MELO3C005647 (gene) Melon (DHL92) v4

Overview


Name	MELO3C005647
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	methyl-CpG-binding domain-containing protein 13-like
Location	chr09: 21902861 .. 21904030 (-)
RNA-Seq Expression	MELO3C005647
Synteny	MELO3C005647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTCGGAAAAAGACAACGAACACCATATACCTAATCACAAGGATACGTCCTTACGTGAAAATCACAAGGACACTTCCTTACGTGAAAATCACAAGGACACTTCCTTATGTGAAAATTCTTCCAATAAAAGGAAAACTCTCACATGTTGCCTTGATGCCCCAGAAGAGAAAATACAGAGAGTGGAAACTGAAAAGAAGGATGATGGAAAGATGGAAGCGCAGCTGGATGTTCCAATTGCTGATTTTTGGTCAGACCCATGCTTGGAATTTGCAATCAAAACTCTTACGGGTGCGTTGCCGGTGGAGAATGCCACTACCACTAATGAGCCAGTTTCTAGTACTACAGTCGACCCAGTTTCTAATACTACAGTCGACTTCCTGCAAGGACAGAGCTCAGTAAAAAATGGTCCGGGAAGTCGCATGAATAAGAGAACTCAAGGGAACAAAAAAATCAGGAACAAGAAAGAGCTCACTACTAATAGTCAATCTCCAAGTATTAATGGGCTCAAACCTGAACTGGCATCGAATATAATTTCCTTTGATCAAGCAAACCCAAATCATCATTCAAATGAAGCTGTTTTGGCTTTTAATTTATCAGACGGTAGAATACATGGACAACCAAGTAAGAATGAACAATATATAACATCTTGCGAAATCTTGACACCCAGTGAGCTGCATCATTCCCTGCCCCCGGTAAACTCTGAACGATTTAACAGTATCAATGCATGTCATGAGAGGAGCAACATGGTGCTCGATGATCCGCATCCGATCCTTCAAACAAAGGACCATGCGACATCAGAAATTCCATTATCCTTTCCATTTGGGGATTCTTGGGCAGATCCGTGCTTGGATTTTGCATTCAAGACCCTCACAGGTGCAATACCAATAGACGATAGTCTGGAAATTCAAAGCTTCTTTGAGGAGCGACTCGAGTCCTCTCGTAGTCAAAAAGACAGTAGCCCAGCACTGCCAGATTTTGGATCCCCTAACCTCTTCCAAAATGATATATCATCCCACTTTGACGGACCTGAAAAGTCTGCTACGGGACAGCACTTGAGTTTAGATCCTCAGCTGACTCTAGGGAATGTGAGCCTACCAAGCTGCAGTGGATTCACTTCTCAACAGCAGTCTTCAGTGGATAGAAACAGATCTTTTAGAGGAAGGTGA

mRNA sequence

ATGAGGTCGGAAAAAGACAACGAACACCATATACCTAATCACAAGGATACGTCCTTACGTGAAAATCACAAGGACACTTCCTTACGTGAAAATCACAAGGACACTTCCTTATGTGAAAATTCTTCCAATAAAAGGAAAACTCTCACATGTTGCCTTGATGCCCCAGAAGAGAAAATACAGAGAGTGGAAACTGAAAAGAAGGATGATGGAAAGATGGAAGCGCAGCTGGATGTTCCAATTGCTGATTTTTGGTCAGACCCATGCTTGGAATTTGCAATCAAAACTCTTACGGGTGCGTTGCCGGTGGAGAATGCCACTACCACTAATGAGCCAGTTTCTAGTACTACAGTCGACCCAGTTTCTAATACTACAGTCGACTTCCTGCAAGGACAGAGCTCAGTAAAAAATGAAATTCCATTATCCTTTCCATTTGGGGATTCTTGGGCAGATCCGTGCTTGGATTTTGCATTCAAGACCCTCACAGGTGCAATACCAATAGACGATAGTCTGGAAATTCAAAGCTTCTTTGAGGAGCGACTCGAGTCCTCTCGTAGTCAAAAAGACAGTAGCCCAGCACTGCCAGATTTTGGATCCCCTAACCTCTTCCAAAATGATATATCATCCCACTTTGACGGACCTGAAAAGTCTGCTACGGGACAGCACTTGAGTTTAGATCCTCAGCTGACTCTAGGGAATGTGAGCCTACCAAGCTGCAGTGGATTCACTTCTCAACAGCAGTCTTCAGTGGATAGAAACAGATCTTTTAGAGGAAGGTGA

Coding sequence (CDS)

ATGAGGTCGGAAAAAGACAACGAACACCATATACCTAATCACAAGGATACGTCCTTACGTGAAAATCACAAGGACACTTCCTTACGTGAAAATCACAAGGACACTTCCTTATGTGAAAATTCTTCCAATAAAAGGAAAACTCTCACATGTTGCCTTGATGCCCCAGAAGAGAAAATACAGAGAGTGGAAACTGAAAAGAAGGATGATGGAAAGATGGAAGCGCAGCTGGATGTTCCAATTGCTGATTTTTGGTCAGACCCATGCTTGGAATTTGCAATCAAAACTCTTACGGGTGCGTTGCCGGTGGAGAATGCCACTACCACTAATGAGCCAGTTTCTAGTACTACAGTCGACCCAGTTTCTAATACTACAGTCGACTTCCTGCAAGGACAGAGCTCAGTAAAAAATGAAATTCCATTATCCTTTCCATTTGGGGATTCTTGGGCAGATCCGTGCTTGGATTTTGCATTCAAGACCCTCACAGGTGCAATACCAATAGACGATAGTCTGGAAATTCAAAGCTTCTTTGAGGAGCGACTCGAGTCCTCTCGTAGTCAAAAAGACAGTAGCCCAGCACTGCCAGATTTTGGATCCCCTAACCTCTTCCAAAATGATATATCATCCCACTTTGACGGACCTGAAAAGTCTGCTACGGGACAGCACTTGAGTTTAGATCCTCAGCTGACTCTAGGGAATGTGAGCCTACCAAGCTGCAGTGGATTCACTTCTCAACAGCAGTCTTCAGTGGATAGAAACAGATCTTTTAGAGGAAGGTGA

Protein sequence

MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLTCCLDAPEEKIQRVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSNTTVDFLQGQSSVKNEIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDSLEIQSFFEERLESSRSQKDSSPALPDFGSPNLFQNDISSHFDGPEKSATGQHLSLDPQLTLGNVSLPSCSGFTSQQQSSVDRNRSFRGR

Homology

[Close]

BLAST of MELO3C005647 vs. NCBI nr
Match: KAA0042783.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 449.9 bits (1156), Expect = 1.5e-122
Identity = 256/389 (65.81%), Postives = 257/389 (66.07%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLTCCLDAPEEKIQ 60
           MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSL ENSSNKRKTLTCCLDAP+EKIQ
Sbjct: 439 MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLRENSSNKRKTLTCCLDAPKEKIQ 498

Query: 61  RVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPV 120
           RVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPV
Sbjct: 499 RVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPV 558

Query: 121 SNTTVDFLQGQSSVKN-------------------------------------------- 180
           SNTTVDFLQGQSSVKN                                            
Sbjct: 559 SNTTVDFLQGQSSVKNGPGSRMNKRTQGNKKIRNKKELTTNSQSPSINGLKPELASNIIS 618

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 619 FDQANPNHHSNEAVLAFNLSDGRIHGQPSKNEQYITSCEILTPSELHHSLPPVNSERFNS 678

Query: 241 ---------------------------EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDS 259
                                      EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDS
Sbjct: 679 INACHERSNMVLDDPHPILQTKDHATSEIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDS 738

[Close]

BLAST of MELO3C005647 vs. NCBI nr
Match: XP_004143925.1 (methyl-CpG-binding domain-containing protein 13 [Cucumis sativus] >KGN50128.1 hypothetical protein Csa_000464 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.8e-99
Identity = 224/390 (57.44%), Postives = 232/390 (59.49%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKT-LTCCLDAPEEKI 60
           +RSEKDN+ H P         NHKDT LRENHKD SLCEN SNKRKT L C +DAPEEKI
Sbjct: 481 VRSEKDNKDHTP---------NHKDTPLRENHKDMSLCENPSNKRKTPLACGVDAPEEKI 540

Query: 61  QRVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDP 120
           QRVETEKKDDGKMEAQL+VPIADFWSDPCLEFAIKTLTGALPVENATTTNE        P
Sbjct: 541 QRVETEKKDDGKMEAQLNVPIADFWSDPCLEFAIKTLTGALPVENATTTNE--------P 600

Query: 121 VSNTTVDFLQGQSSVKN------------------------------------------- 180
           VSN TV+FLQGQSSVKN                                           
Sbjct: 601 VSNPTVNFLQGQSSVKNGPGSRMNKRTQGNKRIRNKKELTTSSQSPSINGLKPELASNII 660

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 661 SFDQANPNHHSNEAVLAFNLSDGRIHGQPSKNEQYKTSCEILTPSELHHSLPQVDSERFN 720

Query: 241 ----------------------------EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDD 259
                                       E+PLSFPFGDSWADPCLDFAFKTLTGAIPIDD
Sbjct: 721 GISACHESNNMMLDDPHQILQTNDHMTSEVPLSFPFGDSWADPCLDFAFKTLTGAIPIDD 780

[Close]

BLAST of MELO3C005647 vs. NCBI nr
Match: XP_038875367.1 (methyl-CpG-binding domain-containing protein 13-like isoform X1 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 5.5e-85
Identity = 206/391 (52.69%), Postives = 215/391 (54.99%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLTCC-LDAPEEKI 60
           +RSEKDN+ H+PN KDT L                   EN SNKRKT   C LD PEEKI
Sbjct: 478 VRSEKDNKDHVPNLKDTPLH------------------ENPSNKRKTPPACGLDVPEEKI 537

Query: 61  QRVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDP 120
           QRVETEK+DD KMEAQL+VPIADFWSDPCLEFAIKTLTGALPVENATTT+EPVS+     
Sbjct: 538 QRVETEKEDDRKMEAQLNVPIADFWSDPCLEFAIKTLTGALPVENATTTDEPVST----- 597

Query: 121 VSNTTVDFLQGQSSVK-------------------------------------------- 180
               TVDFLQGQSSVK                                            
Sbjct: 598 ---PTVDFLQGQSSVKTGPGSCMNKRTQGNKRFKNKKEPTSNRQSSSINGLKPDLASNII 657

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 658 SFEQANPNNHSNEAVLAFNLADGRIHGQPQSKNEQNRTSCQILPSSELLHPPPEVNSERF 717

Query: 241 ----------------------------NEIPLSFPFGDSWADPCLDFAFKTLTGAIPID 259
                                       +E PLSFPFGDSWADPCLDFAFKTLTGAIPID
Sbjct: 718 NRTNAYHESSKMMLDDPHQMFQTKDHTTSEAPLSFPFGDSWADPCLDFAFKTLTGAIPID 777

[Close]

BLAST of MELO3C005647 vs. NCBI nr
Match: XP_038875370.1 (methyl-CpG-binding domain-containing protein 13-like isoform X3 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 5.5e-85
Identity = 206/391 (52.69%), Postives = 215/391 (54.99%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLTCC-LDAPEEKI 60
           +RSEKDN+ H+PN KDT L                   EN SNKRKT   C LD PEEKI
Sbjct: 432 VRSEKDNKDHVPNLKDTPLH------------------ENPSNKRKTPPACGLDVPEEKI 491

Query: 61  QRVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDP 120
           QRVETEK+DD KMEAQL+VPIADFWSDPCLEFAIKTLTGALPVENATTT+EPVS+     
Sbjct: 492 QRVETEKEDDRKMEAQLNVPIADFWSDPCLEFAIKTLTGALPVENATTTDEPVST----- 551

Query: 121 VSNTTVDFLQGQSSVK-------------------------------------------- 180
               TVDFLQGQSSVK                                            
Sbjct: 552 ---PTVDFLQGQSSVKTGPGSCMNKRTQGNKRFKNKKEPTSNRQSSSINGLKPDLASNII 611

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 612 SFEQANPNNHSNEAVLAFNLADGRIHGQPQSKNEQNRTSCQILPSSELLHPPPEVNSERF 671

Query: 241 ----------------------------NEIPLSFPFGDSWADPCLDFAFKTLTGAIPID 259
                                       +E PLSFPFGDSWADPCLDFAFKTLTGAIPID
Sbjct: 672 NRTNAYHESSKMMLDDPHQMFQTKDHTTSEAPLSFPFGDSWADPCLDFAFKTLTGAIPID 731

[Close]

BLAST of MELO3C005647 vs. NCBI nr
Match: XP_038875371.1 (methyl-CpG-binding domain-containing protein 13-like isoform X4 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 5.5e-85
Identity = 206/391 (52.69%), Postives = 215/391 (54.99%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLTCC-LDAPEEKI 60
           +RSEKDN+ H+PN KDT L                   EN SNKRKT   C LD PEEKI
Sbjct: 387 VRSEKDNKDHVPNLKDTPLH------------------ENPSNKRKTPPACGLDVPEEKI 446

Query: 61  QRVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDP 120
           QRVETEK+DD KMEAQL+VPIADFWSDPCLEFAIKTLTGALPVENATTT+EPVS+     
Sbjct: 447 QRVETEKEDDRKMEAQLNVPIADFWSDPCLEFAIKTLTGALPVENATTTDEPVST----- 506

Query: 121 VSNTTVDFLQGQSSVK-------------------------------------------- 180
               TVDFLQGQSSVK                                            
Sbjct: 507 ---PTVDFLQGQSSVKTGPGSCMNKRTQGNKRFKNKKEPTSNRQSSSINGLKPDLASNII 566

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 567 SFEQANPNNHSNEAVLAFNLADGRIHGQPQSKNEQNRTSCQILPSSELLHPPPEVNSERF 626

Query: 241 ----------------------------NEIPLSFPFGDSWADPCLDFAFKTLTGAIPID 259
                                       +E PLSFPFGDSWADPCLDFAFKTLTGAIPID
Sbjct: 627 NRTNAYHESSKMMLDDPHQMFQTKDHTTSEAPLSFPFGDSWADPCLDFAFKTLTGAIPID 686

[Close]

BLAST of MELO3C005647 vs. ExPASy Swiss-Prot
Match: Q9LTJ8 (Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=MBD13 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.0e-10
Identity = 45/114 (39.47%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 63  ETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSN 122
           E  +K      +  D  +AD   DPC+ FAIKTLTG    E+    N P  S+  +P++N
Sbjct: 585 EVMEKSTNSFSSAFDSTLADLCKDPCIAFAIKTLTG----ESLCLLNTPAISS--NPINN 644

Query: 123 TT----VDFLQ------GQSSVKNEIPLSFPFGDSWADPCLDFAFKTLTGAIPI 167
            T    V F           S K   P   P  + W DPC+DFA KTLTGAIPI
Sbjct: 645 HTKQKGVSFTPETPGNVNTCSEKLVFPSPPPGANIWQDPCIDFAIKTLTGAIPI 692

[Close]

BLAST of MELO3C005647 vs. ExPASy TrEMBL
Match: A0A5A7THL7 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002860 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.2e-123
Identity = 256/389 (65.81%), Postives = 257/389 (66.07%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLTCCLDAPEEKIQ 60
           MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSL ENSSNKRKTLTCCLDAP+EKIQ
Sbjct: 439 MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLRENSSNKRKTLTCCLDAPKEKIQ 498

Query: 61  RVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPV 120
           RVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPV
Sbjct: 499 RVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPV 558

Query: 121 SNTTVDFLQGQSSVKN-------------------------------------------- 180
           SNTTVDFLQGQSSVKN                                            
Sbjct: 559 SNTTVDFLQGQSSVKNGPGSRMNKRTQGNKKIRNKKELTTNSQSPSINGLKPELASNIIS 618

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 619 FDQANPNHHSNEAVLAFNLSDGRIHGQPSKNEQYITSCEILTPSELHHSLPPVNSERFNS 678

Query: 241 ---------------------------EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDS 259
                                      EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDS
Sbjct: 679 INACHERSNMVLDDPHPILQTKDHATSEIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDS 738

[Close]

BLAST of MELO3C005647 vs. ExPASy TrEMBL
Match: A0A0A0KKL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154900 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.5e-100
Identity = 224/390 (57.44%), Postives = 232/390 (59.49%), Query Frame = 0


Query: 1   MRSEKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKT-LTCCLDAPEEKI 60
           +RSEKDN+ H P         NHKDT LRENHKD SLCEN SNKRKT L C +DAPEEKI
Sbjct: 481 VRSEKDNKDHTP---------NHKDTPLRENHKDMSLCENPSNKRKTPLACGVDAPEEKI 540

Query: 61  QRVETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDP 120
           QRVETEKKDDGKMEAQL+VPIADFWSDPCLEFAIKTLTGALPVENATTTNE        P
Sbjct: 541 QRVETEKKDDGKMEAQLNVPIADFWSDPCLEFAIKTLTGALPVENATTTNE--------P 600

Query: 121 VSNTTVDFLQGQSSVKN------------------------------------------- 180
           VSN TV+FLQGQSSVKN                                           
Sbjct: 601 VSNPTVNFLQGQSSVKNGPGSRMNKRTQGNKRIRNKKELTTSSQSPSINGLKPELASNII 660

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 661 SFDQANPNHHSNEAVLAFNLSDGRIHGQPSKNEQYKTSCEILTPSELHHSLPQVDSERFN 720

Query: 241 ----------------------------EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDD 259
                                       E+PLSFPFGDSWADPCLDFAFKTLTGAIPIDD
Sbjct: 721 GISACHESNNMMLDDPHQILQTNDHMTSEVPLSFPFGDSWADPCLDFAFKTLTGAIPIDD 780

[Close]

BLAST of MELO3C005647 vs. ExPASy TrEMBL
Match: A0A6J1K6K6 (methyl-CpG-binding domain-containing protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111491621 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.9e-71
Identity = 179/375 (47.73%), Postives = 199/375 (53.07%), Query Frame = 0


Query: 4   EKDNEHHIPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKT-LTCCLDAPEEKIQRV 63
           E+DNE H+ N KD  L                   EN SNKRKT   C LD P+EKIQR+
Sbjct: 503 ERDNEAHVSNLKDIPLH------------------ENPSNKRKTPPECGLDVPQEKIQRI 562

Query: 64  ETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSN 123
           + EKKDD ++EAQL VPIA+FWSDPCLEFAIKTLTGALPVENATTT+  VS    DP   
Sbjct: 563 QAEKKDDVQIEAQLSVPIAEFWSDPCLEFAIKTLTGALPVENATTTDGLVS----DP--- 622

Query: 124 TTVDFLQGQSSVKN---------------------------------------------- 183
            T+DFLQGQ SVKN                                              
Sbjct: 623 -TIDFLQGQKSVKNGSGSCMDKRTQENKKFKNKKEFTSNRQSSSVNGLKPELASNIISFQ 682

Query: 184 ------------------------------------------------------------ 243
                                                                       
Sbjct: 683 QANDRSNEAVLAFNLSDGGILGEPQNVQCKTSCQKFPPRELHHPPPDRINTCHESNKMAL 742

Query: 244 --------------EIPLSFPFGDSWADPCLDFAFKTLTGAIPIDDSLEIQSFFEERLES 258
                         E P+SFPFGDSWADPCLDFAFKTLTGAIPI+ SLEIQS+FEER+ES
Sbjct: 743 DDQNQKHQTKDTTSETPISFPFGDSWADPCLDFAFKTLTGAIPIEGSLEIQSYFEERIES 802

[Close]

BLAST of MELO3C005647 vs. ExPASy TrEMBL
Match: A0A6J1E021 (uncharacterized protein LOC111026151 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111026151 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 171/369 (46.34%), Postives = 193/369 (52.30%), Query Frame = 0


Query: 20  RENHKDTSLRENHKDTSLCENSSNKRKT-LTCCLDAPEEKIQRVETEKKDDGKMEAQLDV 79
           R+N  + S   N KD +L  N SNKRKT L C L  P+EKI+RV TEK+ DG+ E +L V
Sbjct: 377 RDNEDNVS---NLKDIALNGNPSNKRKTPLECSLAVPKEKIRRVHTEKRGDGETEGELSV 436

Query: 80  PIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSNTTVDFLQGQSSVKN-- 139
           PIADFWSDPCLEFAIKTLTGALPVENA+ T+E        PV N TVDFL  +S VKN  
Sbjct: 437 PIADFWSDPCLEFAIKTLTGALPVENASATDE-------GPVPNPTVDFLLEKSLVKNGS 496

Query: 140 ------------------------------------------------------------ 199
                                                                       
Sbjct: 497 GSCMNKKTQVNKKTKNKKELTSDHRSPSINGLKPELASDVTTCEQANLHSNGAFLTFNLA 556

Query: 200 ------------------------------------------------------------ 259
                                                                       
Sbjct: 557 DSGIHGEPQQKNEQCTTSSEISPVRGLRHPPPEVNTEQSNRTEGRNENRMVLHDQHQKLQ 616

[Close]

BLAST of MELO3C005647 vs. ExPASy TrEMBL
Match: A0A6J1E0Z7 (uncharacterized protein LOC111026151 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026151 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 171/369 (46.34%), Postives = 193/369 (52.30%), Query Frame = 0


Query: 20  RENHKDTSLRENHKDTSLCENSSNKRKT-LTCCLDAPEEKIQRVETEKKDDGKMEAQLDV 79
           R+N  + S   N KD +L  N SNKRKT L C L  P+EKI+RV TEK+ DG+ E +L V
Sbjct: 444 RDNEDNVS---NLKDIALNGNPSNKRKTPLECSLAVPKEKIRRVHTEKRGDGETEGELSV 503

Query: 80  PIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSNTTVDFLQGQSSVKN-- 139
           PIADFWSDPCLEFAIKTLTGALPVENA+ T+E        PV N TVDFL  +S VKN  
Sbjct: 504 PIADFWSDPCLEFAIKTLTGALPVENASATDE-------GPVPNPTVDFLLEKSLVKNGS 563

Query: 140 ------------------------------------------------------------ 199
                                                                       
Sbjct: 564 GSCMNKKTQVNKKTKNKKELTSDHRSPSINGLKPELASDVTTCEQANLHSNGAFLTFNLA 623

Query: 200 ------------------------------------------------------------ 259
                                                                       
Sbjct: 624 DSGIHGEPQQKNEQCTTSSEISPVRGLRHPPPEVNTEQSNRTEGRNENRMVLHDQHQKLQ 683

[Close]

BLAST of MELO3C005647 vs. TAIR 10
Match: AT5G52230.1 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-11
Identity = 45/114 (39.47%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 63  ETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSN 122
           E  +K      +  D  +AD   DPC+ FAIKTLTG    E+    N P  S+  +P++N
Sbjct: 585 EVMEKSTNSFSSAFDSTLADLCKDPCIAFAIKTLTG----ESLCLLNTPAISS--NPINN 644

Query: 123 TT----VDFLQ------GQSSVKNEIPLSFPFGDSWADPCLDFAFKTLTGAIPI 167
            T    V F           S K   P   P  + W DPC+DFA KTLTGAIPI
Sbjct: 645 HTKQKGVSFTPETPGNVNTCSEKLVFPSPPPGANIWQDPCIDFAIKTLTGAIPI 692

[Close]

BLAST of MELO3C005647 vs. TAIR 10
Match: AT5G52230.2 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-11
Identity = 45/114 (39.47%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 63  ETEKKDDGKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSN 122
           E  +K      +  D  +AD   DPC+ FAIKTLTG    E+    N P  S+  +P++N
Sbjct: 585 EVMEKSTNSFSSAFDSTLADLCKDPCIAFAIKTLTG----ESLCLLNTPAISS--NPINN 644

Query: 123 TT----VDFLQ------GQSSVKNEIPLSFPFGDSWADPCLDFAFKTLTGAIPI 167
            T    V F           S K   P   P  + W DPC+DFA KTLTGAIPI
Sbjct: 645 HTKQKGVSFTPETPGNVNTCSEKLVFPSPPPGANIWQDPCIDFAIKTLTGAIPI 692

The following BLAST results are available for this feature:

BLAST of MELO3C005647 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042783.1	1.5e-122	65.81	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. ma...	[more]
XP_004143925.1	1.8e-99	57.44	methyl-CpG-binding domain-containing protein 13 [Cucumis sativus] >KGN50128.1 hy...	[more]
XP_038875367.1	5.5e-85	52.69	methyl-CpG-binding domain-containing protein 13-like isoform X1 [Benincasa hispi...	[more]
XP_038875370.1	5.5e-85	52.69	methyl-CpG-binding domain-containing protein 13-like isoform X3 [Benincasa hispi...	[more]
XP_038875371.1	5.5e-85	52.69	methyl-CpG-binding domain-containing protein 13-like isoform X4 [Benincasa hispi...	[more]

BLAST of MELO3C005647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTJ8	6.0e-10	39.47	Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO3C005647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7THL7	7.2e-123	65.81	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A0A0KKL3	8.5e-100	57.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154900 PE=4 SV=1	[more]
A0A6J1K6K6	4.9e-71	47.73	methyl-CpG-binding domain-containing protein 13-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E021	1.3e-68	46.34	uncharacterized protein LOC111026151 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1E0Z7	1.3e-68	46.34	uncharacterized protein LOC111026151 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MELO3C005647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52230.1	4.3e-11	39.47	methyl-CPG-binding domain protein 13	[more]
AT5G52230.2	4.3e-11	39.47	methyl-CPG-binding domain protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..258
None	No IPR available	PANTHER	PTHR34067:SF11	OS04G0193200 PROTEIN	coord: 18..250
IPR038945	Methyl-CpG-binding domain-containing protein 13-like	PANTHER	PTHR34067	OS04G0193200 PROTEIN	coord: 18..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005647.1	MELO3C005647.1	mRNA