MELO3C005644 (gene) Melon (DHL92) v4

Overview
NameMELO3C005644
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr09: 21897059 .. 21897298 (+)
RNA-Seq ExpressionMELO3C005644
SyntenyMELO3C005644
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTCATCGTCTCAACCTCCATCTTTTTGTCTTCATCATCGGACTTCTTATCGTCATTAGCCACGTCTCGGCGGTCACTACTACATCTGATCAAGACAAGAGCATTTTTAATCGTCGTTTTGGAGGAATAATATTTAACAAGAAGAAGGTGGGTGGTGGCGGCAGCCGCGACGGCGACGTTTTCAAAGATTCTCTACACCTTGTTCCGGAGGGTCCGGACCCTATTCATCATTAA

mRNA sequence

ATGGCCGCTCATCGTCTCAACCTCCATCTTTTTGTCTTCATCATCGGACTTCTTATCGTCATTAGCCACGTCTCGGCGGTCACTACTACATCTGATCAAGACAAGAGCATTTTTAATCGTCGTTTTGGAGGAATAATATTTAACAAGAAGAAGGTGGGTGGTGGCGGCAGCCGCGACGGCGACGTTTTCAAAGATTCTCTACACCTTGTTCCGGAGGGTCCGGACCCTATTCATCATTAA

Coding sequence (CDS)

ATGGCCGCTCATCGTCTCAACCTCCATCTTTTTGTCTTCATCATCGGACTTCTTATCGTCATTAGCCACGTCTCGGCGGTCACTACTACATCTGATCAAGACAAGAGCATTTTTAATCGTCGTTTTGGAGGAATAATATTTAACAAGAAGAAGGTGGGTGGTGGCGGCAGCCGCGACGGCGACGTTTTCAAAGATTCTCTACACCTTGTTCCGGAGGGTCCGGACCCTATTCATCATTAA

Protein sequence

MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDGDVFKDSLHLVPEGPDPIHH
Homology
BLAST of MELO3C005644 vs. NCBI nr
Match: KAA0042785.1 (hypothetical protein E6C27_scaffold44G002880 [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.2e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 60
          MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG
Sbjct: 13 MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 72

Query: 61 DVFKDSLHLVPEGPDPIHH 80
          DVFKDSLHLVPEGPDPIHH
Sbjct: 73 DVFKDSLHLVPEGPDPIHH 91

BLAST of MELO3C005644 vs. NCBI nr
Match: KGN50130.1 (hypothetical protein Csa_000151 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 8.0e-19
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGG--GGSR 60
          MAAH LNLHL VFIIGLLI++ HVSAV TTSDQ+K+ F RRF  +IFN KKVGG  GG+ 
Sbjct: 1  MAAHHLNLHLSVFIIGLLIIVGHVSAV-TTSDQNKNFFYRRFEEMIFNMKKVGGGTGGNN 60

Query: 61 DGDVFKDSLHLVPEGPDPIHH 80
          + +VF  SLHLVP GPD +HH
Sbjct: 61 NANVFGGSLHLVPNGPDALHH 80

BLAST of MELO3C005644 vs. NCBI nr
Match: KAE8647866.1 (hypothetical protein Csa_000489, partial [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 5.9e-14
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVG--GGGSR 60
          MAAHRLNLHL VFIIGLLIV+ HVSAV TTSDQ+KSIF RRFGG++FNKK  G  GGG  
Sbjct: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAV-TTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHN 60

Query: 61 DGDVF 64
          D +VF
Sbjct: 61 DANVF 64

BLAST of MELO3C005644 vs. NCBI nr
Match: KAA0039672.1 (hypothetical protein E6C27_scaffold558G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-08
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 60
          MAAHRLN HL + IIGLLI++ HV+A T TSD +K  F RRFG +I+ +K +  GG  DG
Sbjct: 1  MAAHRLNFHLAIVIIGLLILVGHVTA-TITSDHNKINFYRRFGRMIYKEKNM--GGYHDG 60

Query: 61 DVFKDSLHLVPEGPDP 77
           VF  SL  VP  P P
Sbjct: 61 -VFGGSLTQVPAEPGP 72

BLAST of MELO3C005644 vs. NCBI nr
Match: XP_023550529.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 53.5 bits (127), Expect = 9.5e-04
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 9  HLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDGDVFKDSLH 68
          H FV  IGLL+V++H  AVT+    D+S+F  RFGG I  K K+ G      D F  SL 
Sbjct: 4  HHFVIFIGLLMVVTHAPAVTS----DQSLFYPRFGG-ISTKMKMSG-----VDFFGRSLP 63

Query: 69 LVPEGPDPIHH 80
          +VP GPDPIH+
Sbjct: 64 VVPGGPDPIHN 64

BLAST of MELO3C005644 vs. ExPASy TrEMBL
Match: A0A5A7TN00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002880 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 60
          MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG
Sbjct: 13 MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 72

Query: 61 DVFKDSLHLVPEGPDPIHH 80
          DVFKDSLHLVPEGPDPIHH
Sbjct: 73 DVFKDSLHLVPEGPDPIHH 91

BLAST of MELO3C005644 vs. ExPASy TrEMBL
Match: A0A0A0KQY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155420 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20
Identity = 58/81 (71.60%), Postives = 66/81 (81.48%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVG--GGGSR 60
          MAAHRLNLHL VFIIGLLIV+ HVSAV TTSDQ+KSIF RRFGG++FNKK  G  GGG  
Sbjct: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAV-TTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHN 60

Query: 61 DGDVFKDSLHLVPEGPDPIHH 80
          D +VF  SLHLVP  P+P+H+
Sbjct: 61 DANVFGGSLHLVPNSPNPLHN 80

BLAST of MELO3C005644 vs. ExPASy TrEMBL
Match: A0A0A0KKB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155410 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-19
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGG--GGSR 60
          MAAH LNLHL VFIIGLLI++ HVSAV TTSDQ+K+ F RRF  +IFN KKVGG  GG+ 
Sbjct: 1  MAAHHLNLHLSVFIIGLLIIVGHVSAV-TTSDQNKNFFYRRFEEMIFNMKKVGGGTGGNN 60

Query: 61 DGDVFKDSLHLVPEGPDPIHH 80
          + +VF  SLHLVP GPD +HH
Sbjct: 61 NANVFGGSLHLVPNGPDALHH 80

BLAST of MELO3C005644 vs. ExPASy TrEMBL
Match: A0A5A7T872 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00020 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0

Query: 1  MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 60
          MAAHRLN HL + IIGLLI++ HV+A T TSD +K  F RRFG +I+ +K +  GG  DG
Sbjct: 1  MAAHRLNFHLAIVIIGLLILVGHVTA-TITSDHNKINFYRRFGRMIYKEKNM--GGYHDG 60

Query: 61 DVFKDSLHLVPEGPDP 77
           VF  SL  VP  P P
Sbjct: 61 -VFGGSLTQVPAEPGP 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0042785.17.2e-36100.00hypothetical protein E6C27_scaffold44G002880 [Cucumis melo var. makuwa][more]
KGN50130.18.0e-1967.90hypothetical protein Csa_000151 [Cucumis sativus][more]
KAE8647866.15.9e-1475.38hypothetical protein Csa_000489, partial [Cucumis sativus][more]
KAA0039672.12.8e-0855.26hypothetical protein E6C27_scaffold558G00020 [Cucumis melo var. makuwa][more]
XP_023550529.19.5e-0449.30vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TN003.5e-36100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KQY01.6e-2071.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155420 PE=4 SV=1[more]
A0A0A0KKB33.9e-1967.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155410 PE=4 SV=1[more]
A0A5A7T8721.4e-0855.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005644.1MELO3C005644.1mRNA