MELO3C005009 (gene) Melon (DHL92) v4

Overview


Name	MELO3C005009
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	LOB domain-containing protein
Location	chr12: 4617591 .. 4619051 (+)
RNA-Seq Expression	MELO3C005009
Synteny	MELO3C005009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAACTTATGACGTCATCTCTTCTTCTTCATTTCGTCTCTATATATATTATATTCTTCATTCTTCTTCACAGCCAAAACCAACTTCATTTCTCTCTTTCTACCCAGTCTAAAATGGAGTCTAGGGAGGTAAAATCCAGCCCGACTTCAACACTCCTTTCTCAGTCCCCGTCGCCGTCTCCTTCACCGCCCCCGACTGTTCAGGCCCCCGTGGTGGTCAGTCCATGTGCGGCGTGCAAGATTCTGCGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTCAAGTTCACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCTGGTACTTCCTTAATCCCAATTTTCTGTTTCTCTTTCAAATTTCGCGTGTTATCTTCTTGTTTCTAGGTTTAGAGATTATGGATTCCGTTCTGGAAATTGAAATTTGACCTTAAAAACTTAACGAAAAACCATCGCATTAGTTTGGGAATTCTGTTTGAGCAATTAAAGTCATCTCTGGCTGGAATGAAGTTAGTACTGAAATTGATCAAACGAAATCCTAATAATCTATGAAGAATTCACAATCCTATTCTGTTTAATTGCTTTTTCTTGATGAAAATTTGAAGCTATAATATTCAAGCATCATGTAAATTAGTAGAATCAAATGAAAGCACCCCAACTGTTTGATTAATGTCCTCACAGAACAACCCATCATATTAATCGCTTTATTGAATTCTTCAGGATCTTCCAGATTCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCACCACCGATGTCATCATTGTCGCTCCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGAAAAAGAAAAAGAGAAACTTGAGATTTCTAAGACAAAGGTTTTGGGAAGTCAAAGTTGGATTGGTTTTTAGTAGAACATATGAAAGTTAAGTAGTTGAATATCGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTTAAAACCAAGAAAAGTGGAGTGAAGAAAAAGGACTGATGGTTACTAGAGACTAGATTAGTGCGAAATATATTATATCTTAGTATATATCTTCTTCTTCTTTTTTCTTTTTTTGGTTACCTACCATTAACTTCTTAACATTGATGTGTGAAGAAAAGGAACATATTTGTCAAAACATTTTGA

mRNA sequence

ATTTCAACTTATGACGTCATCTCTTCTTCTTCATTTCGTCTCTATATATATTATATTCTTCATTCTTCTTCACAGCCAAAACCAACTTCATTTCTCTCTTTCTACCCAGTCTAAAATGGAGTCTAGGGAGGTAAAATCCAGCCCGACTTCAACACTCCTTTCTCAGTCCCCGTCGCCGTCTCCTTCACCGCCCCCGACTGTTCAGGCCCCCGTGGTGGTCAGTCCATGTGCGGCGTGCAAGATTCTGCGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTCAAGTTCACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCTGGATCTTCCAGATTCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCACCACCGATGTCATCATTGTCGCTCCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGAAAAAGAAAAAGAGAAACTTGAGATTTCTAAGACAAAGGTTTTGGGAAGTCAAAGTTGGATTGGTTTTTAGTAGAACATATGAAAGTTAAGTAGTTGAATATCGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTTAAAACCAAGAAAAGTGGAGTGAAGAAAAAGGACTGATGGTTACTAGAGACTAGATTAGTGCGAAATATATTATATCTTAGTATATATCTTCTTCTTCTTTTTTCTTTTTTTGGTTACCTACCATTAACTTCTTAACATTGATGTGTGAAGAAAAGGAACATATTTGTCAAAACATTTTGA

Coding sequence (CDS)

ATGACGTCATCTCTTCTTCTTCATTTCGTCTCTATATATATTATATTCTTCATTCTTCTTCACAGCCAAAACCAACTTCATTTCTCTCTTTCTACCCAGTCTAAAATGGAGTCTAGGGAGGTAAAATCCAGCCCGACTTCAACACTCCTTTCTCAGTCCCCGTCGCCGTCTCCTTCACCGCCCCCGACTGTTCAGGCCCCCGTGGTGGTCAGTCCATGTGCGGCGTGCAAGATTCTGCGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTCAAGTTCACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCTGGATCTTCCAGATTCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCACCACCGATGTCATCATTGTCGCTCCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGA

Protein sequence

MTSSLLLHFVSIYIIFFILLHSQNQLHFSLSTQSKMESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT

Homology

[Close]

BLAST of MELO3C005009 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 1.7e-51
Identity = 116/209 (55.50%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 44  SPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTI 103
           SPTS     SP P PSP    Q PVV+SPCAACKILRRRCA+KCVLAPYFPP+DP KFTI
Sbjct: 32  SPTS-----SPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTI 91

Query: 104 AHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQA 163
           AHR+FGASNIIK L +LP+SQR DAV+S+VYEA AR+RDPVYGCAGAI  LQ+Q++ELQA
Sbjct: 92  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQA 151

Query: 164 ELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFN-----IATP 223
           +LAKTQ ELV +   +++L+ LI   + QT   +S         S +++F      I++P
Sbjct: 152 QLAKTQVELVGMQLQRSSLLELI-YNMEQT--KLSVQEQGQQKMSFESSFESGDEFISSP 211

Query: 224 QSYQGYTSLFEDSN--------IWDPLWT 240
                     ED+N         WDPLWT
Sbjct: 212 DEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

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BLAST of MELO3C005009 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.0e-51
Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 0


Query: 36  MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           MES+   S  T+ ++S     S SPPP++   VV+SPCAACKILRRRCAE+CVLAPYFPP
Sbjct: 1   MESKSDASVATTPIISS----SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           +DP KFTIAHR+FGASNIIK L +LP+SQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ
Sbjct: 61  TDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQ 120

Query: 156 KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           +Q++ELQA+LAK Q E+VN+   ++NL+ LI     Q      ++S         N+   
Sbjct: 121 RQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSF------ESNDLGF 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
              +S    + L+     WDPLWT
Sbjct: 181 LEDKSNTNSSMLW-----WDPLWT 189

[Close]

BLAST of MELO3C005009 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 7.7e-36
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCA+CK+LRRRCA+ C+ APYFPP DP KF I H++FGASN+ K+L +LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKEL 190
           SLV+EA+AR+RDPVYGC GAI  LQ Q+++LQ +LA  QAE             ++C ++
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAE-------------ILCIQM 126

Query: 191 AQTPPPMSS---LSLLPDHRSL---DNNFN 215
              P   S    L L  DH++L   +NN N
Sbjct: 127 QNEPTLQSHHQVLELDQDHKALLLNNNNIN 143

[Close]

BLAST of MELO3C005009 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35
Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCAACK+LRRRCA+ CV +PYFP  +P KF   HR+FGASN+ K+L +LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQ-TNLVAL-ICK 190
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 191 ELAQTPPPMSSLSLLP-DHRSLDNNFNIATPQS 221
           +   +    SS  + P D++ + ++ +I    S
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEAS 164

[Close]

BLAST of MELO3C005009 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 8.0e-33
Identity = 65/118 (55.08%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 56  PSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIK 115
           P   PP T+     ++PCAACK+LRRRCA++C  +PYF P +P KF   H++FGASN+ K
Sbjct: 32  PMSGPPGTLN---TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSK 91

Query: 116 LLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELV 174
           +L+++P+SQRADA +SLVYEA+ R+RDPVYGC GAI  LQ+Q+  LQAEL   ++E++
Sbjct: 92  MLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL 146

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BLAST of MELO3C005009 vs. NCBI nr
Match: XP_008463550.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 3.0e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 36  MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP
Sbjct: 1   MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ
Sbjct: 61  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 120

Query: 156 KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI
Sbjct: 121 KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
           ATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 181 ATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]

BLAST of MELO3C005009 vs. NCBI nr
Match: XP_004147299.1 (LOB domain-containing protein 1 [Cucumis sativus] >KAE8652739.1 hypothetical protein Csa_013406 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 2.8e-99
Identity = 192/208 (92.31%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 36  MESREVKSSPTSTLL---SQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPY 95
           MES + KSSPTSTLL   S SPSPSPSPPPTVQA VVV+PCAACKILRRRC +KCVLAPY
Sbjct: 1   MESTDTKSSPTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPY 60

Query: 96  FPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAIC 155
           FPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAIC
Sbjct: 61  FPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAIC 120

Query: 156 QLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNN 215
           QLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSS SLLP+HRSLDN+
Sbjct: 121 QLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNS 180

Query: 216 FNI-ATPQSYQGYTSLFEDSNIWDPLWT 240
           FNI ATPQSYQGYTSLF DSNIWDPLWT
Sbjct: 181 FNIVATPQSYQGYTSLFGDSNIWDPLWT 208

[Close]

BLAST of MELO3C005009 vs. NCBI nr
Match: KAA0051926.1 (LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK12236.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.7e-94
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 65  QAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ 124
           +APVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ
Sbjct: 5   EAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ 64

Query: 125 RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVA 184
           RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVA
Sbjct: 65  RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVA 124

Query: 185 LICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
           LICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 125 LICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 179

[Close]

BLAST of MELO3C005009 vs. NCBI nr
Match: XP_038895012.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 6.6e-93
Identity = 180/205 (87.80%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 36  MESREVKSSPTSTL-LSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFP 95
           ME  E KS   ST+ LSQSPS SPSPPP++Q  VVVSPCAACKILRRRCAEKCVLAPYFP
Sbjct: 1   MECCEAKSGQASTIFLSQSPSSSPSPPPSIQTGVVVSPCAACKILRRRCAEKCVLAPYFP 60

Query: 96  PSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQL 155
           PSDPLKFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEA+ARIRDPVYGCAGAICQL
Sbjct: 61  PSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEANARIRDPVYGCAGAICQL 120

Query: 156 QKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFN 215
           QKQINELQAELAKTQAELVNIHC Q NLVALICKEL Q PPPMS    LPDHRSLDNNFN
Sbjct: 121 QKQINELQAELAKTQAELVNIHCRQANLVALICKELTQLPPPMSP---LPDHRSLDNNFN 180

Query: 216 IATPQSYQGYTSLFEDSNIWDPLWT 240
           IATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 181 IATPQSYQGYTSLFEDSNIWDPLWT 202

[Close]

BLAST of MELO3C005009 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-90
Identity = 174/205 (84.88%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 36  MESREVKSSPTSTLL-SQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFP 95
           ME  E KS+ TST+L SQSPSPSP PPP++ A VVVSPCAACKILRRRCAEKCVLAPYFP
Sbjct: 1   MECSEAKSNTTSTILRSQSPSPSPPPPPSIPAGVVVSPCAACKILRRRCAEKCVLAPYFP 60

Query: 96  PSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQL 155
           PSDP KFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGAICQL
Sbjct: 61  PSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQL 120

Query: 156 QKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFN 215
           QKQINELQAELAKTQAELVN+HCHQ +LVALICKELAQTPPP+      PDHRSLDNNFN
Sbjct: 121 QKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPP----PDHRSLDNNFN 180

Query: 216 IATPQSYQGYTSLFEDSNIWDPLWT 240
           IATPQSYQ YT   EDSNIW+PLWT
Sbjct: 181 IATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of MELO3C005009 vs. ExPASy TrEMBL
Match: A0A1S3CK12 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 36  MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP
Sbjct: 1   MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ
Sbjct: 61  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 120

Query: 156 KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI
Sbjct: 121 KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
           ATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 181 ATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]

BLAST of MELO3C005009 vs. ExPASy TrEMBL
Match: A0A5D3CPB0 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00420 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 65  QAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ 124
           +APVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ
Sbjct: 5   EAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ 64

Query: 125 RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVA 184
           RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVA
Sbjct: 65  RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVA 124

Query: 185 LICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
           LICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 125 LICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 179

[Close]

BLAST of MELO3C005009 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.7e-91
Identity = 174/205 (84.88%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 36  MESREVKSSPTSTLL-SQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFP 95
           ME  E KS+ TST+L SQSPSPSP PPP++ A VVVSPCAACKILRRRCAEKCVLAPYFP
Sbjct: 1   MECSEAKSNTTSTILRSQSPSPSPPPPPSIPAGVVVSPCAACKILRRRCAEKCVLAPYFP 60

Query: 96  PSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQL 155
           PSDP KFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGAICQL
Sbjct: 61  PSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQL 120

Query: 156 QKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFN 215
           QKQINELQAELAKTQAELVN+HCHQ +LVALICKELAQTPPP+      PDHRSLDNNFN
Sbjct: 121 QKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPP----PDHRSLDNNFN 180

Query: 216 IATPQSYQGYTSLFEDSNIWDPLWT 240
           IATPQSYQ YT   EDSNIW+PLWT
Sbjct: 181 IATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of MELO3C005009 vs. ExPASy TrEMBL
Match: A0A6J1I3T6 (LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469412 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.3e-82
Identity = 167/202 (82.67%), Postives = 177/202 (87.62%), Query Frame = 0


Query: 40  EVKSSPTSTLL-SQSPSPSP-SPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSD 99
           + KSSPTST+  SQSPS SP  PPP+VQA +VVSPCAACK LRRRC EKCVLAPYFPPSD
Sbjct: 2   DAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSD 61

Query: 100 PLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 159
           PLKFTIAHRIFGASNIIKLL DLP+SQR DAVSSLVYEASARIRDPVYGCAGAI QLQKQ
Sbjct: 62  PLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQ 121

Query: 160 INELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNIAT 219
           INELQAELAKTQAELVNIH HQTNLVALICKELAQTPPP+S     PDH +LDNN N A 
Sbjct: 122 INELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP----PDHHALDNNLNTAI 181

Query: 220 PQSYQGYTSLFEDSNIWDPLWT 240
           PQS   YT+LFEDS+IW+PLWT
Sbjct: 182 PQS---YTNLFEDSSIWEPLWT 196

[Close]

BLAST of MELO3C005009 vs. ExPASy TrEMBL
Match: A0A6J1HPR9 (LOB domain-containing protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464931 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 166/202 (82.18%), Postives = 177/202 (87.62%), Query Frame = 0


Query: 40  EVKSSPTSTLL-SQSPSPSPSPPP-TVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSD 99
           + KSSPTST+  SQSPS SP PPP +VQA +V SPCAACK LRRRC EKCVLAPYFPPSD
Sbjct: 2   DAKSSPTSTIFRSQSPSSSPLPPPQSVQAGLVASPCAACKTLRRRCTEKCVLAPYFPPSD 61

Query: 100 PLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 159
           PLKFTIAHRIFGASNIIKLL DLP+SQR DAVSSLVYEASARIRDPVYGCAGAI QLQKQ
Sbjct: 62  PLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQ 121

Query: 160 INELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNIAT 219
           INELQAELAKTQAEL+NIH HQTNLVALICKELAQTPPP+S L    DH +LDNN N AT
Sbjct: 122 INELQAELAKTQAELLNIHSHQTNLVALICKELAQTPPPVSPL----DHHTLDNNLNTAT 181

Query: 220 PQSYQGYTSLFEDSNIWDPLWT 240
           PQS   YT+LFEDS+IW+PLWT
Sbjct: 182 PQS---YTNLFEDSSIWEPLWT 196

[Close]

BLAST of MELO3C005009 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52
Identity = 116/209 (55.50%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 44  SPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTI 103
           SPTS     SP P PSP    Q PVV+SPCAACKILRRRCA+KCVLAPYFPP+DP KFTI
Sbjct: 32  SPTS-----SPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTI 91

Query: 104 AHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQA 163
           AHR+FGASNIIK L +LP+SQR DAV+S+VYEA AR+RDPVYGCAGAI  LQ+Q++ELQA
Sbjct: 92  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQA 151

Query: 164 ELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFN-----IATP 223
           +LAKTQ ELV +   +++L+ LI   + QT   +S         S +++F      I++P
Sbjct: 152 QLAKTQVELVGMQLQRSSLLELI-YNMEQT--KLSVQEQGQQKMSFESSFESGDEFISSP 211

Query: 224 QSYQGYTSLFEDSN--------IWDPLWT 240
                     ED+N         WDPLWT
Sbjct: 212 DEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of MELO3C005009 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 202.6 bits (514), Expect = 3.6e-52
Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 0


Query: 36  MESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           MES+   S  T+ ++S     S SPPP++   VV+SPCAACKILRRRCAE+CVLAPYFPP
Sbjct: 1   MESKSDASVATTPIISS----SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           +DP KFTIAHR+FGASNIIK L +LP+SQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ
Sbjct: 61  TDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQ 120

Query: 156 KQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           +Q++ELQA+LAK Q E+VN+   ++NL+ LI     Q      ++S         N+   
Sbjct: 121 RQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSF------ESNDLGF 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
              +S    + L+     WDPLWT
Sbjct: 181 LEDKSNTNSSMLW-----WDPLWT 189

[Close]

BLAST of MELO3C005009 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-37
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCA+CK+LRRRCA+ C+ APYFPP DP KF I H++FGASN+ K+L +LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKEL 190
           SLV+EA+AR+RDPVYGC GAI  LQ Q+++LQ +LA  QAE             ++C ++
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAE-------------ILCIQM 126

Query: 191 AQTPPPMSS---LSLLPDHRSL---DNNFN 215
              P   S    L L  DH++L   +NN N
Sbjct: 127 QNEPTLQSHHQVLELDQDHKALLLNNNNIN 143

[Close]

BLAST of MELO3C005009 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-36
Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCAACK+LRRRCA+ CV +PYFP  +P KF   HR+FGASN+ K+L +LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQ-TNLVAL-ICK 190
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 191 ELAQTPPPMSSLSLLP-DHRSLDNNFNIATPQS 221
           +   +    SS  + P D++ + ++ +I    S
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEAS 164

[Close]

BLAST of MELO3C005009 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 142.1 bits (357), Expect = 5.7e-34
Identity = 65/118 (55.08%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 56  PSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIK 115
           P   PP T+     ++PCAACK+LRRRCA++C  +PYF P +P KF   H++FGASN+ K
Sbjct: 32  PMSGPPGTLN---TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSK 91

Query: 116 LLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELV 174
           +L+++P+SQRADA +SLVYEA+ R+RDPVYGC GAI  LQ+Q+  LQAEL   ++E++
Sbjct: 92  MLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL 146

The following BLAST results are available for this feature:

BLAST of MELO3C005009 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK08	1.7e-51	55.50	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9LQR0	5.0e-51	54.41	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q8LBW3	7.7e-36	52.00	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	2.3e-35	51.63	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	8.0e-33	55.08	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of MELO3C005009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463550.1	3.0e-109	100.00	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]	[more]
XP_004147299.1	2.8e-99	92.31	LOB domain-containing protein 1 [Cucumis sativus] >KAE8652739.1 hypothetical pro...	[more]
KAA0051926.1	2.7e-94	99.43	LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK12236.1 LOB ...	[more]
XP_038895012.1	6.6e-93	87.80	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022157927.1	1.8e-90	84.88	LOB domain-containing protein 11-like [Momordica charantia]	[more]

BLAST of MELO3C005009 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK12	1.4e-109	100.00	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=...	[more]
A0A5D3CPB0	1.3e-94	99.43	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1DVT7	8.7e-91	84.88	LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A6J1I3T6	3.3e-82	82.67	LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HPR9	1.3e-81	82.18	LOB domain-containing protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C005009 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28500.1	1.2e-52	55.50	LOB domain-containing protein 11	[more]
AT1G07900.1	3.6e-52	54.41	LOB domain-containing protein 1	[more]
AT2G30130.1	5.5e-37	52.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.6e-36	51.63	LOB domain-containing protein 4	[more]
AT2G40470.1	5.7e-34	55.08	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..65
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 60..238
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 60..238
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 72..169 e-value: 6.0E-40 score: 135.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 71..172 score: 26.426443

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005009.1	MELO3C005009.1	mRNA