MELO3C005013 (gene) Melon (DHL92) v4

Overview


Name	MELO3C005013
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	LOB domain-containing protein
Location	chr12: 4561282 .. 4562282 (-)
RNA-Seq Expression	MELO3C005013
Synteny	MELO3C005013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGTTTTAATTAGGCCGTTATTGATTGGACCTTTCCCTTTGCCTATTTATGCTTACTTGGTTTGGGTTCCGATCAATTAGTCCCATCTCTCCGCCGGCTAAAATATGAAGAAAAGTGAAGAAGCAAATACGGCGTCGGCGGTGGTGGTGATGGGTAGTACTCAGCCGTGTGCGGCTTGTAAAATTCTCCGGCGGAGATGCCGAGAGAATTGTGAATTAGGGCCGTATTTTCCTCCAATGGAACCTCTCAAATTCACTATTGCCCATAGAGTCTTTGGTGCTAGCAACATTATCAAGTTGCTTCAGGTAACCTTTTCTATTCCCAACAAACTTTTCGTTTCTTCTTTTCTTTTTTTTTTTTTTTATTATTTTTTTTTCAAAATTAGATGATTTCAAATTCTTATTTTGTTTTATTTTTAATGTAAATAGCACTATAATTTGTGTGTGTTGTGTGTTTATATTTTACCTTCACATTCCTCAAATGCGTTAGCAACTATGAAAAATATATGATTCAATTTAACTCCCTCAACCCTTAGTGTTAAAAAAGGCTAGAAACTTATTATTTAAATATTATTGTTTTAATGATCGTCGTCCGTGGAAAAAACAATTTTTACTAATCCCTAAGAGGAAAAATATGAGAATCTTTAATCTCGTATTGAATTTGTTAGAATCTTCCGAAATCGCAAAGAGCAGATGCTGTGAACAGCATGGTATATGAAGCAAGTGCAAGAATAAGAGATCCTATTTATGGATGTGCGGGCTCAATTTTCCATCTCCAAAGACAAATAAATGACCTACAAATAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAGAATGCATTGTCAACAAGCCAATTTAATGACTCTAATTTGCAAGGAATTGGGTCAAATGCCAGAACCACCCATGCATGACCATTACAACATTGCTAGCCCTCAAGGTTATTACTCCTATTCATACTTATTTGAGGAGAGTAATGTTTTGGAGCCCCTGTGGACTTGA

mRNA sequence

GTCGTTTTAATTAGGCCGTTATTGATTGGACCTTTCCCTTTGCCTATTTATGCTTACTTGGTTTGGGTTCCGATCAATTAGTCCCATCTCTCCGCCGGCTAAAATATGAAGAAAAGTGAAGAAGCAAATACGGCGTCGGCGGTGGTGGTGATGGGTAGTACTCAGCCGTGTGCGGCTTGTAAAATTCTCCGGCGGAGATGCCGAGAGAATTGTGAATTAGGGCCGTATTTTCCTCCAATGGAACCTCTCAAATTCACTATTGCCCATAGAGTCTTTGGTGCTAGCAACATTATCAAGTTGCTTCAGAATCTTCCGAAATCGCAAAGAGCAGATGCTGTGAACAGCATGGTATATGAAGCAAGTGCAAGAATAAGAGATCCTATTTATGGATGTGCGGGCTCAATTTTCCATCTCCAAAGACAAATAAATGACCTACAAATAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAGAATGCATTGTCAACAAGCCAATTTAATGACTCTAATTTGCAAGGAATTGGGTCAAATGCCAGAACCACCCATGCATGACCATTACAACATTGCTAGCCCTCAAGGTTATTACTCCTATTCATACTTATTTGAGGAGAGTAATGTTTTGGAGCCCCTGTGGACTTGA

Coding sequence (CDS)

ATGAAGAAAAGTGAAGAAGCAAATACGGCGTCGGCGGTGGTGGTGATGGGTAGTACTCAGCCGTGTGCGGCTTGTAAAATTCTCCGGCGGAGATGCCGAGAGAATTGTGAATTAGGGCCGTATTTTCCTCCAATGGAACCTCTCAAATTCACTATTGCCCATAGAGTCTTTGGTGCTAGCAACATTATCAAGTTGCTTCAGAATCTTCCGAAATCGCAAAGAGCAGATGCTGTGAACAGCATGGTATATGAAGCAAGTGCAAGAATAAGAGATCCTATTTATGGATGTGCGGGCTCAATTTTCCATCTCCAAAGACAAATAAATGACCTACAAATAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAGAATGCATTGTCAACAAGCCAATTTAATGACTCTAATTTGCAAGGAATTGGGTCAAATGCCAGAACCACCCATGCATGACCATTACAACATTGCTAGCCCTCAAGGTTATTACTCCTATTCATACTTATTTGAGGAGAGTAATGTTTTGGAGCCCCTGTGGACTTGA

Protein sequence

MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT

Homology

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BLAST of MELO3C005013 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-46
Identity = 98/195 (50.26%), Postives = 127/195 (65.13%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGST------------QPCAACKILRRRCRENCELGPYFPPMEPL 60
           M+   +A+ A+  ++  S+             PCAACKILRRRC E C L PYFPP +P 
Sbjct: 1   MESKSDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 60

Query: 61  KFTIAHRVFGASNIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQIN 120
           KFTIAHRVFGASNIIK LQ LP+SQR DAVNSMVYEA ARIRDP+YGCAG+I+HLQRQ++
Sbjct: 61  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 120

Query: 121 DLQIELAKAQAEVLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEE 178
           +LQ +LAKAQ E++ M  Q++NL+ LI      M +    +  N++         +L ++
Sbjct: 121 ELQAQLAKAQVEMVNMQFQRSNLLELIY----NMDQQQKQEQDNMSFESN--DLGFLEDK 180

[Close]

BLAST of MELO3C005013 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.7e-44
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC + C L PYFPP +P KFTIAHRVFGASNIIK LQ LP+SQR DAVNS
Sbjct: 55  PCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNS 114

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 136
           MVYEA AR+RDP+YGCAG+I+HLQRQ+++LQ +LAK Q E++ M  Q+++L+ LI
Sbjct: 115 MVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]

BLAST of MELO3C005013 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-37
Identity = 76/163 (46.63%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 17  GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRAD 76
           G+  PCAACK+LRRRC ++C   PYFP  EP KF   HRVFGASN+ K+LQ LP  QR D
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 77  AVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMT--L 136
           AV+SMVYEA+AR+RDP+YGC G+I  LQ+QI+ LQ +LA AQAEV+ +  +Q+       
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 137 ICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 178
           +C +       P     +    +G +S+  + +E+++ E +W+
Sbjct: 129 LCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of MELO3C005013 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-35
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 19  TQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAV 78
           + PCA+CK+LRRRC ++C   PYFPP +P KF I H+VFGASN+ K+LQ LP  QRADAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 79  NSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQ 128
           NS+V+EA+AR+RDP+YGC G+I +LQ Q++ LQ++LA AQAE+L +  Q
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of MELO3C005013 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-32
Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 16  MGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRA 75
           + +  PCAACK+LRRRC + C   PYF P EP KF   H+VFGASN+ K+L  +P+SQRA
Sbjct: 40  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRA 99

Query: 76  DAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 135
           DA NS+VYEA+ R+RDP+YGC G+I  LQ+Q+  LQ EL   ++E+L+ + Q+  + TLI
Sbjct: 100 DAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILK-YKQREAVATLI 159

Query: 136 CKELGQM 143
                Q+
Sbjct: 160 VPSNSQV 165

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BLAST of MELO3C005013 vs. NCBI nr
Match: XP_008463578.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0051930.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK12232.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 364.8 bits (935), Expect = 4.3e-97
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 178
           VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 177

[Close]

BLAST of MELO3C005013 vs. NCBI nr
Match: XP_004147298.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN64754.1 hypothetical protein Csa_014184 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.6e-83
Identity = 157/183 (85.79%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           M+KS E NTAS  VV+GS+ PCAACKILRRRCRENCELGPYFP MEPLKFTIAHRVFGAS
Sbjct: 1   MEKSAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQ+LP+SQR DAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQ ELAKAQAE
Sbjct: 61  NIIKLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDH------YNIASPQGYYSYSYLFEESNVLEP 178
           VLRMHCQQANLMTLI KELGQ+P+PPMHDH      YNIASPQ Y+SYSYLFEE NVLEP
Sbjct: 121 VLRMHCQQANLMTLIWKELGQVPQPPMHDHQSLNDPYNIASPQSYHSYSYLFEECNVLEP 180

[Close]

BLAST of MELO3C005013 vs. NCBI nr
Match: XP_038893916.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 295.4 bits (755), Expect = 3.2e-76
Identity = 148/183 (80.87%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           M+KS E NTA+A     +  PCAACKILRRRCRENCELGPYFPP EPLKFTIAHR+FGAS
Sbjct: 1   MEKS-EPNTAAATT---AVSPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHRIFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQ+LPKSQR DAVNSMVYEASARIRDPIYGCAGSIF LQRQINDLQ ELAKAQAE
Sbjct: 61  NIIKLLQDLPKSQREDAVNSMVYEASARIRDPIYGCAGSIFQLQRQINDLQGELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDH------YNIASPQGYYSYSYLFEESNVLEP 178
           +L+M CQQANLMTLICKEL QMP+PPM+DH      YNIASPQ Y+S SYLFE+SN+LEP
Sbjct: 121 ILKMQCQQANLMTLICKELAQMPQPPMYDHQSLNDNYNIASPQSYHSSSYLFEDSNILEP 179

[Close]

BLAST of MELO3C005013 vs. NCBI nr
Match: XP_038895012.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-60
Identity = 115/165 (69.70%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +PLKFTIAHRVFGASNIIKLLQ+LP+SQRADAV+S
Sbjct: 38  PCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSS 97

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEA+ARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ +HC+QANL+ LICKEL 
Sbjct: 98  LVYEANARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCRQANLVALICKELT 157

Query: 141 QMPEP--PMHDH------YNIASPQGYYSYSYLFEESNVLEPLWT 178
           Q+P P  P+ DH      +NIA+PQ Y  Y+ LFE+SN+ +PLWT
Sbjct: 158 QLPPPMSPLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 202

[Close]

BLAST of MELO3C005013 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-58
Identity = 114/164 (69.51%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +P KFTIAHRVFGASNIIKLLQ+LP+SQRADAV+S
Sbjct: 38  PCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSS 97

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEASARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ MHC QA+L+ LICKEL 
Sbjct: 98  LVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELA 157

Query: 141 QMPEP-PMHDH------YNIASPQGYYSYSYLFEESNVLEPLWT 178
           Q P P P  DH      +NIA+PQ Y +Y+   E+SN+ EPLWT
Sbjct: 158 QTPPPVPPPDHRSLDNNFNIATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of MELO3C005013 vs. ExPASy TrEMBL
Match: A0A5D3CLP6 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00360 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 178
           VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 177

[Close]

BLAST of MELO3C005013 vs. ExPASy TrEMBL
Match: A0A1S3CK31 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 178
           VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 177

[Close]

BLAST of MELO3C005013 vs. ExPASy TrEMBL
Match: A0A0A0LUS4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.7e-84
Identity = 157/183 (85.79%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           M+KS E NTAS  VV+GS+ PCAACKILRRRCRENCELGPYFP MEPLKFTIAHRVFGAS
Sbjct: 1   MEKSAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQ+LP+SQR DAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQ ELAKAQAE
Sbjct: 61  NIIKLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDH------YNIASPQGYYSYSYLFEESNVLEP 178
           VLRMHCQQANLMTLI KELGQ+P+PPMHDH      YNIASPQ Y+SYSYLFEE NVLEP
Sbjct: 121 VLRMHCQQANLMTLIWKELGQVPQPPMHDHQSLNDPYNIASPQSYHSYSYLFEECNVLEP 180

[Close]

BLAST of MELO3C005013 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.5e-59
Identity = 114/164 (69.51%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +P KFTIAHRVFGASNIIKLLQ+LP+SQRADAV+S
Sbjct: 38  PCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSS 97

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEASARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ MHC QA+L+ LICKEL 
Sbjct: 98  LVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELA 157

Query: 141 QMPEP-PMHDH------YNIASPQGYYSYSYLFEESNVLEPLWT 178
           Q P P P  DH      +NIA+PQ Y +Y+   E+SN+ EPLWT
Sbjct: 158 QTPPPVPPPDHRSLDNNFNIATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of MELO3C005013 vs. ExPASy TrEMBL
Match: A0A1S3CK12 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.2e-58
Identity = 116/180 (64.44%), Postives = 138/180 (76.67%), Query Frame = 0


Query: 9   TASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQN 68
           T  A VV+    PCAACKILRRRC E C L PYFPP +PLKFTIAHR+FGASNIIKLL +
Sbjct: 28  TVQAPVVV---SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLD 87

Query: 69  LPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQ 128
           LP SQRADAV+S+VYEASARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ +HC Q
Sbjct: 88  LPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQ 147

Query: 129 ANLMTLICKELGQMPEP-------PMH----DHYNIASPQGYYSYSYLFEESNVLEPLWT 178
            NL+ LICKEL Q P P       P H    +++NIA+PQ Y  Y+ LFE+SN+ +PLWT
Sbjct: 148 TNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]

BLAST of MELO3C005013 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-47
Identity = 98/195 (50.26%), Postives = 127/195 (65.13%), Query Frame = 0


Query: 1   MKKSEEANTASAVVVMGST------------QPCAACKILRRRCRENCELGPYFPPMEPL 60
           M+   +A+ A+  ++  S+             PCAACKILRRRC E C L PYFPP +P 
Sbjct: 1   MESKSDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 60

Query: 61  KFTIAHRVFGASNIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQIN 120
           KFTIAHRVFGASNIIK LQ LP+SQR DAVNSMVYEA ARIRDP+YGCAG+I+HLQRQ++
Sbjct: 61  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 120

Query: 121 DLQIELAKAQAEVLRMHCQQANLMTLICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEE 178
           +LQ +LAKAQ E++ M  Q++NL+ LI      M +    +  N++         +L ++
Sbjct: 121 ELQAQLAKAQVEMVNMQFQRSNLLELIY----NMDQQQKQEQDNMSFESN--DLGFLEDK 180

[Close]

BLAST of MELO3C005013 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 178.7 bits (452), Expect = 4.1e-45
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC + C L PYFPP +P KFTIAHRVFGASNIIK LQ LP+SQR DAVNS
Sbjct: 55  PCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNS 114

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 136
           MVYEA AR+RDP+YGCAG+I+HLQRQ+++LQ +LAK Q E++ M  Q+++L+ LI
Sbjct: 115 MVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]

BLAST of MELO3C005013 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 155.2 bits (391), Expect = 4.8e-38
Identity = 76/163 (46.63%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 17  GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRAD 76
           G+  PCAACK+LRRRC ++C   PYFP  EP KF   HRVFGASN+ K+LQ LP  QR D
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 77  AVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMT--L 136
           AV+SMVYEA+AR+RDP+YGC G+I  LQ+QI+ LQ +LA AQAEV+ +  +Q+       
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 137 ICKELGQMPEPPMHDHYNIASPQGYYSYSYLFEESNVLEPLWT 178
           +C +       P     +    +G +S+  + +E+++ E +W+
Sbjct: 129 LCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of MELO3C005013 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 19  TQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAV 78
           + PCA+CK+LRRRC ++C   PYFPP +P KF I H+VFGASN+ K+LQ LP  QRADAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 79  NSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQ 128
           NS+V+EA+AR+RDP+YGC G+I +LQ Q++ LQ++LA AQAE+L +  Q
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of MELO3C005013 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 141.0 bits (354), Expect = 9.4e-34
Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 16  MGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRA 75
           + +  PCAACK+LRRRC + C   PYF P EP KF   H+VFGASN+ K+L  +P+SQRA
Sbjct: 40  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRA 99

Query: 76  DAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 135
           DA NS+VYEA+ R+RDP+YGC G+I  LQ+Q+  LQ EL   ++E+L+ + Q+  + TLI
Sbjct: 100 DAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILK-YKQREAVATLI 159

Query: 136 CKELGQM 143
                Q+
Sbjct: 160 VPSNSQV 165

The following BLAST results are available for this feature:

BLAST of MELO3C005013 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	2.7e-46	50.26	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	5.7e-44	70.43	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9SHE9	6.8e-37	46.63	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	1.7e-35	60.55	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	1.3e-32	51.18	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of MELO3C005013 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463578.1	4.3e-97	100.00	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0051930.1 LOB...	[more]
XP_004147298.1	1.6e-83	85.79	LOB domain-containing protein 1 [Cucumis sativus] >KGN64754.1 hypothetical prote...	[more]
XP_038893916.1	3.2e-76	80.87	LOB domain-containing protein 1 [Benincasa hispida]	[more]
XP_038895012.1	4.2e-60	69.70	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022157927.1	1.8e-58	69.51	LOB domain-containing protein 11-like [Momordica charantia]	[more]

BLAST of MELO3C005013 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLP6	2.1e-97	100.00	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CK31	2.1e-97	100.00	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=...	[more]
A0A0A0LUS4	7.7e-84	85.79	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=3 SV...	[more]
A0A6J1DVT7	8.5e-59	69.51	LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A1S3CK12	7.2e-58	64.44	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=...	[more]

BLAST of MELO3C005013 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	2.0e-47	50.26	LOB domain-containing protein 1	[more]
AT2G28500.1	4.1e-45	70.43	LOB domain-containing protein 11	[more]
AT1G31320.1	4.8e-38	46.63	LOB domain-containing protein 4	[more]
AT2G30130.1	1.2e-36	60.55	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	9.4e-34	51.18	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..127
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..176
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 12..176
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 21..118 e-value: 2.0E-38 score: 131.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 20..121 score: 25.179941

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005013.1	MELO3C005013.1	mRNA