MELO3C005839 (gene) Melon (DHL92) v4

Overview


Name	MELO3C005839
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pectin lyase-like superfamily protein
Location	chr09: 23381564 .. 23383919 (+)
RNA-Seq Expression	MELO3C005839
Synteny	MELO3C005839

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGATTTATTTTCCATTTTCAGTTCCTAATTTCTCCTATAAAATCCTTCCTCTCTAATCCAAAACATATTCATCATATCAAATCTTTTTAATTTTCTTTCTCATCAATCCATGGATCTTCCTCAAAAACCCACAAAAACTCATGTAATGTTCTTTCTCTTTTTCATTTCTCTTTCATTTTGTTTCACTCGTTTCTCATTTTAATCATTGAACGTGTGATTAGTGGGTTTTTCTTCAATTTCCTCAAGAACAATTCTTTCTTTCTTTAGATCGTTCGAAAATGCATCCGATGGAAAGATGAAAAGGAACCCAAAAATCGTTTTTTTTTCTCTTCGTTCGATTATTTCGAGAAACAAACACATGTTGAATGATCAATTTTCTTTTTACGGCAGGATGCGGCGGCGAGAATTTCGGCCGTCATTCTACTGGCATTGGTGAGTTTAGCCACCGTAGAAGGTAAACGGCAATGCCCGACAAATTACTTACAAGTTCCGGCGATCAATTGCCGACAACACACGGCGGTACTTACGGACTTCGGCGGCGTCGGCGACGGAGTAACTTCAAATACTCAGGCGTTCCGGCGAGCGATTGAACATCTCAGCCCACTGGCAGCGAACGGTGGTGCTCAGTTGATTGTGCCGCCGGGAAAATGGCTGACCGGAAGCTTTAATCTGACCAGCCATTTCACACTCTTTGTCCATAAAGATGCAACAATCCTTGCTTCCCAGGTTTGACCTTCAAACAATATATATGGAAATGCATTTGTTTCATTTCTATATGTATATATGGAAATGTAATCTGTCACATGTGGGGTTTTCTTACTAAAAAAGAGTCGAAATGTTAATCATGGTTTTTGGATTAATTTGATATTAAATATATATGGATCTTAGTATATAGTTTGGATTCAAAAAGGTGATTTTGGAACAAACAGAAAGTGGAAAAAACATATAAGGAATTGTTTAACAAAGCAAAACTATATATTTATGTGTGTTTGCATAATCCAATGGTGTAGGATGAATCGGAATGGCCACAAGTCGCAATTCTGCCATCTTATGGGGTAGGAAGAGATGCTCCTGGTGGAAGATACAGCAGTCTCATCTATGGAACCAATCTCACTGACGTCGTCATCACCGGTAACAACGGTACGATTGACGGCCAAGGATCTTATTGGTGGGATAAGTTCCACAAAGGCGAGCTTAATTTGACACGGCCATACATGATTGAGATTCTGTATTCCGATCAAATTCAGATTTCTAATCTAACTTTGGTCAACTCTCCCTCGTGGTTTGTCCATCCCATCTACAGTAAGAATGTGATTATCCAAGGTCTCACCATTCTTGCTCCCATCGACTCTCCCAACACCGACGGAATCGACCCAGGTTTCCTATTTCAAATCCTTCAAATGGGTTAAGGCTTTTCTTCTTCGTCATTCCCTTCTCCCTAATTCTTCTTTGCATTATTTCACAGATTCCTGCTCCAACATTCGTATCGAAGACTGCTTCATTGTCTCCGGCGACGACTGCATCGCCGTCAAGAGCGGATGGGACCAGTACGGTATCAAATTCGGAATGCCAACTGAAGACCTCGTCATTCGCCGTCTCACCTGCATTTCCCCGGATTCCGCTGGCATCGCTCTCGGCAGTGAAATGTCCGGCGGTATCCGCAACGTCAGAATCGAAAACGTGACGGGAATCAATACACAATCTGCTGTGAGAATTAAAACCGCTCGTGGACGTGGGGGTTTTGTGAAGGATATTTTCGTCCGTGGAATGTATCTATCGACGATGAAATACGTGTTCTGGATGACCGGAAACTATAAATCGCATCCTGATGAGAAGTTCGATCCCGCGGCGTTGCCGGAGATTACGAACATTAATTACAGAGATGTGGTGGCGGAGAATGTTACTTACTCGGCGAGATTGGAAGGGATTTCGGGAGATCCGTTCACCAATATTTGTATTTCGAATGTTAAGATTGGACTGACGGCGAAGCCTAAGAAGTTGCAGTGGAACTGTACGGATGTTGAGGGAATCAGTAGCGATGTGGTGCCGCCGCCATGTGCTCCTCTGGCGAAGGCGGCGAAAAGCGGCGGATGTGACTTTCCTGCGGATCAACTTCCGATTGAGAAGGTTCAGTTGAAGACTTGCTTTGTTCAAAATCCCACCGTCGATTGAAGCCTTTGATTTTTTTTTTTTTTCTTTTTTCCTTCTATGGAATAAATAGTGCTTTGGATTTTATTGTCCATCCAAAAATGAAATGATAGATACAATATTATATACTAATTCCAAAAAGCTTTGTTTGAAATGTTTATGATTATTTAGTATCAATGTTAAACTTCTCTACAAAAGTTTACTG

mRNA sequence

TTTCGATTTATTTTCCATTTTCAGTTCCTAATTTCTCCTATAAAATCCTTCCTCTCTAATCCAAAACATATTCATCATATCAAATCTTTTTAATTTTCTTTCTCATCAATCCATGGATCTTCCTCAAAAACCCACAAAAACTCATGATGCGGCGGCGAGAATTTCGGCCGTCATTCTACTGGCATTGGTGAGTTTAGCCACCGTAGAAGGTAAACGGCAATGCCCGACAAATTACTTACAAGTTCCGGCGATCAATTGCCGACAACACACGGCGGTACTTACGGACTTCGGCGGCGTCGGCGACGGAGTAACTTCAAATACTCAGGCGTTCCGGCGAGCGATTGAACATCTCAGCCCACTGGCAGCGAACGGTGGTGCTCAGTTGATTGTGCCGCCGGGAAAATGGCTGACCGGAAGCTTTAATCTGACCAGCCATTTCACACTCTTTGTCCATAAAGATGCAACAATCCTTGCTTCCCAGGATGAATCGGAATGGCCACAAGTCGCAATTCTGCCATCTTATGGGGTAGGAAGAGATGCTCCTGGTGGAAGATACAGCAGTCTCATCTATGGAACCAATCTCACTGACGTCGTCATCACCGGTAACAACGGTACGATTGACGGCCAAGGATCTTATTGGTGGGATAAGTTCCACAAAGGCGAGCTTAATTTGACACGGCCATACATGATTGAGATTCTGTATTCCGATCAAATTCAGATTTCTAATCTAACTTTGGTCAACTCTCCCTCGTGGTTTGTCCATCCCATCTACAGTAAGAATGTGATTATCCAAGGTCTCACCATTCTTGCTCCCATCGACTCTCCCAACACCGACGGAATCGACCCAGATTCCTGCTCCAACATTCGTATCGAAGACTGCTTCATTGTCTCCGGCGACGACTGCATCGCCGTCAAGAGCGGATGGGACCAGTACGGTATCAAATTCGGAATGCCAACTGAAGACCTCGTCATTCGCCGTCTCACCTGCATTTCCCCGGATTCCGCTGGCATCGCTCTCGGCAGTGAAATGTCCGGCGGTATCCGCAACGTCAGAATCGAAAACGTGACGGGAATCAATACACAATCTGCTGTGAGAATTAAAACCGCTCGTGGACGTGGGGGTTTTGTGAAGGATATTTTCGTCCGTGGAATGTATCTATCGACGATGAAATACGTGTTCTGGATGACCGGAAACTATAAATCGCATCCTGATGAGAAGTTCGATCCCGCGGCGTTGCCGGAGATTACGAACATTAATTACAGAGATGTGGTGGCGGAGAATGTTACTTACTCGGCGAGATTGGAAGGGATTTCGGGAGATCCGTTCACCAATATTTGTATTTCGAATGTTAAGATTGGACTGACGGCGAAGCCTAAGAAGTTGCAGTGGAACTGTACGGATGTTGAGGGAATCAGTAGCGATGTGGTGCCGCCGCCATGTGCTCCTCTGGCGAAGGCGGCGAAAAGCGGCGGATGTGACTTTCCTGCGGATCAACTTCCGATTGAGAAGGTTCAGTTGAAGACTTGCTTTGTTCAAAATCCCACCGTCGATTGAAGCCTTTGATTTTTTTTTTTTTTCTTTTTTCCTTCTATGGAATAAATAGTGCTTTGGATTTTATTGTCCATCCAAAAATGAAATGATAGATACAATATTATATACTAATTCCAAAAAGCTTTGTTTGAAATGTTTATGATTATTTAGTATCAATGTTAAACTTCTCTACAAAAGTTTACTG

Coding sequence (CDS)

ATGGATCTTCCTCAAAAACCCACAAAAACTCATGATGCGGCGGCGAGAATTTCGGCCGTCATTCTACTGGCATTGGTGAGTTTAGCCACCGTAGAAGGTAAACGGCAATGCCCGACAAATTACTTACAAGTTCCGGCGATCAATTGCCGACAACACACGGCGGTACTTACGGACTTCGGCGGCGTCGGCGACGGAGTAACTTCAAATACTCAGGCGTTCCGGCGAGCGATTGAACATCTCAGCCCACTGGCAGCGAACGGTGGTGCTCAGTTGATTGTGCCGCCGGGAAAATGGCTGACCGGAAGCTTTAATCTGACCAGCCATTTCACACTCTTTGTCCATAAAGATGCAACAATCCTTGCTTCCCAGGATGAATCGGAATGGCCACAAGTCGCAATTCTGCCATCTTATGGGGTAGGAAGAGATGCTCCTGGTGGAAGATACAGCAGTCTCATCTATGGAACCAATCTCACTGACGTCGTCATCACCGGTAACAACGGTACGATTGACGGCCAAGGATCTTATTGGTGGGATAAGTTCCACAAAGGCGAGCTTAATTTGACACGGCCATACATGATTGAGATTCTGTATTCCGATCAAATTCAGATTTCTAATCTAACTTTGGTCAACTCTCCCTCGTGGTTTGTCCATCCCATCTACAGTAAGAATGTGATTATCCAAGGTCTCACCATTCTTGCTCCCATCGACTCTCCCAACACCGACGGAATCGACCCAGATTCCTGCTCCAACATTCGTATCGAAGACTGCTTCATTGTCTCCGGCGACGACTGCATCGCCGTCAAGAGCGGATGGGACCAGTACGGTATCAAATTCGGAATGCCAACTGAAGACCTCGTCATTCGCCGTCTCACCTGCATTTCCCCGGATTCCGCTGGCATCGCTCTCGGCAGTGAAATGTCCGGCGGTATCCGCAACGTCAGAATCGAAAACGTGACGGGAATCAATACACAATCTGCTGTGAGAATTAAAACCGCTCGTGGACGTGGGGGTTTTGTGAAGGATATTTTCGTCCGTGGAATGTATCTATCGACGATGAAATACGTGTTCTGGATGACCGGAAACTATAAATCGCATCCTGATGAGAAGTTCGATCCCGCGGCGTTGCCGGAGATTACGAACATTAATTACAGAGATGTGGTGGCGGAGAATGTTACTTACTCGGCGAGATTGGAAGGGATTTCGGGAGATCCGTTCACCAATATTTGTATTTCGAATGTTAAGATTGGACTGACGGCGAAGCCTAAGAAGTTGCAGTGGAACTGTACGGATGTTGAGGGAATCAGTAGCGATGTGGTGCCGCCGCCATGTGCTCCTCTGGCGAAGGCGGCGAAAAGCGGCGGATGTGACTTTCCTGCGGATCAACTTCCGATTGAGAAGGTTCAGTTGAAGACTTGCTTTGTTCAAAATCCCACCGTCGATTGA

Protein sequence

MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD

Homology

[Close]

BLAST of MELO3C005839 vs. NCBI nr
Match: XP_008437531.1 (PREDICTED: probable polygalacturonase [Cucumis melo] >KAA0042595.1 putative polygalacturonase [Cucumis melo var. makuwa] >TYK05998.1 putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 991.9 bits (2563), Expect = 1.9e-285
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60
           MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG
Sbjct: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60

Query: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120
           GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL
Sbjct: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120

Query: 121 ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF 180
           ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF
Sbjct: 121 ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF 180

Query: 181 HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT 240
           HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT
Sbjct: 181 HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT 240

Query: 241 DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI 300
           DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI
Sbjct: 241 DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI 300

Query: 301 ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG 360
           ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG
Sbjct: 301 ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG 360

Query: 361 NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK 420
           NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK
Sbjct: 361 NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK 420

Query: 421 PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD 480
           PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD
Sbjct: 421 PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD 480

[Close]

BLAST of MELO3C005839 vs. NCBI nr
Match: XP_011654644.1 (probable polygalacturonase [Cucumis sativus] >KGN49922.1 hypothetical protein Csa_000303 [Cucumis sativus])

HSP 1 Score: 935.3 bits (2416), Expect = 2.2e-268
Identity = 449/481 (93.35%), Postives = 466/481 (96.88%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60
           M LPQ PTKTHDAAARISAVILLAL+SLATVEGKR CPTNYLQVPAI+CR+HTA++TDFG
Sbjct: 1   MYLPQDPTKTHDAAARISAVILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFG 60

Query: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120
           GVGDGVTSNTQAFRRAIEHLS LAA+GGAQL VPPGKWLTGSFNLTSHFTLFVHKDA IL
Sbjct: 61  GVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKIL 120

Query: 121 ASQ--DESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWD 180
            SQ  +ESEWPQVA+LPSYGVGRDAPGGRYSSLI+GTNLTDVVITGNNGTIDGQG+YWWD
Sbjct: 121 GSQVENESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWD 180

Query: 181 KFHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSP 240
           KFHKGELNLTRPY+IEI+YSDQIQIS+LTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSP
Sbjct: 181 KFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSP 240

Query: 241 NTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSA 300
           NTDGIDPDSCSN RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVI+RLTCISPDSA
Sbjct: 241 NTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSA 300

Query: 301 GIALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWM 360
           G+ALGSEMSGGIRNVRIEN TGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWM
Sbjct: 301 GVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWM 360

Query: 361 TGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLT 420
           TGNYKSHPD+KFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLT
Sbjct: 361 TGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLT 420

Query: 421 AKPKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPT 480
           A PKKLQWNCTDVEG SSDVVPPPCAPLAKA KSGGCDFP DQLPIE+VQLKTCFVQNPT
Sbjct: 421 ATPKKLQWNCTDVEGFSSDVVPPPCAPLAKAGKSGGCDFPEDQLPIERVQLKTCFVQNPT 480

[Close]

BLAST of MELO3C005839 vs. NCBI nr
Match: XP_038906749.1 (probable polygalacturonase [Benincasa hispida])

HSP 1 Score: 914.1 bits (2361), Expect = 5.2e-262
Identity = 439/478 (91.84%), Postives = 461/478 (96.44%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCP-TNYLQVPAINCRQHTAVLTDF 60
           MDLP+  TK H  AARISAVI+LALVSLATVEGK+ CP TNYL+VPAI+CR+HTAVLTDF
Sbjct: 1   MDLPKNSTKFHVTAARISAVIILALVSLATVEGKKPCPTTNYLEVPAISCRKHTAVLTDF 60

Query: 61  GGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATI 120
           GGVGDGVTSNT AFR+AIEHLSPLAA+GGAQLIVPPGKWLTGSFNLTSHFTLFVHK ATI
Sbjct: 61  GGVGDGVTSNTHAFRQAIEHLSPLAADGGAQLIVPPGKWLTGSFNLTSHFTLFVHKYATI 120

Query: 121 LASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDK 180
           LASQDESEWP VA+LPSYG GRDAPGGRYSSLI+GTNLTDVVITGNNGTIDGQGSYWWDK
Sbjct: 121 LASQDESEWPLVAVLPSYGRGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGSYWWDK 180

Query: 181 FHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPN 240
           FHK ELN+TRPY+IE++YSDQIQIS+LTLVNSPSWFVHPIYS+NVII+GLTILAPIDSPN
Sbjct: 181 FHKDELNVTRPYLIEMMYSDQIQISDLTLVNSPSWFVHPIYSRNVIIRGLTILAPIDSPN 240

Query: 241 TDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG 300
           TDGIDPDSCSN RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG
Sbjct: 241 TDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG 300

Query: 301 IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT 360
           IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT
Sbjct: 301 IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT 360

Query: 361 GNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTA 420
           GNYKSHPD+KFDP A+PEITNINYRDVVAENVTYSARLEGISGDPFT+ICISNVKIGLTA
Sbjct: 361 GNYKSHPDDKFDPTAVPEITNINYRDVVAENVTYSARLEGISGDPFTDICISNVKIGLTA 420

Query: 421 KPKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNP 478
           KPKKLQWNCTDVEG SSDV+PPPCAPLAKAAKSGGC FP D+LPIEKVQLKTCFVQNP
Sbjct: 421 KPKKLQWNCTDVEGFSSDVMPPPCAPLAKAAKSGGCYFPEDELPIEKVQLKTCFVQNP 478

[Close]

BLAST of MELO3C005839 vs. NCBI nr
Match: XP_023532553.1 (probable polygalacturonase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 858.6 bits (2217), Expect = 2.6e-245
Identity = 413/478 (86.40%), Postives = 441/478 (92.26%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCP-TNYLQVPAINCRQHTAVLTDF 60
           MDLP KPTKT   AAR+SAVILLA VSL +V+GK+ CP ++YL+ PAI+CR+HTAVLTDF
Sbjct: 1   MDLPHKPTKTQITAARVSAVILLAFVSLGSVDGKKPCPFSSYLEFPAISCRKHTAVLTDF 60

Query: 61  GGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATI 120
           GGVGDGVTSNT AFR A+EHLS LA +GGAQLIVPPGKWLTGSFNLTSHFTLFVHKDA I
Sbjct: 61  GGVGDGVTSNTNAFREAMEHLSTLAVDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDAQI 120

Query: 121 LASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDK 180
           LASQDESEWP V +LPSYG GRDAPGGR+SSLI+GTNLTDVVITGNNGTIDGQGSYWWDK
Sbjct: 121 LASQDESEWPLVEVLPSYGRGRDAPGGRFSSLIFGTNLTDVVITGNNGTIDGQGSYWWDK 180

Query: 181 FHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPN 240
           FH+ ELN+TRPYMIEI+YSDQIQISNLTLVNSPSWFVHPIYS+NVIIQGLTILAPIDSPN
Sbjct: 181 FHRNELNVTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSRNVIIQGLTILAPIDSPN 240

Query: 241 TDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG 300
           TDGIDPDSC N RIEDCFIVSGDDCIAVKSGWDQYGI+FGMPTEDL+IRRLTCISPDSAG
Sbjct: 241 TDGIDPDSCINTRIEDCFIVSGDDCIAVKSGWDQYGIQFGMPTEDLLIRRLTCISPDSAG 300

Query: 301 IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT 360
           IALGSEMSGGIRNVRIENVT INTQSAVRIKTA GRGG+VKDIFVR M+LSTMKYVFWMT
Sbjct: 301 IALGSEMSGGIRNVRIENVTAINTQSAVRIKTAIGRGGYVKDIFVRQMFLSTMKYVFWMT 360

Query: 361 GNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTA 420
           GNYKSHPDEKFDP ALPEI NINYRDVVAENVTYSARL+GISGDPFT+ICISNVKIGLTA
Sbjct: 361 GNYKSHPDEKFDPKALPEIKNINYRDVVAENVTYSARLDGISGDPFTDICISNVKIGLTA 420

Query: 421 KPKKLQWNCTDVEGISSDVVPPPCAPLAK-AAKSGGCDFPADQLPIEKVQLKTCFVQN 477
           KPKKLQWNCT+VEG SSDVVPPPCAPLAK    S GC FP D+LPIE V+L TC  +N
Sbjct: 421 KPKKLQWNCTNVEGYSSDVVPPPCAPLAKEVVSSDGCPFPEDRLPIEDVKLMTCVTKN 478

[Close]

BLAST of MELO3C005839 vs. NCBI nr
Match: XP_022996001.1 (probable polygalacturonase [Cucurbita maxima])

HSP 1 Score: 853.2 bits (2203), Expect = 1.1e-243
Identity = 413/478 (86.40%), Postives = 438/478 (91.63%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCP-TNYLQVPAINCRQHTAVLTDF 60
           MDLP KPTKT   A RISAVILL LVSLA+V+GK+ CP ++YL+  AI+CR+HTAVLTDF
Sbjct: 1   MDLPHKPTKTQITAVRISAVILLVLVSLASVDGKKPCPFSSYLEFSAISCRKHTAVLTDF 60

Query: 61  GGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATI 120
           GGVGDGVTSNT AFR AIEHLS LA +GG+QLIVPPGKWLTGSFNLTSHFTLFVHKDA I
Sbjct: 61  GGVGDGVTSNTNAFREAIEHLSTLAIDGGSQLIVPPGKWLTGSFNLTSHFTLFVHKDAQI 120

Query: 121 LASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDK 180
           LASQDESEWP V +LPSYG GRDAPGGR+SSLI+GTNLTDVVITGNNGTIDGQGSYWWDK
Sbjct: 121 LASQDESEWPLVEVLPSYGRGRDAPGGRFSSLIFGTNLTDVVITGNNGTIDGQGSYWWDK 180

Query: 181 FHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPN 240
           FHK E N+TRPYMIEI+YSDQIQISNLTLVNSPSWFVHPIYS+NVIIQGLTILAPIDSPN
Sbjct: 181 FHKNEFNVTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSRNVIIQGLTILAPIDSPN 240

Query: 241 TDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG 300
           TDGIDPDSC N RIEDCFIVSGDDCIAVKSGWDQYGI+FGMPTEDL+IRRLTCISPDSAG
Sbjct: 241 TDGIDPDSCINTRIEDCFIVSGDDCIAVKSGWDQYGIQFGMPTEDLLIRRLTCISPDSAG 300

Query: 301 IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT 360
           IALGSEMSGGIRNVRIENVT INTQSAVRIKTA GRGG+VKDIFVR M+LSTMKYVFWMT
Sbjct: 301 IALGSEMSGGIRNVRIENVTAINTQSAVRIKTAIGRGGYVKDIFVRQMFLSTMKYVFWMT 360

Query: 361 GNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTA 420
           GNYKSHPDEKFDP ALPEI NINYRDVVAENVTYSARL+GISGDPFT+ICISNVKIGLTA
Sbjct: 361 GNYKSHPDEKFDPKALPEIKNINYRDVVAENVTYSARLDGISGDPFTDICISNVKIGLTA 420

Query: 421 KPKKLQWNCTDVEGISSDVVPPPCAPLAK-AAKSGGCDFPADQLPIEKVQLKTCFVQN 477
           KPKKLQWNCT+VEG SSDVVP PCAPLAK    S GC FP DQLPIE V+L TC  +N
Sbjct: 421 KPKKLQWNCTNVEGYSSDVVPLPCAPLAKEVVSSDGCPFPEDQLPIEDVKLMTCITKN 478

[Close]

BLAST of MELO3C005839 vs. ExPASy Swiss-Prot
Match: A7PZL3 (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 6.7e-180
Identity = 296/455 (65.05%), Postives = 362/455 (79.56%), Query Frame = 0


Query: 20  VILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAIEH 79
           V ++ L+S++  E ++      L+  AI+CR H+A L DFGGVGDG T NT+AF+ A+  
Sbjct: 29  VAVVLLLSVSRGECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSE 88

Query: 80  LSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSYGV 139
           LS   + GGAQL VP GKWLTGSF+LTSHFTLF+H+DA +LASQD S+WP +  LPSYG 
Sbjct: 89  LSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGR 148

Query: 140 GRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGELNLTRPYMIEILYSD 199
           GRDA  GRY+SLI+GTNLTDV+ITG+NGTIDGQG  WW +FH G+L  TRPY+IE++YS 
Sbjct: 149 GRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSA 208

Query: 200 QIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIEDCFIV 259
            IQISNLTL+NSPSW VHP+YS+N++IQG+TILAP+ SPNTDGI+PDSC+N RIEDC+IV
Sbjct: 209 DIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIV 268

Query: 260 SGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVT 319
           SGDDC+AVKSGWD+YGI +GMPT+ LVIRRLTCISP SA IALGSEMSGGI++VR E++ 
Sbjct: 269 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIV 328

Query: 320 GINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPEIT 379
            IN++S +RIKT  GRGG+VKDI+VRGM + TMK+ FWMTGNY SH D  +DP A P I 
Sbjct: 329 AINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQ 388

Query: 380 NINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISSDVV 439
            INYRD+VAENV+ +ARLEGI  DPFT ICISNV I L AK KK+ W CTDVEGISS V 
Sbjct: 389 GINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVT 448

Query: 440 PPPCAPLAKAA--KSGGCDFPADQLPIEKVQLKTC 473
           P PC+ L      K+  C+FPA+ LPI+ V+L+ C
Sbjct: 449 PTPCSTLPDQGPEKTSLCNFPAESLPIDTVELQKC 483

[Close]

BLAST of MELO3C005839 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-33
Identity = 118/403 (29.28%), Postives = 179/403 (44.42%), Query Frame = 0


Query: 56  LTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKW-------LTGSFNLTSH 115
           +T FG VGDGVT ++QAF +A E  +  +  G  Q +VP G           GS   T  
Sbjct: 26  VTQFGAVGDGVTDDSQAFLKAWE--AVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPV 85

Query: 116 FTLFVHKDATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGT 175
           F   + K    L +  +  W                 G     I  T++  +VI G +G 
Sbjct: 86  FVQMLGK----LVAPSKGNWK----------------GDKDQWILFTDIEGLVIEG-DGE 145

Query: 176 IDGQGSYWWDKFHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQG 235
           I+GQGS WW+  HKG    +RP  ++    + +++S LT ++SP   +H      V I  
Sbjct: 146 INGQGSSWWE--HKG----SRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISS 205

Query: 236 LTILAPIDSPNTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIR 295
           L I AP  SPNTDGID  + SN+ I+DC I +GDDCIA+ SG           T ++ I 
Sbjct: 206 LRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHIS 265

Query: 296 RLTCISPDSAGIALGSEMSGG----IRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFV 355
            + C      GI++GS    G    + NV ++N     T +  RIKT +G  G+ + I  
Sbjct: 266 GIDC--GPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITF 325

Query: 356 RGMYLSTMKY-----VFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEG 415
            G+ L  ++       F+  G+  +  D K     + ++   N+  +      Y      
Sbjct: 326 NGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNF--IGTSKSEYGVDFRC 384

Query: 416 ISGDPFTNICISNVKI--GLTAKPKKLQWNCTDVEGISSDVVP 441
               P T I + ++KI    +   +  Q  C +V G S+  VP
Sbjct: 386 SERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVP 384

[Close]

BLAST of MELO3C005839 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.3e-29
Identity = 117/405 (28.89%), Postives = 172/405 (42.47%), Query Frame = 0


Query: 59  FGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGS---FNLTSHFTLFVHK 118
           +G VGDG   +T+AF       +       A L+VP  K    +   F       L    
Sbjct: 64  YGAVGDGKHDSTEAFATT---WNAACKKASAVLLVPANKKFFVNNLVFRGPCQPHLSFKV 123

Query: 119 DATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSY 178
           D TI+A  D + W    I   +                   LTD  + G  G IDGQG  
Sbjct: 124 DGTIVAQPDPARWKNSKIWLQF-----------------AQLTDFNLMG-TGVIDGQGQQ 183

Query: 179 WWD---KFHKGEL---NLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGL 238
           WW    K   G     +  RP  I+I YS  + +  LTL+NSP + +     + V IQGL
Sbjct: 184 WWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGL 243

Query: 239 TILAPIDSPNTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRR 298
            I AP DSPNTDGID  +     IE C I +GDDCIA+ +G           + ++ I+ 
Sbjct: 244 KIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKD 303

Query: 299 LTCISPDSAGIALGS----EMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVR 358
           L C      GI++GS         + +V +     I+TQ+ +RIKT +G  G    I   
Sbjct: 304 LIC--GPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYE 363

Query: 359 GMYLSTMKYVFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSA-RLEGISGDP 418
            + +   +    +   Y +      +  +  +I  + Y+++   + T +A +L      P
Sbjct: 364 NVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVP 423

Query: 419 FTNICISNVKIGLTA-KPKKLQWNCTD--VEGISSDVVPPPCAPL 447
            T I +SNV + LT+ KP     +C D    G  S  + P C  L
Sbjct: 424 CTGIQLSNVSLKLTSGKPA----SCVDKNARGFYSGRLIPTCKNL 430

[Close]

BLAST of MELO3C005839 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 3.1e-28
Identity = 106/402 (26.37%), Postives = 177/402 (44.03%), Query Frame = 0


Query: 53  TAVLTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGK-WLTGSFNLTS--HF 112
           T  ++DFG  GDG T +TQAF  A +     ++NG   L+VP G  +L  S  LT   + 
Sbjct: 67  TVSVSDFGAKGDGKTDDTQAFVNAWK--KACSSNGAVNLLVPKGNTYLLKSIQLTGPCNS 126

Query: 113 TLFVHKDATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTI 172
            L V    T+ ASQ  S++  ++              ++       NL+  V  G+ G +
Sbjct: 127 ILTVQIFGTLSASQKRSDYKDIS--------------KWIMFDGVNNLS--VDGGDTGVV 186

Query: 173 DGQGSYWWD---KFHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVII 232
           DG G  WW    K +K +     P  +    S  + + NL + N+    +      NV +
Sbjct: 187 DGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQV 246

Query: 233 QGLTILAPIDSPNTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLV 292
             + + AP DSPNTDGI   +  NIR+ +  I +GDDCI+++SG           ++++ 
Sbjct: 247 SNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQ 306

Query: 293 IRRLTCISPDSAGIALGS----EMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDI 352
           I  +TC      GI++GS         +  V ++      T + VRIKT +G  G   +I
Sbjct: 307 INDITC--GPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNI 366

Query: 353 FVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISG 412
             + + +  +K    +  +Y        + +A+ ++ N+ YRD+   + + +A     S 
Sbjct: 367 IFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAV-QVKNVVYRDISGTSASENAITFNCSK 426

Query: 413 D-PFTNICISNVKIGLTAKPKKLQWNCTDVEGISSDVVPPPC 444
           + P   I +  V I      K  +  CT+   +    V P C
Sbjct: 427 NYPCQGIVLDRVNI------KGGKATCTNANVVDKGAVLPQC 430

[Close]

BLAST of MELO3C005839 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.0e-27
Identity = 110/380 (28.95%), Postives = 171/380 (45.00%), Query Frame = 0


Query: 59  FGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLT------SHFTLF 118
           +G VGDG   +T AF +     +       A  +VP  K    + NL        HF+  
Sbjct: 65  YGAVGDGKHDSTDAFEKT---WNAACNKLSAVFLVPANKKFVVN-NLVFYGPCQPHFSFK 124

Query: 119 VHKDATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQ 178
           V  D TI A  D ++W    I                  ++   LTD  + G  G IDGQ
Sbjct: 125 V--DGTIAAYPDPAKWKNSKI-----------------WMHFARLTDFNLMG-TGVIDGQ 184

Query: 179 GSYWWDKFHKGELNLT------RPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSK--NV 238
           G+ WW    K     T      RP  I+I +S  + +  LTL NSP +  H ++ +   V
Sbjct: 185 GNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEF--HLVFGECDGV 244

Query: 239 IIQGLTILAPIDSPNTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTED 298
            IQG+ I AP DSPNTDGID  +     IE C I +GDDC+AV +G           + +
Sbjct: 245 KIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSN 304

Query: 299 LVIRRLTCISPDSAGIALGSEMSGGIRN----VRIENVTGINTQSAVRIKTARGRGGFVK 358
           + I+ LTC      G+++GS   G  R+    V ++    I+TQ+ +RIKT +G  G   
Sbjct: 305 ITIKDLTC--GPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLAS 364

Query: 359 DIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSA-RLEG 418
            I    + +   +    +   Y +      +  +  +I ++ ++++   + T +A +L  
Sbjct: 365 HITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAAIQLMC 405

Query: 419 ISGDPFTNICISNVKIGLTA 420
               P +NI +SNV + LT+
Sbjct: 425 SDSVPCSNIKLSNVFLKLTS 405

[Close]

BLAST of MELO3C005839 vs. ExPASy TrEMBL
Match: A0A5D3C461 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00950 PE=3 SV=1)

HSP 1 Score: 991.9 bits (2563), Expect = 9.4e-286
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60
           MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG
Sbjct: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60

Query: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120
           GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL
Sbjct: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120

Query: 121 ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF 180
           ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF
Sbjct: 121 ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF 180

Query: 181 HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT 240
           HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT
Sbjct: 181 HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT 240

Query: 241 DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI 300
           DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI
Sbjct: 241 DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI 300

Query: 301 ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG 360
           ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG
Sbjct: 301 ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG 360

Query: 361 NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK 420
           NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK
Sbjct: 361 NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK 420

Query: 421 PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD 480
           PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD
Sbjct: 421 PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD 480

[Close]

BLAST of MELO3C005839 vs. ExPASy TrEMBL
Match: A0A1S3AUV5 (probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103482916 PE=3 SV=1)

HSP 1 Score: 991.9 bits (2563), Expect = 9.4e-286
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60
           MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG
Sbjct: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60

Query: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120
           GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL
Sbjct: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120

Query: 121 ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF 180
           ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF
Sbjct: 121 ASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKF 180

Query: 181 HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT 240
           HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT
Sbjct: 181 HKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNT 240

Query: 241 DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI 300
           DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI
Sbjct: 241 DGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGI 300

Query: 301 ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG 360
           ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG
Sbjct: 301 ALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTG 360

Query: 361 NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK 420
           NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK
Sbjct: 361 NYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAK 420

Query: 421 PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD 480
           PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD
Sbjct: 421 PKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPTVD 480

[Close]

BLAST of MELO3C005839 vs. ExPASy TrEMBL
Match: A0A0A0KNF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140480 PE=3 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 1.0e-268
Identity = 449/481 (93.35%), Postives = 466/481 (96.88%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFG 60
           M LPQ PTKTHDAAARISAVILLAL+SLATVEGKR CPTNYLQVPAI+CR+HTA++TDFG
Sbjct: 1   MYLPQDPTKTHDAAARISAVILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFG 60

Query: 61  GVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATIL 120
           GVGDGVTSNTQAFRRAIEHLS LAA+GGAQL VPPGKWLTGSFNLTSHFTLFVHKDA IL
Sbjct: 61  GVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKIL 120

Query: 121 ASQ--DESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWD 180
            SQ  +ESEWPQVA+LPSYGVGRDAPGGRYSSLI+GTNLTDVVITGNNGTIDGQG+YWWD
Sbjct: 121 GSQVENESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWD 180

Query: 181 KFHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSP 240
           KFHKGELNLTRPY+IEI+YSDQIQIS+LTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSP
Sbjct: 181 KFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSP 240

Query: 241 NTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSA 300
           NTDGIDPDSCSN RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVI+RLTCISPDSA
Sbjct: 241 NTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSA 300

Query: 301 GIALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWM 360
           G+ALGSEMSGGIRNVRIEN TGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWM
Sbjct: 301 GVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWM 360

Query: 361 TGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLT 420
           TGNYKSHPD+KFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLT
Sbjct: 361 TGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLT 420

Query: 421 AKPKKLQWNCTDVEGISSDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTCFVQNPT 480
           A PKKLQWNCTDVEG SSDVVPPPCAPLAKA KSGGCDFP DQLPIE+VQLKTCFVQNPT
Sbjct: 421 ATPKKLQWNCTDVEGFSSDVVPPPCAPLAKAGKSGGCDFPEDQLPIERVQLKTCFVQNPT 480

[Close]

BLAST of MELO3C005839 vs. ExPASy TrEMBL
Match: A0A6J1K3G8 (probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111491343 PE=3 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 5.2e-244
Identity = 413/478 (86.40%), Postives = 438/478 (91.63%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCP-TNYLQVPAINCRQHTAVLTDF 60
           MDLP KPTKT   A RISAVILL LVSLA+V+GK+ CP ++YL+  AI+CR+HTAVLTDF
Sbjct: 1   MDLPHKPTKTQITAVRISAVILLVLVSLASVDGKKPCPFSSYLEFSAISCRKHTAVLTDF 60

Query: 61  GGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATI 120
           GGVGDGVTSNT AFR AIEHLS LA +GG+QLIVPPGKWLTGSFNLTSHFTLFVHKDA I
Sbjct: 61  GGVGDGVTSNTNAFREAIEHLSTLAIDGGSQLIVPPGKWLTGSFNLTSHFTLFVHKDAQI 120

Query: 121 LASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDK 180
           LASQDESEWP V +LPSYG GRDAPGGR+SSLI+GTNLTDVVITGNNGTIDGQGSYWWDK
Sbjct: 121 LASQDESEWPLVEVLPSYGRGRDAPGGRFSSLIFGTNLTDVVITGNNGTIDGQGSYWWDK 180

Query: 181 FHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPN 240
           FHK E N+TRPYMIEI+YSDQIQISNLTLVNSPSWFVHPIYS+NVIIQGLTILAPIDSPN
Sbjct: 181 FHKNEFNVTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSRNVIIQGLTILAPIDSPN 240

Query: 241 TDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG 300
           TDGIDPDSC N RIEDCFIVSGDDCIAVKSGWDQYGI+FGMPTEDL+IRRLTCISPDSAG
Sbjct: 241 TDGIDPDSCINTRIEDCFIVSGDDCIAVKSGWDQYGIQFGMPTEDLLIRRLTCISPDSAG 300

Query: 301 IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT 360
           IALGSEMSGGIRNVRIENVT INTQSAVRIKTA GRGG+VKDIFVR M+LSTMKYVFWMT
Sbjct: 301 IALGSEMSGGIRNVRIENVTAINTQSAVRIKTAIGRGGYVKDIFVRQMFLSTMKYVFWMT 360

Query: 361 GNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTA 420
           GNYKSHPDEKFDP ALPEI NINYRDVVAENVTYSARL+GISGDPFT+ICISNVKIGLTA
Sbjct: 361 GNYKSHPDEKFDPKALPEIKNINYRDVVAENVTYSARLDGISGDPFTDICISNVKIGLTA 420

Query: 421 KPKKLQWNCTDVEGISSDVVPPPCAPLAK-AAKSGGCDFPADQLPIEKVQLKTCFVQN 477
           KPKKLQWNCT+VEG SSDVVP PCAPLAK    S GC FP DQLPIE V+L TC  +N
Sbjct: 421 KPKKLQWNCTNVEGYSSDVVPLPCAPLAKEVVSSDGCPFPEDQLPIEDVKLMTCITKN 478

[Close]

BLAST of MELO3C005839 vs. ExPASy TrEMBL
Match: A0A6J1H0R5 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111459096 PE=3 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.9e-242
Identity = 407/478 (85.15%), Postives = 438/478 (91.63%), Query Frame = 0


Query: 1   MDLPQKPTKTHDAAARISAVILLALVSLATVEGKRQCP-TNYLQVPAINCRQHTAVLTDF 60
           MDLP KPTKT   AARIS VILLALVSL +V+GK+ CP ++YL+ PAI+CR+HTAVLTDF
Sbjct: 1   MDLPHKPTKTQITAARISVVILLALVSLGSVDGKKSCPFSSYLEFPAISCRKHTAVLTDF 60

Query: 61  GGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATI 120
           GG+GDGVTSNT AFR A+EHLS LA +GGAQLIVPPGKWLTGSFNLTSHFTLFVHKDA I
Sbjct: 61  GGIGDGVTSNTNAFREAMEHLSTLAVDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDAQI 120

Query: 121 LASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDK 180
           LASQDESEWP V +LPSYG GRDAP GR+SSLI+GTNLTDVVITGNNGTIDGQGSYWWDK
Sbjct: 121 LASQDESEWPLVEVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSYWWDK 180

Query: 181 FHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPN 240
           FHK E N+TRPYMIEI+YS+QIQISNLTLVNSPSWFVHPIYS+NVIIQGLTILAPIDSPN
Sbjct: 181 FHKNEFNVTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSRNVIIQGLTILAPIDSPN 240

Query: 241 TDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAG 300
           TDGIDPDSC N RIEDCFIVSGDDCIAVKSGWDQYGI+FGMPTEDL+IRRLTCISPDSAG
Sbjct: 241 TDGIDPDSCINTRIEDCFIVSGDDCIAVKSGWDQYGIQFGMPTEDLLIRRLTCISPDSAG 300

Query: 301 IALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMT 360
           IALGSEMSGGIRNVRIENVT INTQSAVRIKTA GRGG+VKDIFVR M+LSTMKYVFWMT
Sbjct: 301 IALGSEMSGGIRNVRIENVTAINTQSAVRIKTAIGRGGYVKDIFVRQMFLSTMKYVFWMT 360

Query: 361 GNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTA 420
           G+YKSHPDEKFDP ALPEI NINYRDVVAENVTYSARL+GISGDPFT+ICISN+KIGLTA
Sbjct: 361 GDYKSHPDEKFDPKALPEIKNINYRDVVAENVTYSARLDGISGDPFTDICISNIKIGLTA 420

Query: 421 KPKKLQWNCTDVEGISSDVVPPPCAPLAK-AAKSGGCDFPADQLPIEKVQLKTCFVQN 477
           K KKLQWNCT+VEG SSDVVPPPCAPLAK    S GC FP D+LPIE ++L TC  +N
Sbjct: 421 KQKKLQWNCTNVEGYSSDVVPPPCAPLAKEVVSSDGCPFPEDRLPIEDLKLMTCVTKN 478

[Close]

BLAST of MELO3C005839 vs. TAIR 10
Match: AT3G48950.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 659.1 bits (1699), Expect = 2.8e-189
Identity = 313/461 (67.90%), Postives = 375/461 (81.34%), Query Frame = 0


Query: 20  VILLALVSLATVEGK--RQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAI 79
           ++ LA+     +E +  R   T+ ++  A+NCR+H+A+LTDFG VGDG TSNT+AFR AI
Sbjct: 9   LVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAI 68

Query: 80  EHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSY 139
             LS +A +GGAQL+VPPGKWLTGSFNLTSHFTLF+ + ATILASQDESEWP +A LPSY
Sbjct: 69  SKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPSY 128

Query: 140 GVGRDAPG-GRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGELNLTRPYMIEIL 199
           G GRD  G GR++SLI GTNLTDVVITGNNGTI+GQG YWWDKF K +  +TRPY+IEIL
Sbjct: 129 GKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEIL 188

Query: 200 YSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIEDC 259
           +S  IQISN+TL++SPSW +HP+Y  +VI++ +T+LAP+  PNTDGI+PDSC+N  IEDC
Sbjct: 189 FSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDC 248

Query: 260 FIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIE 319
           +IVSGDDCIAVKSGWDQYGIKFGMPT+ L IRRLTCISP SAG+ALGSEMSGGI++VRIE
Sbjct: 249 YIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIE 308

Query: 320 NVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALP 379
           +VT  NT+SA+RIKTA GRG +VKDI+ R + + TMKYVFWM+GNY SHPDE FDP ALP
Sbjct: 309 DVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALP 368

Query: 380 EITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISS 439
           EITNINYRD+ AENVT SA L+GI  DPFT ICISNV I L AK KK+QWNCTDV G++S
Sbjct: 369 EITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTS 428

Query: 440 DVVPPPCA--PLAKA-AKSGGCDFPADQLPIEKVQLKTCFV 475
            V P PC+  P  KA AK+  C FP+D +PIE V LK CF+
Sbjct: 429 RVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKCFL 469

[Close]

BLAST of MELO3C005839 vs. TAIR 10
Match: AT3G61490.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 639.0 bits (1647), Expect = 3.0e-183
Identity = 299/466 (64.16%), Postives = 369/466 (79.18%), Query Frame = 0


Query: 20  VILLALVSLATVEGKRQCPTNY--LQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAI 79
           V ++ L +L T+   R+   ++   +  AI CR H+A +T++GGVGDG T NT+AF+ A+
Sbjct: 9   VTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAV 68

Query: 80  EHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSY 139
           +HLS  ++ GGAQL VP GKWLTGSFNLTSHFTLF+HKDA +LA+QD +E+P +  LPSY
Sbjct: 69  DHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSY 128

Query: 140 GVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGELNLTRPYMIEILY 199
           G GRDA GGR++SLI+GTNL+DV+ITGNNGTIDGQGS+WW KFH G+L  TRPY+IE+++
Sbjct: 129 GRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMF 188

Query: 200 SDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIEDCF 259
           SD IQISNLT ++SPSW +HP+YS N+I++G+TI+AP+ SPNTDGI+PDSC+N RIEDC+
Sbjct: 189 SDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCY 248

Query: 260 IVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIEN 319
           I+SGDDCIAVKSGWD+YGI FGMPT+ LVIRRLTCISP SA IALGSEMSGGI +VR E+
Sbjct: 249 IISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAED 308

Query: 320 VTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPE 379
           +T   T+S VRIKTA GRG FVK+I+V+GM L TMK+VFWMTGNYK+H D  +DP ALPE
Sbjct: 309 ITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPE 368

Query: 380 ITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISSD 439
           IT INYRD+VAENV+ + RLEGISGDPFT ICISN  I + AK KK  W C+DVEG++S 
Sbjct: 369 ITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSG 428

Query: 440 VVPPPCAPL--------AKAAKSGGCDFPADQLPIEKVQLKTCFVQ 476
           V P PC  L         K    GGCDFP D L I+ V+LKTC  Q
Sbjct: 429 VDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQ 474

[Close]

BLAST of MELO3C005839 vs. TAIR 10
Match: AT3G61490.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 639.0 bits (1647), Expect = 3.0e-183
Identity = 299/466 (64.16%), Postives = 369/466 (79.18%), Query Frame = 0


Query: 20  VILLALVSLATVEGKRQCPTNY--LQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAI 79
           V ++ L +L T+   R+   ++   +  AI CR H+A +T++GGVGDG T NT+AF+ A+
Sbjct: 9   VTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAV 68

Query: 80  EHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSY 139
           +HLS  ++ GGAQL VP GKWLTGSFNLTSHFTLF+HKDA +LA+QD +E+P +  LPSY
Sbjct: 69  DHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSY 128

Query: 140 GVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGELNLTRPYMIEILY 199
           G GRDA GGR++SLI+GTNL+DV+ITGNNGTIDGQGS+WW KFH G+L  TRPY+IE+++
Sbjct: 129 GRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMF 188

Query: 200 SDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIEDCF 259
           SD IQISNLT ++SPSW +HP+YS N+I++G+TI+AP+ SPNTDGI+PDSC+N RIEDC+
Sbjct: 189 SDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCY 248

Query: 260 IVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIEN 319
           I+SGDDCIAVKSGWD+YGI FGMPT+ LVIRRLTCISP SA IALGSEMSGGI +VR E+
Sbjct: 249 IISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAED 308

Query: 320 VTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPE 379
           +T   T+S VRIKTA GRG FVK+I+V+GM L TMK+VFWMTGNYK+H D  +DP ALPE
Sbjct: 309 ITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPE 368

Query: 380 ITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISSD 439
           IT INYRD+VAENV+ + RLEGISGDPFT ICISN  I + AK KK  W C+DVEG++S 
Sbjct: 369 ITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSG 428

Query: 440 VVPPPCAPL--------AKAAKSGGCDFPADQLPIEKVQLKTCFVQ 476
           V P PC  L         K    GGCDFP D L I+ V+LKTC  Q
Sbjct: 429 VDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQ 474

[Close]

BLAST of MELO3C005839 vs. TAIR 10
Match: AT3G61490.3 (Pectin lyase-like superfamily protein )

HSP 1 Score: 639.0 bits (1647), Expect = 3.0e-183
Identity = 299/466 (64.16%), Postives = 369/466 (79.18%), Query Frame = 0


Query: 20  VILLALVSLATVEGKRQCPTNY--LQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAI 79
           V ++ L +L T+   R+   ++   +  AI CR H+A +T++GGVGDG T NT+AF+ A+
Sbjct: 9   VTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAV 68

Query: 80  EHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSY 139
           +HLS  ++ GGAQL VP GKWLTGSFNLTSHFTLF+HKDA +LA+QD +E+P +  LPSY
Sbjct: 69  DHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSY 128

Query: 140 GVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGELNLTRPYMIEILY 199
           G GRDA GGR++SLI+GTNL+DV+ITGNNGTIDGQGS+WW KFH G+L  TRPY+IE+++
Sbjct: 129 GRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMF 188

Query: 200 SDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIEDCF 259
           SD IQISNLT ++SPSW +HP+YS N+I++G+TI+AP+ SPNTDGI+PDSC+N RIEDC+
Sbjct: 189 SDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCY 248

Query: 260 IVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIEN 319
           I+SGDDCIAVKSGWD+YGI FGMPT+ LVIRRLTCISP SA IALGSEMSGGI +VR E+
Sbjct: 249 IISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAED 308

Query: 320 VTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPE 379
           +T   T+S VRIKTA GRG FVK+I+V+GM L TMK+VFWMTGNYK+H D  +DP ALPE
Sbjct: 309 ITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPE 368

Query: 380 ITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISSD 439
           IT INYRD+VAENV+ + RLEGISGDPFT ICISN  I + AK KK  W C+DVEG++S 
Sbjct: 369 ITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSG 428

Query: 440 VVPPPCAPL--------AKAAKSGGCDFPADQLPIEKVQLKTCFVQ 476
           V P PC  L         K    GGCDFP D L I+ V+LKTC  Q
Sbjct: 429 VDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQ 474

[Close]

BLAST of MELO3C005839 vs. TAIR 10
Match: AT2G23900.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 634.4 bits (1635), Expect = 7.3e-182
Identity = 299/457 (65.43%), Postives = 364/457 (79.65%), Query Frame = 0


Query: 20  VILLALVSLATVEGK---RQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRA 79
           +++LA+ S + +E +    +  TN ++  A+NCR+HTAVLT+FG VGDG TSNT+AF+ A
Sbjct: 20  LVVLAISSFSMMEARDLASKGKTN-IEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEA 79

Query: 80  IEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPS 139
           I  L+P AA+GG QLIVPPGKWLTGSFNLTSHFTLF+ K ATILASQDESE+P VA LPS
Sbjct: 80  ITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPS 139

Query: 140 YGVGRDAPGGRYSSLIYGTNLTDVVITGNNGTIDGQGSYWWDKFHKGEL-NLTRPYMIEI 199
           YG GRDA G  ++SLI GTNLTDVVITGNNGTI+GQG YWW K+  G    +TRPY IEI
Sbjct: 140 YGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEI 199

Query: 200 LYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNIRIED 259
           ++S  +QISN+T+++SP+W +HP+Y  NVI++G+TILAPIDSPNTDGI+PDSC+N  IED
Sbjct: 200 IFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIED 259

Query: 260 CFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRI 319
           C++VSGDDCIAVKSGWDQ+GIK GMPT+ L IRRLTCISPDSAGIALGSEMSGGI++VRI
Sbjct: 260 CYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRI 319

Query: 320 ENVTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAAL 379
           E++T + TQSA+RIKTA GRGG+VKDIF R   + TMKYVFWM+G Y  HP   FDP A+
Sbjct: 320 EDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAM 379

Query: 380 PEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGIS 439
           P ITNINYRD+ A+NVT  ARL+G   DPFT IC+SN+KI L A+PKKL WNCT + G+S
Sbjct: 380 PVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVS 439

Query: 440 SDVVPPPCAPLAKAAKSGGCDFPADQLPIEKVQLKTC 473
           S V P PC+ L +      C FP D++PIE V L  C
Sbjct: 440 SKVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKC 475

The following BLAST results are available for this feature:

BLAST of MELO3C005839 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437531.1	1.9e-285	100.00	PREDICTED: probable polygalacturonase [Cucumis melo] >KAA0042595.1 putative poly...	[more]
XP_011654644.1	2.2e-268	93.35	probable polygalacturonase [Cucumis sativus] >KGN49922.1 hypothetical protein Cs...	[more]
XP_038906749.1	5.2e-262	91.84	probable polygalacturonase [Benincasa hispida]	[more]
XP_023532553.1	2.6e-245	86.40	probable polygalacturonase [Cucurbita pepo subsp. pepo]	[more]
XP_022996001.1	1.1e-243	86.40	probable polygalacturonase [Cucurbita maxima]	[more]

BLAST of MELO3C005839 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PZL3	6.7e-180	65.05	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 ...	[more]
Q9LW07	1.1e-33	29.28	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
Q7M1E7	8.3e-29	28.89	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
Q8RY29	3.1e-28	26.37	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
Q9FY19	2.0e-27	28.95	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]

BLAST of MELO3C005839 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C461	9.4e-286	100.00	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3AUV5	9.4e-286	100.00	probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103482916 PE=3 SV=1	[more]
A0A0A0KNF9	1.0e-268	93.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140480 PE=3 SV=1	[more]
A0A6J1K3G8	5.2e-244	86.40	probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111491343 PE=3 SV=1	[more]
A0A6J1H0R5	2.9e-242	85.15	probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111459096 PE=3 SV...	[more]

BLAST of MELO3C005839 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48950.1	2.8e-189	67.90	Pectin lyase-like superfamily protein	[more]
AT3G61490.1	3.0e-183	64.16	Pectin lyase-like superfamily protein	[more]
AT3G61490.2	3.0e-183	64.16	Pectin lyase-like superfamily protein	[more]
AT3G61490.3	3.0e-183	64.16	Pectin lyase-like superfamily protein	[more]
AT2G23900.1	7.3e-182	65.43	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 310..331 e-value: 750.0 score: 8.1 coord: 221..247 e-value: 1100.0 score: 7.0 coord: 282..304 e-value: 1900.0 score: 5.2 coord: 248..269 e-value: 88.0 score: 12.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 34..438 e-value: 4.4E-116 score: 390.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 150..432 e-value: 3.2E-41 score: 141.5
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 17..473
None	No IPR available	PANTHER	PTHR31339:SF12	ENDO-POLYGALACTURONASE-LIKE PROTEIN	coord: 17..473
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 47..473

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005839.1	MELO3C005839.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity