Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGAGGTTCCAAGAGCTGAAGAGGAAATTTGATAGGCTGAAACCTCTTGCTGAAAAGCAAGAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACGTGACTATTGCTTGCCTTATATGGAACCGCCTGTTCGTCGTTGGTATGTATCACATTTCTTCCTCCCTCTCCCTCCTCAATTGCACTCATCATTTGTGGATGGTTTTAGGCTTCAGCCTTGCCTCTACTTCTCTCTACCTTTTGTTTTTCCTTGAGGCTGCTTTCATGTTGTATCGGGCTCAAAATCAATTGGATATTATTTGCAAGCAACAGAATGAAATCTCCCAACAGATTTTGAATACTGGAAACCCAGATGATTATGAGGGTGGAGATTCAATTTCAAGTGATAATGGGTGGTTGGAGTTGAGTTTCGAGGTGCAGTTACTTCATGAGTACCACCGGGCCATTATTTACACTTGTCCAGAGAAAATTTTATATTGCTTCCACTATATCTACTCTACTTGCTGTTGCTGCTTTTGA
mRNA sequence
ATGGCCATGAGGTTCCAAGAGCTGAAGAGGAAATTTGATAGGCTGAAACCTCTTGCTGAAAAGCAAGAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACGTGACTATTGCTTGCCTTATATGGAACCGCCTGTTCGTCGTTGGTATGTATCACATTTCTTCCTCCCTCTCCCTCCTCAATTGCACTCATCATTTGTGGATGGTTTTAGGCTTCAGCCTTGCCTCTACTTCTCTCTACCTTTTGTTTTTCCTTGAGGCTGCTTTCATGTTGTATCGGGCTCAAAATCAATTGGATATTATTTGCAAGCAACAGAATGAAATCTCCCAACAGATTTTGAATACTGGAAACCCAGATGATTATGAGGGTGGAGATTCAATTTCAAGTGATAATGGGTGGTTGGAGTTGAGTTTCGAGGTGCAGTTACTTCATGAGTACCACCGGGCCATTATTTACACTTGTCCAGAGAAAATTTTATATTGCTTCCACTATATCTACTCTACTTGCTGTTGCTGCTTTTGA
Coding sequence (CDS)
ATGGCCATGAGGTTCCAAGAGCTGAAGAGGAAATTTGATAGGCTGAAACCTCTTGCTGAAAAGCAAGAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACGTGACTATTGCTTGCCTTATATGGAACCGCCTGTTCGTCGTTGGTATGTATCACATTTCTTCCTCCCTCTCCCTCCTCAATTGCACTCATCATTTGTGGATGGTTTTAGGCTTCAGCCTTGCCTCTACTTCTCTCTACCTTTTGTTTTTCCTTGAGGCTGCTTTCATGTTGTATCGGGCTCAAAATCAATTGGATATTATTTGCAAGCAACAGAATGAAATCTCCCAACAGATTTTGAATACTGGAAACCCAGATGATTATGAGGGTGGAGATTCAATTTCAAGTGATAATGGGTGGTTGGAGTTGAGTTTCGAGGTGCAGTTACTTCATGAGTACCACCGGGCCATTATTTACACTTGTCCAGAGAAAATTTTATATTGCTTCCACTATATCTACTCTACTTGCTGTTGCTGCTTTTGA
Protein sequence
MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSLLNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPDDYEGGDSISSDNGWLELSFEVQLLHEYHRAIIYTCPEKILYCFHYIYSTCCCCF
Homology
BLAST of MELO3C005854 vs. NCBI nr
Match:
KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 287.7 bits (735), Expect = 6.6e-74
Identity = 151/169 (89.35%), Postives = 153/169 (90.53%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIW RLFVVGMYHISSSLSL
Sbjct: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII KQQNEISQQILNTGNPD
Sbjct: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPD 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRAIIYTCPEKILYCFHYIYST 170
DYEGGDSISSDNGWLELSFEVQLLHEYHR + K+ YI ST
Sbjct: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKV-----YIAST 164
BLAST of MELO3C005854 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 123/148 (83.11%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYH 149
D E GD+ SSDNG LELSF+VQLL +YH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH 147
BLAST of MELO3C005854 vs. NCBI nr
Match:
KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM LKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYH 149
D E GD+ SSDNG LELSF+VQLL +YH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH 147
BLAST of MELO3C005854 vs. NCBI nr
Match:
XP_008437551.1 (PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo])
HSP 1 Score: 222.6 bits (566), Expect = 2.6e-54
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLH 146
D E GD+ SSDNG LELSF+ +LH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQEWMLH 145
BLAST of MELO3C005854 vs. NCBI nr
Match:
XP_011654636.1 (uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetical protein Csa_000251 [Cucumis sativus])
HSP 1 Score: 222.2 bits (565), Expect = 3.4e-54
Identity = 117/145 (80.69%), Postives = 125/145 (86.21%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM F ELKRKFD LK LAEKQEQRVRYYETRAQN+ IA LIW+RLF VGMYH SSSLSL
Sbjct: 1 MAMEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMV F L+STSLY LFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLH 146
D E GDSISSDNGWLELSF+ +LH
Sbjct: 121 DDEAGDSISSDNGWLELSFQEWMLH 145
BLAST of MELO3C005854 vs. ExPASy TrEMBL
Match:
A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)
HSP 1 Score: 287.7 bits (735), Expect = 3.2e-74
Identity = 151/169 (89.35%), Postives = 153/169 (90.53%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIW RLFVVGMYHISSSLSL
Sbjct: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII KQQNEISQQILNTGNPD
Sbjct: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPD 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRAIIYTCPEKILYCFHYIYST 170
DYEGGDSISSDNGWLELSFEVQLLHEYHR + K+ YI ST
Sbjct: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKV-----YIAST 164
BLAST of MELO3C005854 vs. ExPASy TrEMBL
Match:
E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 5.1e-56
Identity = 123/148 (83.11%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYH 149
D E GD+ SSDNG LELSF+VQLL +YH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH 147
BLAST of MELO3C005854 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 225.7 bits (574), Expect = 1.5e-55
Identity = 121/148 (81.76%), Postives = 128/148 (86.49%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM F ELKRKFD LK LAEKQEQRVRYYETRAQN+ IA LIW+RLF VGMYH SSSLSL
Sbjct: 1 MAMEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMV F L+STSLY LFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYH 149
D E GDSISSDNGWLELSF+VQLL YH
Sbjct: 121 DDEAGDSISSDNGWLELSFQVQLL-PYH 147
BLAST of MELO3C005854 vs. ExPASy TrEMBL
Match:
A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 5.6e-55
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM LKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYH 149
D E GD+ SSDNG LELSF+VQLL +YH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH 147
BLAST of MELO3C005854 vs. ExPASy TrEMBL
Match:
A0A1S3ATY9 (uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=4 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLH 146
D E GD+ SSDNG LELSF+ +LH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQEWMLH 145
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0042578.1 | 6.6e-74 | 89.35 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
| ADN33782.1 | 1.1e-55 | 83.11 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| KAA0042580.1 | 1.2e-54 | 82.43 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
| XP_008437551.1 | 2.6e-54 | 82.07 | PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo] | [more] |
| XP_011654636.1 | 3.4e-54 | 80.69 | uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetica... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C430 | 3.2e-74 | 89.35 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
| E5GBE1 | 5.1e-56 | 83.11 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A0A0KM15 | 1.5e-55 | 81.76 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
| A0A5A7TGW8 | 5.6e-55 | 82.43 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
| A0A1S3ATY9 | 1.3e-54 | 82.07 | uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
