MELO3C005120.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TGCCGTACAACCATGAACCACCACTGGAATCAAATCCGCTGCCTTGTGCATCCACGAAAGAGAACAATCGAAAACCAATCAGGTTTGTGAATCAAAATCCTTTTTAATTCATTCTCCATTCTCCGACTCAAATTTTTTCTGTTCATGTTTTTTGTTACTGACTTCGATTTCATTCCACTGAATCTTCTTCACCTTCTTCCTTATTTCGTTTTCTAGATACAATTCTGTGCTCGCCATTCAATTTGGCGATCCTTCCATTGAATCTTAACCTAGTTTACTCTGAATCTTCCCTTAGTTGTTCAGCAGTACTTTGATGGCGCTGAATCTTTTGATTTAATGCGTAATTTTCATGTTGCTTTCTTGATAATTCTATAGGTTAGGAACGAGAAACTGTAATCAGACCTCGACGGGATGGCAGCGTCCGCAAAAACTGTCGCCATTCCAGATCAGTCAAATAATGGTGACTGGACGGTTGTTCTTCCACGTCGTGGCAAGCAGAGGAAAAATTTCCCGAAGCTCAGGAATCGAGAAGATCAACGGACTTGGTCTCCCACTGATCAGGCTAATGATACAATTAGAGAATCAAAACTGTTGCAGAAGATGGAAATGTGTATCAAAAAACTTGAGAGTTCCCAATTTTATCGAACTCTTGTAGAGGAGCTTGAAACAGTGCCATTCTTGGAATCGTTAAATAGGGTTTTGGACTCGGAGTCAAAGATGGGGGTGGTTATCTATGGCGTAGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCGATATTGTTGAAGAGAAAATTTAGTTGGATTGAAAGTTTGGAGGTGTTTGATCCAATTCTTTCTGCAACTGAATGTCGATTAATGGAATCCTTTGGTTGTTCTGTTCTATCAGTTAATGAACAAGGAAGACGATGTGCAGAGAAGCCAACGATGTTCTTCATGCCCCATTGTGAAGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGAAGGTGAAGCTGTTGAATCATATTATGTTGTTTGGGAATAGCTTTGAGATTTATGAACAGTTTGTATCTGAATTCAAGAACTCACCCGTTGTTGATTCATCAAATTTCATCTTGGCCTCGAGAAAGTTCGTGCGGGAGATCAAAATCAAGACAGTTTCAGATGATTATTTTGGTGCATTTCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTTCACCACTGGAGCTGAAATTCATAGATCTTTGAAGGACATTGCTTGGTGATTGAATAAACAGCCAGGTAAATTCATTGTCATGATTGAACATGGATTTTGTTCTTTATCTCAAAAATTTGGTAAAATGCCAAATATAGGAGTGTTTATCGCTTGTGCCAAACTTGACTCACTTTCCTCAGTATGGTAATAATTTCGTTCCACACCCAGACAATCTCAAGGACATGACTGTATGAGTGGTGTAACCTATAGAACAGATCCCGTCCAAGGCCGTAAGAGAATCATGTTCTAAGATATGCTACTGCTAGGGAACAGCCTCCCCGAGAGTCGAGATTAGCGATTTACATTACTTTATGATGACCATATTTTTCTCATTTTTAGGCGTAGATTGATCTTTATATCACAACTATGATGGACCGAGGGTTCACTAGGTAGTGCTACTGCTAAGGTAGGTAAACAAATGTAGTTATTTTTGCTAAGGATATTGATGAACATGAACTCGCTATACTTGATCAATTATTTGATTTGAATATCATTTTAGACCTTGATATGCTTTTAGGATTGAAATTGAATCATATGTATAGTTTCTAAGTTGATAAAGATCTTTACATATAAATCAAGGTCCCAAAACCAGATCTCTTAGCTTCTAAGGGTCCGTTTGGA TGCCGTACAACCATGAACCACCACTGGAATCAAATCCGCTGCCTTGTGCATCCACGAAAGAGAACAATCGAAAACCAATCAGGTTAGGAACGAGAAACTGTAATCAGACCTCGACGGGATGGCAGCGTCCGCAAAAACTGTCGCCATTCCAGATCAGTCAAATAATGGTGACTGGACGGTTGTTCTTCCACGTCGTGGCAAGCAGAGGAAAAATTTCCCGAAGCTCAGGAATCGAGAAGATCAACGGACTTGGTCTCCCACTGATCAGGCTAATGATACAATTAGAGAATCAAAACTGTTGCAGAAGATGGAAATGTGTATCAAAAAACTTGAGAGTTCCCAATTTTATCGAACTCTTGTAGAGGAGCTTGAAACAGTGCCATTCTTGGAATCGTTAAATAGGGTTTTGGACTCGGAGTCAAAGATGGGGGTGGTTATCTATGGCGTAGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCGATATTGTTGAAGAGAAAATTTAGTTGGATTGAAAGTTTGGAGGTGTTTGATCCAATTCTTTCTGCAACTGAATGTCGATTAATGGAATCCTTTGGTTGTTCTGTTCTATCAGTTAATGAACAAGGAAGACGATGTGCAGAGAAGCCAACGATGTTCTTCATGCCCCATTGTGAAGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGAAGGTGAAGCTGTTGAATCATATTATGTTGTTTGGGAATAGCTTTGAGATTTATGAACAGTTTGTATCTGAATTCAAGAACTCACCCGTTGTTGATTCATCAAATTTCATCTTGGCCTCGAGAAAGTTCGTGCGGGAGATCAAAATCAAGACAGTTTCAGATGATTATTTTGGTGCATTTCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTTCACCACTGGAGCTGAAATTCATAGATCTTTGAAGGACATTGCTTGGTGATTGAATAAACAGCCAGGTAAATTCATTGTCATGATTGAACATGGATTTTGTTCTTTATCTCAAAAATTTGGTAAAATGCCAAATATAGGAGTGTTTATCGCTTGTGCCAAACTTGACTCACTTTCCTCAGTATGGTAATAATTTCGTTCCACACCCAGACAATCTCAAGGACATGACTGTATGAGTGGTGTAACCTATAGAACAGATCCCGTCCAAGGCCGTAAGAGAATCATGTTCTAAGATATGCTACTGCTAGGGAACAGCCTCCCCGAGAGTCGAGATTAGCGATTTACATTACTTTATGATGACCATATTTTTCTCATTTTTAGGCGTAGATTGATCTTTATATCACAACTATGATGGACCGAGGGTTCACTAGGTAGTGCTACTGCTAAGGTAGGTAAACAAATGTAGTTATTTTTGCTAAGGATATTGATGAACATGAACTCGCTATACTTGATCAATTATTTGATTTGAATATCATTTTAGACCTTGATATGCTTTTAGGATTGAAATTGAATCATATGTATAGTTTCTAAGTTGATAAAGATCTTTACATATAAATCAAGGTCCCAAAACCAGATCTCTTAGCTTCTAAGGGTCCGTTTGGA ATGGCAGCGTCCGCAAAAACTGTCGCCATTCCAGATCAGTCAAATAATGGTGACTGGACGGTTGTTCTTCCACGTCGTGGCAAGCAGAGGAAAAATTTCCCGAAGCTCAGGAATCGAGAAGATCAACGGACTTGGTCTCCCACTGATCAGGCTAATGATACAATTAGAGAATCAAAACTGTTGCAGAAGATGGAAATGTGTATCAAAAAACTTGAGAGTTCCCAATTTTATCGAACTCTTGTAGAGGAGCTTGAAACAGTGCCATTCTTGGAATCGTTAAATAGGGTTTTGGACTCGGAGTCAAAGATGGGGGTGGTTATCTATGGCGTAGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCGATATTGTTGAAGAGAAAATTTAGTTGGATTGAAAGTTTGGAGGTGTTTGATCCAATTCTTTCTGCAACTGAATGTCGATTAATGGAATCCTTTGGTTGTTCTGTTCTATCAGTTAATGAACAAGGAAGACGATGTGCAGAGAAGCCAACGATGTTCTTCATGCCCCATTGTGAAGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGAAGGTGAAGCTGTTGAATCATATTATGTTGTTTGGGAATAGCTTTGAGATTTATGAACAGTTTGTATCTGAATTCAAGAACTCACCCGTTGTTGATTCATCAAATTTCATCTTGGCCTCGAGAAAGTTCGTGCGGGAGATCAAAATCAAGACAGTTTCAGATGATTATTTTGGTGCATTTCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTTCACCACTGGAGCTGAAATTCATAGATCTTTGA MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKLLQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFMPHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFVREIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL Homology
BLAST of MELO3C005120.jh1 vs. NCBI nr
Match: XP_008465606.1 (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo] >KAA0066058.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo var. makuwa] >TYJ99839.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo var. makuwa]) HSP 1 Score: 554 bits (1428), Expect = 5.03e-199 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. NCBI nr
Match: XP_004143755.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741082.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741084.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741085.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741086.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741087.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741088.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >XP_031741089.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus] >KAE8648469.1 hypothetical protein Csa_008043 [Cucumis sativus]) HSP 1 Score: 521 bits (1342), Expect = 6.49e-186 Identity = 258/277 (93.14%), Postives = 270/277 (97.47%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. NCBI nr
Match: XP_038876148.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida] >XP_038876149.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida] >XP_038876150.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida]) HSP 1 Score: 498 bits (1283), Expect = 6.37e-177 Identity = 246/277 (88.81%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. NCBI nr
Match: KAG6579107.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 498 bits (1281), Expect = 1.29e-176 Identity = 243/277 (87.73%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. NCBI nr
Match: XP_023550156.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550157.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550158.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550159.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497 bits (1279), Expect = 2.59e-176 Identity = 242/277 (87.36%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy Swiss-Prot
Match: Q8GWZ6 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2) HSP 1 Score: 271.9 bits (694), Expect = 7.8e-72 Identity = 135/260 (51.92%), Postives = 193/260 (74.23%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy Swiss-Prot
Match: Q9UH36 (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.0e-18 Identity = 64/177 (36.16%), Postives = 96/177 (54.24%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy Swiss-Prot
Match: Q8K2M3 (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4) HSP 1 Score: 95.1 bits (235), Expect = 1.3e-18 Identity = 71/218 (32.57%), Postives = 111/218 (50.92%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy Swiss-Prot
Match: Q9VEB5 (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.0e-10 Identity = 55/201 (27.36%), Postives = 96/201 (47.76%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VEC7 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00470 PE=3 SV=1) HSP 1 Score: 554 bits (1428), Expect = 2.44e-199 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CQQ4 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC103503243 PE=3 SV=1) HSP 1 Score: 554 bits (1428), Expect = 2.44e-199 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KRU2 (SRR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G457240 PE=3 SV=1) HSP 1 Score: 521 bits (1342), Expect = 3.26e-184 Identity = 258/277 (93.14%), Postives = 270/277 (97.47%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FGU7 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC111445349 PE=3 SV=1) HSP 1 Score: 496 bits (1277), Expect = 2.53e-176 Identity = 242/277 (87.36%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JWJ0 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111488981 PE=3 SV=1) HSP 1 Score: 486 bits (1250), Expect = 3.30e-172 Identity = 237/277 (85.56%), Postives = 259/277 (93.50%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. TAIR 10
Match: AT5G59560.1 (sensitivity to red light reduced protein (SRR1) ) HSP 1 Score: 271.9 bits (694), Expect = 5.5e-73 Identity = 135/260 (51.92%), Postives = 193/260 (74.23%), Query Frame = 0
BLAST of MELO3C005120.jh1 vs. TAIR 10
Match: AT5G59560.2 (sensitivity to red light reduced protein (SRR1) ) HSP 1 Score: 271.9 bits (694), Expect = 5.5e-73 Identity = 135/260 (51.92%), Postives = 193/260 (74.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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