MELO3C005872 (gene) Melon (DHL92) v4

Overview


Name	MELO3C005872
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Polypyrimidine tract-binding protein-like protein 2
Location	chr09: 23581121 .. 23590659 (+)
RNA-Seq Expression	MELO3C005872
Synteny	MELO3C005872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTCTCTCTCTAAACTCATACACCGATAATCTCATTTTCCCCAAAAGCTGCCAGTGATTTTCCATTTTCCATTACCAAATCCAATCCCAGAATCGGAGTTGCCATGGTCAAGCTAGTCTCCGCTAGAGATTTCAGGGTCTACGGCCCTCGGCCGCTCCGGAACCGGGCGGAGTACATCAATGCCGGCCTCTATTTGTTCGCCACTATCCTCCTTCTCGGTGGCTTTGTTGCTCAGCTTTCCCGAGAACCCAAATCTGGATTGGCCCTAATTCTTCTCGCCACTTCCCTAATTGCCATCGTTAATTTGCACGATCTCTTCGCCCATCTCGCCGGAATTGATCATCGGTTGCCACTGCTTGTTCAGTACGATGCCCAGCTTTTTTTTGTGGAATTTGCTGTTCCGTTTCTTCAGGCGATTGGGTCGCTGCTCTTGTCTTTGGCTGCACTGTTTCTTCTAATTCAGGTTCCCATTCATCGTTTGCTTGCTTTACTCTGCTTAATTTAGTTTTCTAGGTTAATAGTATACCATTTTTGCTTTGGAATTTCTAACAAAATTGCACTTGTCGATCTTGATGAGAAATTGTTTTGAGGGGCTGGTCAATCGGTTTTCTGAGATGTTCTGTGTGCTAACTCTTGTTATCCTCTGTCATAAGTCTTGGATTTTAGAATCAAAATCAGCAACCCTTTTAGAACCATCCACTTATTTGGATGGTTTCAAGTTTCAGTCAATGATTTCAGTGCCATTTTCCCTGCCATTGGTTGTGATAATTTTGAGCAATGAGTGACTGAGTGAGTTATGTGAGGCCTGTTGGCAACATTTCTGCTACTCATTTCTTCAATTTTTCTTTCAAGAAATAAAAGCAAAACTGTGTTTGGAAATTGTTTCTGTTTCCTACTGAAATTTGAAAGAACAAAAAAGCATAAGATGGGTAATTTTGGAGGGCATTATTGTGTAGTTTTTTCAGCAATACTCCCAAATTTCAAAATTTCAATTATAAACAAAAGAACAAGATGCAGTCGTTTCAGTAATGTTTAATTGTTCCAATAGTGTTGTTGTAAGTACTTGACAATGTTTTGGACTCACCTGACTTTGTTACATGCTATCACTGGAGGCCCTCCTCACACTCGGGACACAGAATTAAAAAACCCCGTGTCAAAGATCAAAAGCTATGGCGAAATCTAGAAAATGCTATCCTCGGTTTCAATGATTGCACATTGTAGGAAAACTGTTTGATCAACTTCATTCCGTTCCTGATGTTAACTCTTTACAGCATTCATGTTTGTTGTGTTGTCCTCCTTTTGCATTTTACAAGAGCTGCCATCCAATTTGCTGCTGCAGGAAAAGAAGGGACACGATTATGACAAACTAGAAAAGCATGCTTCAAATATGCTTATTGCGGGTCCTGCCTTATGGATGCTTGGATCGATCCACAACTCATGCCAAATCTATGAAAGGGCCGATGGACATGTTCAAATCTTGCAGCAGAGTGTCCATATTCCATTTTTAATAGGAAGCTTACTGTTTTTTGTTGCAGCAGTTCTCAATAGCTACGAGCAAGTTGGGTTAGCCCATCATGGTCTCAAACTTCTGGTACGTGACATTGAATATATACATTTTACTGTCAATAGCGAACAATTGATTCTGACTTGCCTTTCAAAATACTTAGTCAAGAAACGAAAAAGTTGTCACAATGATTATGGTTCCACGCTCAAGAATAATAGAATGTCAATGACGTCAGGTACAGAAATCAAGATACATTGGTGATCGTGAAACTCTAAAGCTTAAGAACACCAAGTTAGAACTATAACCACAGTTCATATTGTTGTTTTGGTATGAATTCAAATTTTAAACAGTTTGATGAATATTTTAGTTAAAAGCAACAAACAAAAGTTTGATATTCATCTAACAAAATGGTTGCATAATATTTGCTTCATGATGAATGGCATTTTAATGAAGTATCAAGTGTTGACGAGGGTGTGAATGCAGGGCAAAAACTGGATTTGGTTAGGTATCTTTGGGAGCTTATCACTCTTGTTGGGCGGATTGGCGAACGTGCTTAAAGTGTTCAAGATGCAGCAGTTCGAGGGACTACGACTTGAGAAGCTTCGAGGAGGGGCAAACGAGCGGCTTCTTGGGGAAAGAGAAGGCAGGATTCCTCTGATTCTAGAGGATCAGGGTAGGAGAAAACGACACTCGGATGAAGAAAGAGGAAGGGAAGCCAGACCGACGCCTTATAAAGATGTACTCGTAGGCCAATCACCCTGAAGTTCTCTTTCCCTCTTCCACTTCCATTACTGACCCCTGCAACTGAGCTTGATTAATCTCTGGAGAGTATCTTTTGTTACAGAATATTGTGTGCATTTACATATAGAATTAATGTGATTATGATTATGATCATGATTGATGAGCAAGTTCGTAGAAGTCCGTAGAAGTAATAGAATACTGTTGATATGAATTTGATATCTGATCTTGTTTGGTTGTTTCTGTTTGGACATTCAACTTATCTGTTGATATCAGAAGAATGGGTTTAAGTTTAACTGACTTTTGAAATAGTTTGGTGTATGTTCTCATTTTCTTCCTCTCTCTTTCCTCCTTTAAAATATTGTCTTTTAATATTTCATTTTTTCTTTAATTTTGATTCTTCATTATCTTTCGATGCTGAATTTGTTTTCTCTTTCAATATCAATATTATTCTCTTTTTAAATAGTTATCTTGATTTCTCATTTGAATTATTAGATAATTCCCTTTTGAATTGTGATTTTTCATTAATTTATCTTTCGGAATCTATATACATACCTATAGGATAGGTCTTGCCAAGAGCATCTCAGTATCAAGTAAAGAGATAAGTAGGTTGAAATTGATTAAGGCAAGAAAATGATTTCTTAGTTATAATTAAGGGGTATTTTCAACCATTTCTGCATTTTCTATATCAAGATATAAATTAATAGTTGCACCTAATAATATACTCTAAAAAAATTTAAAATATATATATATATATATATATATATATATATAAAGATAATTGCAGAATCCAACTTTTCTCACAATCCCAAGTAAAAAGCTAAGGACTTTTCTTAGGAAAAAAACGAATGATTGTATTTTTAGGTTGGGCCTTTTTAGCCCTATCTAATTTTACCACAAACTTTTTTAAATGTGTCCTAATTATAAATTTAAAACTTAAAAATAATTATTACAATTTAAGCTTTTTTACGAAAATCTTCATGTGCATTATTTTTTTTAAAAGAAAATATACGTTTGAATTATTAAATATATGATATAAAATTGAAAAAATTATGTGAAAAACAAGGTTAGTACTTAAAAATTTGGTGCATTCCACTTAAGAAGCATAAAAAAAAAAAGAAAAAAGAATCCAATATAATTATTTATTATTACTATTTGAATAAAATGTTCGATATAATCTTTAAAGAGAAATATTTTTGTAAATAAATTTAAAAGATAAAACTCCACCTCATCATATTCAAACATGGTAGGACGATTTTACCCCTCATATAAAAGGAAGCCATTTATCCGGTGGAAAGCCCAGAAGAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAGAAAAAACATATATTTCAATCGTTTTAGATTATGCTTACAGAAAAGCCCATCGAAATCTTCTCCCTTTCCAGCTCTCCGTGAAACCCTAACTTCCATATCCTCACCAATTCCTTGCTTTCCTCAGGGTTTATCTTTAATAATCTCAGGTATTTTACTTTGCAATTTCGATCTCCTTGTGTACCGCTATTTTTTGCTCCCAATTTTTAGGTATTTCGACCTCGGATACTGTCTATTTCCGTCTGGATTTGCGCTTTGGGGTTTTCGATCTGCATGTCTGTTTCTTCACAGATTGTTTTGGGTCTTTTGGCTTTTTTCCATTTTTTTTTAGTGTAATCAATTGTTTCTTATGTGATTTTGCATCTAAGTATTTTTGTTGTAATTACGTGGACGATGAATGGCATTGCAATGTTGTGTGAATTGTTGGATTGATTTCTATGATGAGTACTCGATAATGGATTGTGAACTGCTCTAGTTATTTGTACGTGTTGATATTTATTGGTGATGTTGCTTTTACTCTTTATGTTTGGTGGCTCGATTTGTGCTTCGAAATTGCCTTTGATTGGACATGTGGTGATTAAATTTTTTGGTCCGTTTGTTTCTGTTTTCAATATTAAGTGCTTTTTCTGTTTTCAATATTAAGTGCTTCCTCTGAAAGTTAGGGAGAAGAGAAAAAGTAGAAGAGGAAGAAGCCAGAGAAAGAGAGTGCAGATTAAAGTCAAACAACTATCCATTACTAATTAAGAAACCCCCTTTTTTTACTGCCTTGTCTTTTTTTATGTACGAAAATTTATACCGCTGTTGTAATGTAATGCACACCTTCTTTTTTTAAAAAAAATTGCACGCCTTTTTGTTCTTAAATTGAACTTGCTATAATGGTTCAATTTTATGCCATGGGCTAAAGCCGAAGACAGTTATCTTAATAGAAAAAGAAACTTATTCATTAATGATTGTGATTGTATTTTATTCATCTCCAGATTCTTCTCTTGCACGAAAAGTAACGACAATGAAATATTGTTCACATCAATGTAGAATTAGGGATTCCATGGTAAAATTGTCTATGTGATAGGGAATTATAAGTTCATGAGTGTGAAGTTCTGTGTTAACTTTGTGGACTAAGTTTGAAGTTTAAATTGAATTAAGGCTTCCCATGATTTTCCAGTGTTCTCCTGTAAGTTGGGCGAAATGGCATCAGTTTCTAGTCAGCCACAATTCCGTTACACCCAACCACCGTCAAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGTACCGAGGAGGAACTCATTGAACTGGGAAAGCCATTTGGAAAAGTCGTGAATACAAAATGTAATGTTGGAGCAAACAGAAATCAAGCTTTTATTGAGTTTGTAAGTGCATTATTTTTGCATCTATTGCTTTCCATCAACAATGGACCTCACTAGCTATTCATTATTGATAAATATTTGACCAAGTTTAATACTGCAGGCAGACATAAATCAAGCTATTGCAATGATATCATATTATGCATCTTCCTCTGAGCCTGCTCAAGTTAGAGGAAAAACTGTCTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAATAAAACAACAGCTGATGTTCCTGGAAATGTGCTTTTAGTAACAATTGAGGGCACTGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTAAGCAGATTGTAGTACATTCTTGTTGCAGTTAAAGGTGAACCTCTGTGGCACTGAGATTAAATTATGGAGATTAGGTTATAGTTTGTCATGTTTCAAAAGCTTTTGTTTGACGTGAATGTAAATGAATCAGCAGGCCCTTGTCAAGGCAATATCTTTGATGGCAGCTTAGTGCATCGGGAGAAAGTGCACATGTGTGTTTGTCTCCTTTCTCCTTTCCTTAACACTACCTCTCTCTTCCCTTCTCTTCTTCCTCAACTTCCTCCTACCTTTCACAGTTTAGGATATTATCATTTCTGCTCTCTTGTGCATCCTTCTCCCTATCATCTCTGCATGTTATGTCAGTGATACTGCTGTCTACATCCAGTCATTAGAATCAGAGAGTAGGAATTTTTTTTTCTTAATTTTTCGATTATCTGTTCACTATTTACGTATTATGCCCTAAAAGACTAACATTTTAAAAAATTAGACAGAAGATTAATCAGATGATATTCCTTTTGGCTTAGCATCTGAATTTTTGGGGTGACTTTGCTTTCTCTTATTAAAATTATAGGACGAATGTTAAATTTGTAGGGGCATTCAACTATTAGTTTACAGCTTATTTTGTTGATGAGTATTTAAGGATAGAGTATACTTATGGCTGGTTATTGATTTCAAACCAGTAGCTGCTCGTTTTCAAGTGAGAGAGGCAGGTGTTACGGACTTGTTTTGAATTTGTGTTTTTTGCTATATCATATCTTCCCTCTCAGAGGAGTTGAAACGTACTTCTTGACCTTTGATTGCCATATGTCATGATGTGTTCTAATCTTCTGTTTTATTTGATGTCTAAGTTCTATGTTATTCTTGAAATTTTTTTTTTGTATCTTCCGTCATATGTTGTCTTTTTACTCTTGTTCCTGGCAGTATCATTGCTATCACAAGAATAAAGTTCTATTTGCTTAATTTTTAGTTTCTTATAGTGGAGTTTGCATTTAAATGTCCAATGTTAATTAGTTGTAGCTATCCATTTAGACATCCTACTTGATCTATATTTGGAGATTTAGGTAGGTTCGTCATGGTTATGATTGTAAATAATTCACATGATAGTAGTCATTTGATAGGTGTTGGGATGTACTGAAATTGTGATGAATGGTGTGATATCATTTTGTTTAATTTCAATCTGAAGTTTATTCAATAATATGCCAGGTTTTTTCTGCCTTTGGATTTGTGCATAAGATTACTACCTTCGAGAAAACAGCTGGATTTCAGGTCCGTGAATATCTATAATACTTGTAGTAATTACACTATTATTATTTCTGAGCTTGGAGAAAATCTTATTCCTATATCGATGTGGACATTTTAGGCGTTGGTGCAATTTTCGGATGCGGAGACTGCCTCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTGACAATTGTATTGAATGTTACACATGGTTTTTTGCCCCTGTTTTATGGAGTGTATAGCAGTAGAAGAGGTGCACATGCACGAGCTTGGTGTCTGTCGATTATTTTTGTTCTTAGTAGTCAATGCATTTTATTTGACTGAAAGATTTTCATTCCATTGCCTGCAGTATTCAACCTGATTCTTCTATGTTATTCTATTTTATGTATCAACAATTTTTTTTTTTGTTTGCAGGTATTTGCTTCCGGATCATGTTGGACCATGTTCCCTTAGAATCACTTACTCTGCCCATACTGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGTCTTGCCAACTTTCTGCTTCTATTCTTTTATGAATGTGTTTATTTCAACTTAGTGTAACATTTCACAATATCTCACAGATAATTTTCCATGTTACTCGTCTGTTTTATCAGTATCCCTTTCTCTCTCTACTTTCTGATAGTATGTTGATTCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGGTAAGGAATGTATTAGGTAGCATGTTGTTTAGTTGTGCCTATGAATTCTCCTTTCTGTACGTGTTACTCATCTGATAAGAAAATGCTTCAAATGTTGTCAAATAAATAAAGAAAGATAAAGCTTCAAATGATGTACTTCTGACAAAAGTGCTAGCTTATCAGTATAAATCTTGACATTTCTTCTTATTGCCTGGTTTTTTATGTTATTTTTCTAAATCCTTTTCATCCTTTGATTGAATTTTTCGTCAGTCACCTTTGCAGTTCACCGTGGGTTTGGATGGAAAGAAACTCGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATATGCAGTCACCTTGGAGGTTTTGCACATGGTATTGCATGACGTGGCAATTTTATAATGAGTTTGTCTGTTGACTATTTATTCATATAGTATAGTTCTTTGCAAATTATTTTATTATGCTGACCAATTATTTCTTTGTCGGTAGGTTTTTTCTGCATTTGGACCTGTCCAGAAGATTGCCATGTTTGATAAGAATGGGGGAGTCCAGGCCTTGATTCAATATCCAGGTATTTCGCTTTAACTAAACTCTTCCTGACATCAATCTCACTTTTGGGTGCAAATGGTAGCATATTTTCTACCGGTTATAACATGATAGAAACCACATTCTTTATGAGTTCAAAATGGGGTTTTTTTTTTGTTATTTCAAATCTGTGAACGAGTTAAATTAACCTTAAAGAACTAGAAGCTTAATCTTAAATAGCTAGAATTTGAGATTTGTAGTGCAATATGAGTTTAAGAAGACAAACACAGCAACGTATTAATATGGTTCAAATTTCAATCTTCATCCATAGTATTTCAATAGAAATATGTAGCATAGAAATCATCATCAGTAATATTCCACTTGTGAGCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTCGAGGGACACTGTATTTATGACGGAGGGTTTTGCAAGCTTCACATCTCATATTCTCGCCATACTGATTTGAGTATCAAGGTATTAAAAACTTCTCTTTTGGTGAGCTGTCCAAGAGCAATATATGTCTCTTTACACAGGAGTTCTTACTTCAATGAAGGTAGTACATGTACTACCGTAGCATTAAGCACTAGACATTTTCCTGGTCCTTGGTGGCCTCATCATCATCAACAAATATTTATTGAAATGAAGATATTATTATAAAAACTATTTAAATTAAAACTCGAAGTTTTTATTTCCTAATTAAGAGCATGTTTTCAATGAACTTTTCTAGTGCTTTGATAAATGCTCTGAAAACAAAAGAAGTTGTTTTTAAGCCCTAAAGTTTTTGCTAGCCGACCCAAGTTATAAATCTTGTTATTATAAGTATCCATATTTTGTAAAATATATGGGAGATATCAAATAATCCTGAATATTGGTTGGGCCCTCCGGTTCATTTCAACCCTTTGACTATACAGAAGATGAATGATCCTAAATGTGTAGTTTGATGTGATTGTAGGTGAATAACGACCGAAGTCGAGACTATACAATTCCAAATAATCCTCCCATGGTGAATTCCCAACCGCCTGTTGTGGGGCAGCAACAACCACATCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAATCAGTATGGTCCTTCCGGAGAGCAGCAGCCTGGGGTGCAGCCTCCACAATCTTCAGGTTGGGGATCGGGCGGTCCTGCTGCGCCCTACTCCTCCATGCCCATGCACAATCCTGGTTACATGCCATCGGGGACAATGCCGCCACAGCATGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCGTATCGCCCCGATCACAGGCAATAGCACGCATTGTCTTCTGTTTTATAGTTGAATGTTCATTCAAGAAAACCAACTAAGCTTTTTAAAGCACTAGAAATGCATTTTGGCAGAGGAAACAAATGTGCATTAAAATTCGATGGTTCCGCGAACTACTCTCACTGTTCAGAACAAATTAGGTCGGTTCATTTCCCTTTTATTTTAAGGGATGTGAATGAATGAATGTAAGATCCCAAGTGTGAAGAACCGAGCACCTTCCTTTGAAGCTAAGTGACGTATTAAACTCGGTTATTATTGATGATCACTGTTTTATAAGTCTTTCTCTTCCTTTTGCCCATTCTTATCACTTCTTGAACTTAATCCTCATTTATGCAATGTACTTTGTTTCAACTGTGGCTAAACTGAGTTGTCTCTCCCCCAGGCTGATGAAACATTGTATTGACGGCACTTTATCTACATCTAAAATTGTGTTTTTTCTT

mRNA sequence

ACCCTCTCTCTCTAAACTCATACACCGATAATCTCATTTTCCCCAAAAGCTGCCAGTGATTTTCCATTTTCCATTACCAAATCCAATCCCAGAATCGGAGTTGCCATGGTCAAGCTAGTCTCCGCTAGAGATTTCAGGGTCTACGGCCCTCGGCCGCTCCGGAACCGGGCGGAGTACATCAATGCCGGCCTCTATTTGTTCGCCACTATCCTCCTTCTCGGTGGCTTTGTTGCTCAGCTTTCCCGAGAACCCAAATCTGGATTGGCCCTAATTCTTCTCGCCACTTCCCTAATTGCCATCGTTAATTTGCACGATCTCTTCGCCCATCTCGCCGGAATTGATCATCGGTTGCCACTGCTTGTTCAGTACGATGCCCAGCTTTTTTTTGTGGAATTTGCTGTTCCGTTTCTTCAGGCGATTGGGTCGCTGCTCTTGTCTTTGGCTGCACTGTTTCTTCTAATTCAGGAAAAGAAGGGACACGATTATGACAAACTAGAAAAGCATGCTTCAAATATGCTTATTGCGGGTCCTGCCTTATGGATGCTTGGATCGATCCACAACTCATGCCAAATCTATGAAAGGGCCGATGGACATGTTCAAATCTTGCAGCAGAGTGTCCATATTCCATTTTTAATAGGAAGCTTACTGTTTTTTGTTGCAGCAGTTCTCAATAGCTACGAGCAAGTTGGGTTAGCCCATCATGGTCTCAAACTTCTGGGCAAAAACTGGATTTGGTTAGGTATCTTTGGGAGCTTATCACTCTTGTTGGGCGGATTGGCGAACGTGCTTAAAGTGTTCAAGATGCAGCAGTTCGAGGGACTACGACTTGAGAAGCTTCGAGGAGGGGCAAACGAGCGGCTTCTTGGGGAAAGAGAAGGCAGGATTCCTCTGATTCTAGAGGATCAGGGTAGGAGAAAACGACACTCGGATGAAGAAAGAGGAAGGGAAGCCAGACCGACGCCTTATAAAGATGTACTCGTAGGCCAATCACCCTGAATGTTCTCCTGTAAGTTGGGCGAAATGGCATCAGTTTCTAGTCAGCCACAATTCCGTTACACCCAACCACCGTCAAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGTACCGAGGAGGAACTCATTGAACTGGGAAAGCCATTTGGAAAAGTCGTGAATACAAAATGTAATGTTGGAGCAAACAGAAATCAAGCTTTTATTGAGTTTGCAGACATAAATCAAGCTATTGCAATGATATCATATTATGCATCTTCCTCTGAGCCTGCTCAAGTTAGAGGAAAAACTGTCTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAATAAAACAACAGCTGATGTTCCTGGAAATGTGCTTTTAGTAACAATTGAGGGCACTGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTTTTTTCTGCCTTTGGATTTGTGCATAAGATTACTACCTTCGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCGGATGCGGAGACTGCCTCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTATTTGCTTCCGGATCATGTTGGACCATGTTCCCTTAGAATCACTTACTCTGCCCATACTGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGTTCACCGTGGGTTTGGATGGAAAGAAACTCGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATATGCAGTCACCTTGGAGGTTTTGCACATGGTTTTTTCTGCATTTGGACCTGTCCAGAAGATTGCCATGTTTGATAAGAATGGGGGAGTCCAGGCCTTGATTCAATATCCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTCGAGGGACACTGTATTTATGACGGAGGGTTTTGCAAGCTTCACATCTCATATTCTCGCCATACTGATTTGAGTATCAAGGTGAATAACGACCGAAGTCGAGACTATACAATTCCAAATAATCCTCCCATGGTGAATTCCCAACCGCCTGTTGTGGGGCAGCAACAACCACATCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAATCAGTATGGTCCTTCCGGAGAGCAGCAGCCTGGGGTGCAGCCTCCACAATCTTCAGGTTGGGGATCGGGCGGTCCTGCTGCGCCCTACTCCTCCATGCCCATGCACAATCCTGGTTACATGCCATCGGGGACAATGCCGCCACAGCATGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCGTATCGCCCCGATCACAGGCAATAGCACGCATTGTCTTCTGTTTTATAGTTGAATGTTCATTCAAGAAAACCAACTAAGCTTTTTAAAGCACTAGAAATGCATTTTGGCAGAGGAAACAAATGTGCATTAAAATTCGATGGTTCCGCGAACTACTCTCACTGTTCAGAACAAATTAGGTCGGTTCATTTCCCTTTTATTTTAAGGGATGTGAATGAATGAATGTAAGATCCCAAGTGTGAAGAACCGAGCACCTTCCTTTGAAGCTAAGTGACGTATTAAACTCGGTTATTATTGATGATCACTGTTTTATAAGTCTTTCTCTTCCTTTTGCCCATTCTTATCACTTCTTGAACTTAATCCTCATTTATGCAATGTACTTTGTTTCAACTGTGGCTAAACTGAGTTGTCTCTCCCCCAGGCTGATGAAACATTGTATTGACGGCACTTTATCTACATCTAAAATTGTGTTTTTTCTT

Coding sequence (CDS)

ATGTTCTCCTGTAAGTTGGGCGAAATGGCATCAGTTTCTAGTCAGCCACAATTCCGTTACACCCAACCACCGTCAAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGTACCGAGGAGGAACTCATTGAACTGGGAAAGCCATTTGGAAAAGTCGTGAATACAAAATGTAATGTTGGAGCAAACAGAAATCAAGCTTTTATTGAGTTTGCAGACATAAATCAAGCTATTGCAATGATATCATATTATGCATCTTCCTCTGAGCCTGCTCAAGTTAGAGGAAAAACTGTCTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAATAAAACAACAGCTGATGTTCCTGGAAATGTGCTTTTAGTAACAATTGAGGGCACTGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTTTTTTCTGCCTTTGGATTTGTGCATAAGATTACTACCTTCGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCGGATGCGGAGACTGCCTCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTATTTGCTTCCGGATCATGTTGGACCATGTTCCCTTAGAATCACTTACTCTGCCCATACTGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGTTCACCGTGGGTTTGGATGGAAAGAAACTCGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATATGCAGTCACCTTGGAGGTTTTGCACATGGTTTTTTCTGCATTTGGACCTGTCCAGAAGATTGCCATGTTTGATAAGAATGGGGGAGTCCAGGCCTTGATTCAATATCCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTCGAGGGACACTGTATTTATGACGGAGGGTTTTGCAAGCTTCACATCTCATATTCTCGCCATACTGATTTGAGTATCAAGGTGAATAACGACCGAAGTCGAGACTATACAATTCCAAATAATCCTCCCATGGTGAATTCCCAACCGCCTGTTGTGGGGCAGCAACAACCACATCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAATCAGTATGGTCCTTCCGGAGAGCAGCAGCCTGGGGTGCAGCCTCCACAATCTTCAGGTTGGGGATCGGGCGGTCCTGCTGCGCCCTACTCCTCCATGCCCATGCACAATCCTGGTTACATGCCATCGGGGACAATGCCGCCACAGCATGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCGTATCGCCCCGATCACAGGCAATAG

Protein sequence

MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ

Homology

[Close]

BLAST of MELO3C005872 vs. NCBI nr
Match: XP_008437579.1 (PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [Cucumis melo])

HSP 1 Score: 912.5 bits (2357), Expect = 1.4e-261
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0


Query: 1   MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 60
           MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG
Sbjct: 298 MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 357

Query: 61  ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 120
           ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV
Sbjct: 358 ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 417

Query: 121 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 180
           LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD
Sbjct: 418 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 477

Query: 181 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 240
           GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV
Sbjct: 478 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 537

Query: 241 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 300
           GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD
Sbjct: 538 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 597

Query: 301 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 360
           VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP
Sbjct: 598 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 657

Query: 361 VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY 420
           VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY
Sbjct: 658 VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY 717

Query: 421 MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 718 MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 750

[Close]

BLAST of MELO3C005872 vs. NCBI nr
Match: KAA0042561.1 (polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 905.2 bits (2338), Expect = 2.3e-259
Identity = 452/457 (98.91%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 60
           +FSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG
Sbjct: 298 VFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 357

Query: 61  ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 120
           ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV
Sbjct: 358 ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 417

Query: 121 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 180
           LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD
Sbjct: 418 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 477

Query: 181 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG---- 240
           GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    
Sbjct: 478 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPL 537

Query: 241 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 300
           QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI
Sbjct: 538 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 597

Query: 301 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVN 360
           QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVN
Sbjct: 598 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVN 657

Query: 361 SQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 420
           SQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH
Sbjct: 658 SQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 717

Query: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 718 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 754

[Close]

BLAST of MELO3C005872 vs. NCBI nr
Match: XP_031741225.1 (polypyrimidine tract-binding protein homolog 2 [Cucumis sativus])

HSP 1 Score: 896.7 bits (2316), Expect = 8.0e-257
Identity = 449/461 (97.40%), Postives = 450/461 (97.61%), Query Frame = 0


Query: 1   MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 60
           +FSCK GEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG
Sbjct: 358 VFSCKFGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 417

Query: 61  ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 120
           ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV
Sbjct: 418 ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 477

Query: 121 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 180
           LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD
Sbjct: 478 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 537

Query: 181 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 240
           GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV
Sbjct: 538 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 597

Query: 241 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 300
           GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD
Sbjct: 598 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 657

Query: 301 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 360
           VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP
Sbjct: 658 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 717

Query: 361 VV--------GQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSS 420
           VV        GQQ PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAA YSS
Sbjct: 718 VVGQGPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSS 777

Query: 421 MPMHNPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           MPMHNPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 778 MPMHNPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 818

[Close]

BLAST of MELO3C005872 vs. NCBI nr
Match: TYK05965.1 (polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 895.6 bits (2313), Expect = 1.8e-256
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 248
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 240

Query: 249 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 308
           PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 309 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 368
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 360

Query: 369 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 428
           QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP
Sbjct: 361 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 420

Query: 429 QHGMMPSPSGLHQTPPPPYRPDHRQ 454
           QHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 QHGMMPSPSGLHQTPPPPYRPDHRQ 445

[Close]

BLAST of MELO3C005872 vs. NCBI nr
Match: KAE8647805.1 (hypothetical protein Csa_000640 [Cucumis sativus])

HSP 1 Score: 877.1 bits (2265), Expect = 6.6e-251
Identity = 443/457 (96.94%), Postives = 443/457 (96.94%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 248
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSSLQFTVGLDG 240

Query: 249 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 308
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 309 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV-- 368
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV  
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360

Query: 369 ------GQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 428
                 GQQ PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAA YSSMPMH
Sbjct: 361 GPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH 420

Query: 429 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 457

[Close]

BLAST of MELO3C005872 vs. ExPASy Swiss-Prot
Match: Q9FGL9 (Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g53180 PE=1 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 2.2e-185
Identity = 348/434 (80.18%), Postives = 366/434 (84.33%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 248
           L + VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG+DGKK+E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 249 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 308
           PESNVLLASIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 309 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQP---PVVGQQ 368
           EALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNP 360

Query: 369 QPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGP---AAPYSSMPMHNPGYMP 428
           Q +   G S HQ      G  G  QPG Q   S G G GG     AP SS  MH     P
Sbjct: 361 QQYHAAGGSHHQQQQQPQG--GWVQPGGQ--GSMGMGGGGHNHYMAPPSSSSMHQG---P 420

Query: 429 SGTMPPQHGMMPSP 437
            G MPPQH   P P
Sbjct: 421 GGHMPPQHYGGPGP 427

[Close]

BLAST of MELO3C005872 vs. ExPASy Swiss-Prot
Match: Q9MAC5 (Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PTB PE=1 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 7.3e-152
Identity = 280/421 (66.51%), Postives = 327/421 (77.67%), Query Frame = 0


Query: 11  SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 70
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 71  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 130
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 131 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 190
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 191 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPE 250
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 251 SNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEA 310
           SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 311 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPHQM 370
           LEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V    P   
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP--- 361

Query: 371 MGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPPQH 430
                         P+G Q P  Q  Q SG+G     +PY        G  PSG  PP +
Sbjct: 362 --------------PAGWQNPQAQ-SQYSGYG----GSPYMYPSSDPNGASPSG-QPPYY 399

Query: 431 G 432
           G
Sbjct: 422 G 399

[Close]

BLAST of MELO3C005872 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-35
Identity = 113/354 (31.92%), Postives = 189/354 (53.39%), Query Frame = 0


Query: 25  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYA 84
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 85  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 144
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 145 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 204
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 205 TYSAHTDLTVKFQSHRSRDYTNPYLPVA----------------------PSAIDGS--G 264
            +S   +L V + + RSRDYTNP LP                         SAI  +  G
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 244

Query: 265 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 324
               G+ G        VL++++     ++  + L  +FS +G + +I +  +N    AL+
Sbjct: 245 GLPPGITG--TNDRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALV 304

Query: 325 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN 351
           Q  D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N
Sbjct: 305 QMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSN 335

[Close]

BLAST of MELO3C005872 vs. ExPASy Swiss-Prot
Match: Q9UKA9 (Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-33
Identity = 123/395 (31.14%), Postives = 183/395 (46.33%), Query Frame = 0


Query: 24  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 83
           PS+VLH+R LP E TE E+I LG PFGKV N     G  +NQAF+E A    AI M++YY
Sbjct: 57  PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG--KNQAFLELATEEAAITMVNYY 116

Query: 84  ASSSEPAQVRGKTVYLQYSNRQEIVNNKT----------------TADVP---------- 143
             S+    +R + +Y+QYSN +E+  + T                TA+ P          
Sbjct: 117 --SAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESA 176

Query: 144 -----GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETA 203
                  VL + I+      V++DVLH +FS FG V KI TF K   FQAL+Q+ D   A
Sbjct: 177 VTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNA 236

Query: 204 SSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLP------ 263
             AK ALDG++I       +   C+LRI +S   +L VK+ + +SRDYT P LP      
Sbjct: 237 QQAKLALDGQNI-------YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQP 296

Query: 264 ----------------------VAPSAIDGSGQFT-------VGLDGKKLEPESNVLLAS 323
                                 ++P AI  +           VG+ G      + +L+++
Sbjct: 297 ALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSN 356

Query: 324 IENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIY 353
           +   +  VT + L  +F  +G VQ++ +   N    ALIQ  D   + +A   L G  +Y
Sbjct: 357 LN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY 416

[Close]

BLAST of MELO3C005872 vs. ExPASy Swiss-Prot
Match: Q91Z31 (Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-33
Identity = 123/395 (31.14%), Postives = 183/395 (46.33%), Query Frame = 0


Query: 24  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 83
           PS+VLH+R LP E TE E+I LG PFGKV N     G  +NQAF+E A    AI M++YY
Sbjct: 57  PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG--KNQAFLELATEEAAITMVNYY 116

Query: 84  ASSSEPAQVRGKTVYLQYSNRQEIVNNKT----------------TADVP---------- 143
             S+    +R + +Y+QYSN +E+  + T                TA+ P          
Sbjct: 117 --SAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESA 176

Query: 144 -----GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETA 203
                  VL + I+      V++DVLH +FS FG V KI TF K   FQAL+Q+ D   A
Sbjct: 177 VTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNA 236

Query: 204 SSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLP------ 263
             AK ALDG++I       +   C+LRI +S   +L VK+ + +SRDYT P LP      
Sbjct: 237 QQAKLALDGQNI-------YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQP 296

Query: 264 ----------------------VAPSAIDGSGQFT-------VGLDGKKLEPESNVLLAS 323
                                 ++P AI  +           VG+ G      + +L+++
Sbjct: 297 ALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSN 356

Query: 324 IENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIY 353
           +   +  VT + L  +F  +G VQ++ +   N    ALIQ  D   + +A   L G  +Y
Sbjct: 357 LN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY 416

[Close]

BLAST of MELO3C005872 vs. ExPASy TrEMBL
Match: A0A1S3AUZ4 (LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis melo OX=3656 GN=LOC103482951 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 6.9e-262
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0


Query: 1   MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 60
           MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG
Sbjct: 298 MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 357

Query: 61  ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 120
           ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV
Sbjct: 358 ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 417

Query: 121 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 180
           LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD
Sbjct: 418 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 477

Query: 181 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 240
           GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV
Sbjct: 478 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 537

Query: 241 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 300
           GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD
Sbjct: 538 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 597

Query: 301 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 360
           VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP
Sbjct: 598 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 657

Query: 361 VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY 420
           VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY
Sbjct: 658 VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY 717

Query: 421 MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 718 MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 750

[Close]

BLAST of MELO3C005872 vs. ExPASy TrEMBL
Match: A0A5A7TLW2 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00560 PE=4 SV=1)

HSP 1 Score: 905.2 bits (2338), Expect = 1.1e-259
Identity = 452/457 (98.91%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 60
           +FSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG
Sbjct: 298 VFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 357

Query: 61  ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 120
           ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV
Sbjct: 358 ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 417

Query: 121 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 180
           LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD
Sbjct: 418 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 477

Query: 181 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG---- 240
           GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    
Sbjct: 478 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPL 537

Query: 241 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 300
           QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI
Sbjct: 538 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 597

Query: 301 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVN 360
           QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVN
Sbjct: 598 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVN 657

Query: 361 SQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 420
           SQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH
Sbjct: 658 SQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 717

Query: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 718 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 754

[Close]

BLAST of MELO3C005872 vs. ExPASy TrEMBL
Match: A0A5D3C3L0 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00590 PE=4 SV=1)

HSP 1 Score: 895.6 bits (2313), Expect = 8.7e-257
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 248
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 240

Query: 249 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 308
           PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 309 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 368
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 360

Query: 369 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 428
           QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP
Sbjct: 361 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 420

Query: 429 QHGMMPSPSGLHQTPPPPYRPDHRQ 454
           QHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 QHGMMPSPSGLHQTPPPPYRPDHRQ 445

[Close]

BLAST of MELO3C005872 vs. ExPASy TrEMBL
Match: A0A0A0KLY8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139570 PE=4 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 5.8e-253
Identity = 443/453 (97.79%), Postives = 443/453 (97.79%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 248
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 240

Query: 249 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 308
           PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 309 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV------ 368
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV      
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQ 360

Query: 369 --GQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGY 428
             GQQ PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAA YSSMPMHNPGY
Sbjct: 361 GQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMHNPGY 420

Query: 429 MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 454
           MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 453

[Close]

BLAST of MELO3C005872 vs. ExPASy TrEMBL
Match: A0A6J1I7L3 (polypyrimidine tract-binding protein homolog 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471547 PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 1.9e-240
Identity = 430/447 (96.20%), Postives = 432/447 (96.64%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 248
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 249 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 308
           PESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 309 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 368
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN P MVNSQPPVVG QQP 
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVG-QQPG 360

Query: 369 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 428
           QMMGPSTHQYNGNQY PS E QPGVQP  SSGWGSGGPAAPY SMPMHNP YM SGTMPP
Sbjct: 361 QMMGPSTHQYNGNQYSPSAE-QPGVQPQPSSGWGSGGPAAPY-SMPMHNPAYMSSGTMPP 420

Query: 429 Q--HGMMPSPSGLHQTPPPPYRPDHRQ 454
           Q   GMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 QMAPGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of MELO3C005872 vs. TAIR 10
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 649.8 bits (1675), Expect = 1.6e-186
Identity = 348/434 (80.18%), Postives = 366/434 (84.33%), Query Frame = 0


Query: 9   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 68
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 69  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 128
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 129 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 188
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 189 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 248
           L + VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG+DGKK+E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 249 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 308
           PESNVLLASIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 309 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQP---PVVGQQ 368
           EALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNP 360

Query: 369 QPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGP---AAPYSSMPMHNPGYMP 428
           Q +   G S HQ      G  G  QPG Q   S G G GG     AP SS  MH     P
Sbjct: 361 QQYHAAGGSHHQQQQQPQG--GWVQPGGQ--GSMGMGGGGHNHYMAPPSSSSMHQG---P 420

Query: 429 SGTMPPQHGMMPSP 437
            G MPPQH   P P
Sbjct: 421 GGHMPPQHYGGPGP 427

[Close]

BLAST of MELO3C005872 vs. TAIR 10
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 538.5 bits (1386), Expect = 5.2e-153
Identity = 280/421 (66.51%), Postives = 327/421 (77.67%), Query Frame = 0


Query: 11  SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 70
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 71  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 130
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 131 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 190
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 191 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPE 250
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 251 SNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEA 310
           SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 311 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPHQM 370
           LEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V    P   
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP--- 361

Query: 371 MGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPPQH 430
                         P+G Q P  Q  Q SG+G     +PY        G  PSG  PP +
Sbjct: 362 --------------PAGWQNPQAQ-SQYSGYG----GSPYMYPSSDPNGASPSG-QPPYY 399

Query: 431 G 432
           G
Sbjct: 422 G 399

[Close]

BLAST of MELO3C005872 vs. TAIR 10
Match: AT3G01150.2 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 474.9 bits (1221), Expect = 7.0e-134
Identity = 254/421 (60.33%), Postives = 301/421 (71.50%), Query Frame = 0


Query: 11  SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 70
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 71  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 130
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 131 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 190
                                         +ALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 H-----------------------------EALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 191 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPE 250
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 251 SNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEA 310
           SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 311 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPHQM 370
           LEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V    P   
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP--- 361

Query: 371 MGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPPQH 430
                         P+G Q P  Q  Q SG+G     +PY        G  PSG  PP +
Sbjct: 362 --------------PAGWQNPQAQ-SQYSGYG----GSPYMYPSSDPNGASPSG-QPPYY 370

Query: 431 G 432
           G
Sbjct: 422 G 370

[Close]

BLAST of MELO3C005872 vs. TAIR 10
Match: AT5G53180.2 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 404.8 bits (1039), Expect = 8.9e-113
Identity = 224/302 (74.17%), Postives = 239/302 (79.14%), Query Frame = 0


Query: 141 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 200
           VFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYLL + VG CSL+I
Sbjct: 33  VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92

Query: 201 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPESNVLLASIEN 260
           TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG+DGKK+EPESNVLLASIEN
Sbjct: 93  TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 152

Query: 261 MQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGG 320
           MQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAKEALEGHCIYDGG
Sbjct: 153 MQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG 212

Query: 321 FCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQP---PVVGQQQPHQMMGPSTHQ 380
           FCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  Q +   G S HQ
Sbjct: 213 FCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNPQQYHAAGGSHHQ 272

Query: 381 YNGNQYGPSGEQQPGVQPPQSSGWGSGGP---AAPYSSMPMHNPGYMPSGTMPPQHGMMP 437
                 G  G  QPG Q   S G G GG     AP SS  MH     P G MPPQH   P
Sbjct: 273 QQQQPQG--GWVQPGGQ--GSMGMGGGGHNHYMAPPSSSSMHQG---PGGHMPPQHYGGP 327

[Close]

BLAST of MELO3C005872 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-36
Identity = 113/354 (31.92%), Postives = 189/354 (53.39%), Query Frame = 0


Query: 25  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYA 84
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 85  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 144
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 145 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 204
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 205 TYSAHTDLTVKFQSHRSRDYTNPYLPVA----------------------PSAIDGS--G 264
            +S   +L V + + RSRDYTNP LP                         SAI  +  G
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 244

Query: 265 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 324
               G+ G        VL++++     ++  + L  +FS +G + +I +  +N    AL+
Sbjct: 245 GLPPGITG--TNDRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALV 304

Query: 325 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN 351
           Q  D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N
Sbjct: 305 QMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSN 335

The following BLAST results are available for this feature:

BLAST of MELO3C005872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437579.1	1.4e-261	100.00	PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [...	[more]
KAA0042561.1	2.3e-259	98.91	polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_031741225.1	8.0e-257	97.40	polypyrimidine tract-binding protein homolog 2 [Cucumis sativus]	[more]
TYK05965.1	1.8e-256	100.00	polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa]	[more]
KAE8647805.1	6.6e-251	96.94	hypothetical protein Csa_000640 [Cucumis sativus]	[more]

BLAST of MELO3C005872 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL9	2.2e-185	80.18	Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9MAC5	7.3e-152	66.51	Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q6ICX4	3.3e-35	31.92	Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9UKA9	1.8e-33	31.14	Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=...	[more]
Q91Z31	1.8e-33	31.14	Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV...	[more]

BLAST of MELO3C005872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUZ4	6.9e-262	100.00	LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis m...	[more]
A0A5A7TLW2	1.1e-259	98.91	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3C3L0	8.7e-257	100.00	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A0A0KLY8	5.8e-253	97.79	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139570 PE=4 SV...	[more]
A0A6J1I7L3	1.9e-240	96.20	polypyrimidine tract-binding protein homolog 2-like isoform X2 OS=Cucurbita maxi...	[more]

BLAST of MELO3C005872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53180.1	1.6e-186	80.18	polypyrimidine tract-binding protein 2	[more]
AT3G01150.1	5.2e-153	66.51	polypyrimidine tract-binding protein 1	[more]
AT3G01150.2	7.0e-134	60.33	polypyrimidine tract-binding protein 1	[more]
AT5G53180.2	8.9e-113	74.17	polypyrimidine tract-binding protein 2	[more]
AT1G43190.1	2.3e-36	31.92	polypyrimidine tract-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 27..100 e-value: 1.3E-9 score: 47.9 coord: 255..325 e-value: 0.16 score: 13.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 30..81 e-value: 4.8E-8 score: 32.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 26..104 score: 11.946341
IPR021790	PTBP1, RNA recognition motif 2-like	PFAM	PF11835	RRM_8	coord: 251..329 e-value: 1.9E-8 score: 34.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 118..229 e-value: 7.9E-33 score: 114.7 coord: 250..354 e-value: 2.9E-36 score: 125.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 13..117 e-value: 8.7E-26 score: 92.2
None	No IPR available	PFAM	PF13893	RRM_5	coord: 117..184 e-value: 0.0058 score: 16.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..405
None	No IPR available	PANTHER	PTHR15592	MATRIN 3/NUCLEAR PROTEIN 220-RELATED	coord: 9..442
None	No IPR available	PANTHER	PTHR15592:SF29	POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 2	coord: 9..442
IPR034793	PTBPH1/PTBPH2, RNA recognition motif 2	CDD	cd12691	RRM2_PTBPH1_PTBPH2	coord: 118..212 e-value: 1.01869E-60 score: 191.213
IPR034794	PTBPH1/PTBPH2, RNA recognition motif 3	CDD	cd12690	RRM3_PTBPH1_PTBPH2	coord: 251..347 e-value: 3.32425E-67 score: 207.79
IPR034792	PTBPH1/PTBPH2, RNA recognition motif 1	CDD	cd12686	RRM1_PTBPH1_PTBPH2	coord: 24..104 e-value: 6.77858E-57 score: 180.909
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 14..109
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 257..352
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 133..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005872.1	MELO3C005872.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding