MELO3C005460 (gene) Melon (DHL92) v4

Overview
NameMELO3C005460
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr09: 20501870 .. 20502796 (-)
RNA-Seq ExpressionMELO3C005460
SyntenyMELO3C005460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGTTTGGATAAAATCACAACTGATTGGACAAATAAACGAAGATTCATAAAAAGAAAATCCAACCGTAAAGCCTTAAATTAGTTATCTAATATTCATTGATCCAAAGTACAGAGACCAAAAACAATAAGGATGAAGAATGACAGCGTTTAAACCTGTATTTCATCAGTTCTTCAACCAGTAATCTGAATGAAATTCTATCAGCAAAGAAAATCGAGAACACAGCTAAAGCACACACAGGTTTGGAAATCAGTTGAAATTCTATGACTATTTTTTCTTTCGATAATTGTTTCACCAAAAGAAAGAAAAAAGAGAATCGAAATGAAAATTTTCATCAGTGAAAAAAAAAATATCAAGAACACAGTTGAATTAAAAATTGAAAACGAAATTACAGGAAATTGAAATATCATTAGCCAAGAATACGAGACGATGCTTTTTCTCCTTTCGATAATTCCATCATTAAATCCAAAAACAGAAAATCGGAACGAAATTAAAGCGCGTTGGAAAACAGATTGAAATCATCAGAAAACGAAGGACCAGAGCAAGAATAGAAAACAGAATCAGGCCTCAGACAGAGTGTTCTCAGTCATAAAATTATCAGACAATGTAGGCAAATCAAAATATCAATCATCACCGGCCTGATTCAGCAAGAAGAAAGAGAAATGAAAACAAGGAGAAAAGAGAAAAATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACAGCGATCTTCTTCACTCGCAAGAAAATACAAAATCAAAAGCTTACATAAAAAAGAAGAAAAAAAAGTTGAAAGAGGAAACAGCTTCGGCAACGAAGGCGCTGTGTGATTGA

mRNA sequence

GAAGTTTGGATAAAATCACAACTGATTGGACAAATAAACGAAGATTCATAAAAAGAAAATCCAACCGTAAAGCCTTAAATTAGTTATCTAATATTCATTGATCCAAAGTACAGAGACCAAAAACAATAAGGATGAAGAATGACAGCGTTTAAACCTGTATTTCATCAGTTCTTCAACCAGTAATCTGAATGAAATTCTATCAGCAAAGAAAATCGAGAACACAGCTAAAGCACACACAGGTTTGGAAATCAGTTGAAATTCTATGACTATTTTTTCTTTCGATAATTGTTTCACCAAAAGAAAGAAAAAAGAGAATCGAAATGAAAATTTTCATCAGTGAAAAAAAAAATATCAAGAACACAGTTGAATTAAAAATTGAAAACGAAATTACAGGAAATTGAAATATCATTAGCCAAGAATACGAGACGATGCTTTTTCTCCTTTCGATAATTCCATCATTAAATCCAAAAACAGAAAATCGGAACGAAATTAAAGCGCGTTGGAAAACAGATTGAAATCATCAGAAAACGAAGGACCAGAGCAAGAATAGAAAACAGAATCAGGCCTCAGACAGAGTGTTCTCAGTCATAAAATTATCAGACAATGTAGGCAAATCAAAATATCAATCATCACCGGCCTGATTCAGCAAGAAGAAAGAGAAATGAAAACAAGGAGAAAAGAGAAAAATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACAGCGATCTTCTTCACTCGCAAGAAAATACAAAATCAAAAGCTTACATAAAAAAGAAGAAAAAAAAGTTGAAAGAGGAAACAGCTTCGGCAACGAAGGCGCTGTGTGATTGA

Coding sequence (CDS)

ATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACAGCGATCTTCTTCACTCGCAAGAAAATACAAAATCAAAAGCTTACATAAAAAAGAAGAAAAAAAAGTTGAAAGAGGAAACAGCTTCGGCAACGAAGGCGCTGTGTGA

Protein sequence

MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSQRSSSLARKYKIKSLHKKEEKKVERGNSFGNEGAV
Homology
[Close]
BLAST of MELO3C005460 vs. NCBI nr
Match: KGN50326.1 (hypothetical protein Csa_000200 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 57/68 (83.82%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSQRSSSLARKYKIKSLHK 60
          MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESS+RS+SLARKYK+KS+ +
Sbjct: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60

Query: 61 KEEKKVER 69
          +EE+  +R
Sbjct: 61 EEEEDWKR 68

[Close]
BLAST of MELO3C005460 vs. ExPASy TrEMBL
Match: A0A0A0KRH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167180 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.9e-20
Identity = 57/68 (83.82%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSQRSSSLARKYKIKSLHK 60
          MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESS+RS+SLARKYK+KS+ +
Sbjct: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60

Query: 61 KEEKKVER 69
          +EE+  +R
Sbjct: 61 EEEEDWKR 68

The following BLAST results are available for this feature:
BLAST of MELO3C005460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50326.11.2e-1983.82hypothetical protein Csa_000200 [Cucumis sativus][more]
BLAST of MELO3C005460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C005460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRH65.9e-2083.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167180 PE=4 SV=1[more]
BLAST of MELO3C005460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005460.1MELO3C005460.1mRNA