MELO3C005219 (gene) Melon (DHL92) v4

Overview
NameMELO3C005219
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr09: 17498218 .. 17498628 (+)
RNA-Seq ExpressionMELO3C005219
SyntenyMELO3C005219
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACTCACCAGAGAAAGGTCATCGTCATGAGGGAGAGAAAGGAAGAAAGGGGGGACAGGAGGAGGACCGGATGGAGTAGAGAAGGAGAAAAGGGGGAAGTAGCGAAGGGAGTTGAGTTCTCTAAGAATAACAAGACAAGAGAGGGAAATGGCAGTGAAGAGAAGAAGAATGTGAAGAGAACAGCGGAAGGAGTAGTAAATAAACATGGCGGAAATGTAAGAAGAATTAAGAAGGCAGCAGAGATGATAGGCATTACATTACAATTACAGGGGGGAATGAATGAGAAAGGTCTAGGGTTGAAGATCCCAACAGAAAAAGGATCATATTCGTCGAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGAATCAAGAGTTTATAGGCGCTTTGTAGAGTGGAAGAGTGTGTAG

mRNA sequence

ATGCAAACTCACCAGAGAAAGGTCATCGTCATGAGGGAGAGAAAGGAAGAAAGGGGGGACAGGAGGAGGACCGGATGGAGTAGAGAAGGAGAAAAGGGGGAAGTAGCGAAGGGAGTTGAGTTCTCTAAGAATAACAAGACAAGAGAGGGAAATGGCAGTGAAGAGAAGAAGAATGTGAAGAGAACAGCGGAAGGAGTAGTAAATAAACATGGCGGAAATGTAAGAAGAATTAAGAAGGCAGCAGAGATGATAGGCATTACATTACAATTACAGGGGGGAATGAATGAGAAAGGTCTAGGGTTGAAGATCCCAACAGAAAAAGGATCATATTCGTCGAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGAATCAAGAGTTTATAGGCGCTTTGTAGAGTGGAAGAGTGTGTAG

Coding sequence (CDS)

ATGCAAACTCACCAGAGAAAGGTCATCGTCATGAGGGAGAGAAAGGAAGAAAGGGGGGACAGGAGGAGGACCGGATGGAGTAGAGAAGGAGAAAAGGGGGAAGTAGCGAAGGGAGTTGAGTTCTCTAAGAATAACAAGACAAGAGAGGGAAATGGCAGTGAAGAGAAGAAGAATGTGAAGAGAACAGCGGAAGGAGTAGTAAATAAACATGGCGGAAATGTAAGAAGAATTAAGAAGGCAGCAGAGATGATAGGCATTACATTACAATTACAGGGGGGAATGAATGAGAAAGGTCTAGGGTTGAAGATCCCAACAGAAAAAGGATCATATTCGTCGAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGAATCAAGAGTTTATAGGCGCTTTGTAGAGTGGAAGAGTGTGTAG

Protein sequence

MQTHQRKVIVMRERKEERGDRRRTGWSREGEKGEVAKGVEFSKNNKTREGNGSEEKKNVKRTAEGVVNKHGGNVRRIKKAAEMIGITLQLQGGMNEKGLGLKIPTEKGSYSSKERGGGGGGGESRVYRRFVEWKSV
Homology
[Close]
BLAST of MELO3C005219 vs. NCBI nr
Match: KGN49755.1 (hypothetical protein Csa_017805 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05
Identity = 35/46 (76.09%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 83  MIGITLQLQGGMNEKGLGLKIPTEKGSYSSKERGGGGGGGESRVYR 129
           MIGIT  +QGGMN KGLGLKI TEK  Y  KERG  GGGGESRVYR
Sbjct: 1   MIGIT--MQGGMNGKGLGLKIRTEKRPYWWKERGRRGGGGESRVYR 44

[Close]
BLAST of MELO3C005219 vs. ExPASy TrEMBL
Match: A0A0A0KJ43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G107040 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.4e-06
Identity = 35/46 (76.09%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 83  MIGITLQLQGGMNEKGLGLKIPTEKGSYSSKERGGGGGGGESRVYR 129
           MIGIT  +QGGMN KGLGLKI TEK  Y  KERG  GGGGESRVYR
Sbjct: 1   MIGIT--MQGGMNGKGLGLKIRTEKRPYWWKERGRRGGGGESRVYR 44

The following BLAST results are available for this feature:
BLAST of MELO3C005219 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49755.11.3e-0576.09hypothetical protein Csa_017805 [Cucumis sativus][more]
BLAST of MELO3C005219 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C005219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ436.4e-0676.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G107040 PE=4 SV=1[more]
BLAST of MELO3C005219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005219.1MELO3C005219.1mRNA