 241 GRFRSRSPIRRSRT 253

[Close]

BLAST of MELO3C006002.jh1 vs. NCBI nr
Match: XP_022147391.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia])

HSP 1 Score: 481 bits (1238), Expect = 2.81e-167
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 456
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240

Query: 457 GRFRSRSPIRRSRT 469
            RFRSRSPIRRSRT
Sbjct: 241 -RFRSRSPIRRSRT 252

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BLAST of MELO3C006002.jh1 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 2.2e-95
Identity = 189/264 (71.59%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN PF
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPIRT+  DIE+HFEPYGKV
Sbjct: 61  GYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR 396
            NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR
Sbjct: 121 TNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRR 180

Query: 397 AGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPDYGRNRS 456
           +    Y R     Y R PSP   RRPSPDYGRA SP YDRY GP  YERRRSPDYGR RS
Sbjct: 181 SLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGR-RS 240

Query: 457 PEYG-------GRFRSRSPIRRSR 469
            +YG        R+RSRSP+ R R
Sbjct: 241 SDYGRQRSPGYDRYRSRSPVPRGR 263

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.7e-92
Identity = 185/264 (70.08%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MR ++VGNF YDTR S+LERLFSK+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 277 GYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPY 336
           GY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPY
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRPTKTLFVINFDPIRTRERDMERHFEPY 120

Query: 337 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 396
           GKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S 
Sbjct: 121 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR 180

Query: 397 RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPDYGRNRS 456
           R             RRSPSPV+RRRPSPDY R  SP YDRY G  PYERR+SPDYGR RS
Sbjct: 181 R-------------RRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGR-RS 240

Query: 457 PEYG-------GRFRSRSPIRRSR 469
            +YG       G  RSRSPI+R+R
Sbjct: 241 SDYGRARARSPGYDRSRSPIQRAR 249

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 268.1 bits (684), Expect = 1.9e-70
Identity = 144/255 (56.47%), Postives = 176/255 (69.02%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 277 GYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPY 336
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 337 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 396
           GK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 397 RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPE 456
           RR     R      RRSPSP  R R SPDYGR  SP   +       R SPDYGR R   
Sbjct: 181 RRDRSPDR-----RRRSPSPYRRERGSPDYGRGASPVAHK-----RERTSPDYGRGR--- 237

Query: 457 YGGRFRSRSPIRRSR 469
                RS SP +R+R
Sbjct: 241 -----RSPSPYKRAR 237

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 264.2 bits (674), Expect = 2.7e-69
Identity = 156/266 (58.65%), Postives = 190/266 (71.43%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   F
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 277 GYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIRTRVRDIERHFEP 336
           G   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD   TR RD+E+HFEP
Sbjct: 61  GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120

Query: 337 YGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDES 396
           YGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+    S
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGN--GHS 180

Query: 397 PRRAGGYGRPGDSP--YRRSPSPVFRRRPSPDYGRAHSP--AY--DRYNGPYERRRSPD- 456
           P R     R   SP   RRSPSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  
Sbjct: 181 PER-----RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSP 240

Query: 457 YGRNR--SPEYG-GRFRSRSPIRRSR 469
           Y ++R  SPEYG  R  + SP RR R
Sbjct: 241 YKKSRRGSPEYGRDRRGNDSPRRRER 259

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy Swiss-Prot
Match: Q9NEW6 (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=6239 GN=rsp-3 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 1.0e-15
Identity = 86/270 (31.85%), Postives = 117/270 (43.33%), Query Frame = 0


Query: 220 IFVGNFGYDTRQSELERLFSKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNLP 279
           ++VGN   D R+ E+E +F KYGR++ +D+KSG    FAFV FED RDAEDA+R  D   
Sbjct: 11  VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG-- 70

Query: 280 FGYDRRRLSVEWARG------------ERGRH--------RDGSKSMANQRPTKTLFVIN 339
           + +D RR+ VE+ RG            + G H        R G +    QR T    ++ 
Sbjct: 71  YEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVE 130

Query: 340 FDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVS 399
             P     +D++ H    G V    + R+    V+F   ED   A+     +K       
Sbjct: 131 GLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 190

Query: 400 VEY-ALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDR 459
             Y  +R+D   G         +GG GR       RS SP   RR SP Y    S +  R
Sbjct: 191 TAYIRVREDNSSGG-------GSGGGGRDRS----RSRSPRAERRASPKYSPRRSRSRSR 250

Query: 460 YNGPYERRRSPDYGRNRSPEYGGRFRSRSP 464
                 R RS     +RSP       SRSP
Sbjct: 251 -----SRSRSRSRSASRSP-------SRSP 255

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DBI0 (Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00820 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 4.83e-180
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 456
           GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG
Sbjct: 181 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 457 RFRSRSPIRRSRT 469
           RFRSRSPIRRSRT
Sbjct: 241 RFRSRSPIRRSRT 253

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L8H4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 4.83e-180
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 456
           GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG
Sbjct: 181 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 457 RFRSRSPIRRSRT 469
           RFRSRSPIRRSRT
Sbjct: 241 RFRSRSPIRRSRT 253

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AUZ7 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483164 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 4.83e-180
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 456
           GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG
Sbjct: 181 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 457 RFRSRSPIRRSRT 469
           RFRSRSPIRRSRT
Sbjct: 241 RFRSRSPIRRSRT 253

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy TrEMBL
Match: A0A6J1D279 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016334 PE=4 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 1.36e-167
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 397 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 456
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240

Query: 457 GRFRSRSPIRRSRT 469
            RFRSRSPIRRSRT
Sbjct: 241 -RFRSRSPIRRSRT 252

[Close]

BLAST of MELO3C006002.jh1 vs. ExPASy TrEMBL
Match: A0A6J1ECU9 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432011 PE=4 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 5.77e-155
Identity = 226/247 (91.50%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFE+ERDAED+IR LDN+PF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEEERDAEDSIRSLDNMPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GYDRRRLSVEWARGERGR RDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRSRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 396
           LNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGD +D+SPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDHYDDSPRRA 180

Query: 397 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 456
             YGR GDSPYRRSPSPV+ RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSP+YG 
Sbjct: 181 A-YGRLGDSPYRRSPSPVYHRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPDYG- 240

Query: 457 RFRSRSP 463
             R+RSP
Sbjct: 241 --RNRSP 243

[Close]

BLAST of MELO3C006002.jh1 vs. TAIR 10
Match: AT3G61860.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 350.9 bits (899), Expect = 1.6e-96
Identity = 189/264 (71.59%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN PF
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 277 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 336
           GY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPIRT+  DIE+HFEPYGKV
Sbjct: 61  GYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV 120

Query: 337 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR 396
            NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR
Sbjct: 121 TNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRR 180

Query: 397 AGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPDYGRNRS 456
           +    Y R     Y R PSP   RRPSPDYGRA SP YDRY GP  YERRRSPDYGR RS
Sbjct: 181 SLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGR-RS 240

Query: 457 PEYG-------GRFRSRSPIRRSR 469
            +YG        R+RSRSP+ R R
Sbjct: 241 SDYGRQRSPGYDRYRSRSPVPRGR 263

[Close]

BLAST of MELO3C006002.jh1 vs. TAIR 10
Match: AT2G46610.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 339.3 bits (869), Expect = 4.8e-93
Identity = 185/264 (70.08%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           MR ++VGNF YDTR S+LERLFSK+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 277 GYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPY 336
           GY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPY
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRPTKTLFVINFDPIRTRERDMERHFEPY 120

Query: 337 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 396
           GKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S 
Sbjct: 121 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR 180

Query: 397 RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPDYGRNRS 456
           R             RRSPSPV+RRRPSPDY R  SP YDRY G  PYERR+SPDYGR RS
Sbjct: 181 R-------------RRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGR-RS 240

Query: 457 PEYG-------GRFRSRSPIRRSR 469
            +YG       G  RSRSPI+R+R
Sbjct: 241 SDYGRARARSPGYDRSRSPIQRAR 249

[Close]

BLAST of MELO3C006002.jh1 vs. TAIR 10
Match: AT2G46610.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 284.6 bits (727), Expect = 1.4e-76
Identity = 159/234 (67.95%), Postives = 181/234 (77.35%), Query Frame = 0


Query: 247 IDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMA 306
           + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++
Sbjct: 5   LHIDAGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVS 64

Query: 307 NQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECT 366
           NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ T
Sbjct: 65  NQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDST 124

Query: 367 HMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDY 426
           H SK+LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY
Sbjct: 125 HNSKLLDKVVSVEYALREAGEREDRYAGSRR-------------RRSPSPVYRRRPSPDY 184

Query: 427 GRAHSPAYDRYNG--PYERRRSPDYGRNRSPEYG-------GRFRSRSPIRRSR 469
            R  SP YDRY G  PYERR+SPDYGR RS +YG       G  RSRSPI+R+R
Sbjct: 185 TRRRSPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSPGYDRSRSPIQRAR 223

[Close]

BLAST of MELO3C006002.jh1 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-71
Identity = 144/255 (56.47%), Postives = 176/255 (69.02%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 277 GYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPY 336
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 337 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 396
           GK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 397 RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPE 456
           RR     R      RRSPSP  R R SPDYGR  SP   +       R SPDYGR R   
Sbjct: 181 RRDRSPDR-----RRRSPSPYRRERGSPDYGRGASPVAHK-----RERTSPDYGRGR--- 237

Query: 457 YGGRFRSRSPIRRSR 469
                RS SP +R+R
Sbjct: 241 -----RSPSPYKRAR 237

[Close]

BLAST of MELO3C006002.jh1 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-71
Identity = 144/255 (56.47%), Postives = 176/255 (69.02%), Query Frame = 0


Query: 217 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 276
           M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 277 GYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPY 336
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 337 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 396
           GK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 397 RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPE 456
           RR     R      RRSPSP  R R SPDYGR  SP   +       R SPDYGR R   
Sbjct: 181 RRDRSPDR-----RRRSPSPYRRERGSPDYGRGASPVAHK-----RERTSPDYGRGR--- 237

Query: 457 YGGRFRSRSPIRRSR 469
                RS SP +R+R
Sbjct: 241 -----RSPSPYKRAR 237

The following BLAST results are available for this feature:

BLAST of MELO3C006002.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650222.1	1.83e-249	97.04	hypothetical protein Csa_011015 [Cucumis sativus]	[more]
KAG6597062.1	3.36e-231	67.87	Serine/arginine-rich splicing factor RS31, partial [Cucurbita argyrosperma subsp...	[more]
XP_004133800.1	9.98e-180	100.00	serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus] >XP_00843...	[more]
XP_038893478.1	1.20e-173	98.43	serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida]	[more]
XP_022147391.1	2.81e-167	96.06	serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia]	[more]

BLAST of MELO3C006002.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92964	2.2e-95	71.59	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	6.7e-92	70.08	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
P92966	1.9e-70	56.47	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92965	2.7e-69	58.65	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
Q9NEW6	1.0e-15	31.85	Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=62...	[more]

BLAST of MELO3C006002.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DBI0	4.83e-180	100.00	Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A0A0L8H4	4.83e-180	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1	[more]
A0A1S3AUZ7	4.83e-180	100.00	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A6J1D279	1.36e-167	96.06	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Momordica charantia...	[more]
A0A6J1ECU9	5.77e-155	91.50	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of MELO3C006002.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61860.1	1.6e-96	71.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.1	4.8e-93	70.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.2	1.4e-76	67.95	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	1.4e-71	56.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.2	1.4e-71	56.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 67..133 e-value: 3.3E-17 score: 73.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..32 e-value: 8.8E-5 score: 22.3 coord: 68..130 e-value: 2.6E-12 score: 46.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..47 score: 9.336864
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 66..137 score: 15.220978
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 7..59 e-value: 1.6E-9 score: 39.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 60..144 e-value: 3.2E-19 score: 70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..226
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 4..225
None	No IPR available	CDD	cd12466	RRM2_AtRSp31_like	coord: 67..136 e-value: 1.01915E-42 score: 136.909
IPR029537	Arginine/serine-rich-splicing factor RSP31/31A	PANTHER	PTHR23147:SF146	SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED	coord: 4..225
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006002.jh1.t1	MELO3C006002.jh1.t1	mRNA
MELO3C006002.jh1.t3	MELO3C006002.jh1.t3	mRNA
MELO3C006002.jh1.t2	MELO3C006002.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism