MELO3C004953.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C004953.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionSubtilisin-like protease SBT4.14
Locationchr12: 5992761 .. 5993072 (+)
RNA-Seq ExpressionMELO3C004953.jh1
SyntenyMELO3C004953.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATGGGGTTATTCCCGACTCATTACTGACGTCAGGAATGACGATGTCGGGGATTCATTATTTCCGACGCATCAACAACGTCGAAAAAGATGATGTCGGGAGAAGGGTATTCCTGACACCTTGTTTGGTGACACGTCCGAAAAAGGTCTCCCGACACGTTTCTTCCGACGGTCTTCCTGACGCACCATTATGCATTGGGAATTGTTTTCCTGACGTATCTTCCACTATTCCTGATGTTTTTGTGCATCGGGAAATAGCCCCATTTCATGTAGTGATGCTATCACTGATAGACACCTTTCGATCATAA

mRNA sequence

ATGGGAAATGGGGTTATTCCCGACTCATTACTGACGTCAGGAATGACGATGTCGGGGATTCATTATTTCCGACGCATCAACAACGTCGAAAAAGATGATGTCGGGAGAAGGGTATTCCTGACACCTTGTTTGGTGACACGTCCGAAAAAGGTCTCCCGACACGTTTCTTCCGACGGTCTTCCTGACGCACCATTATGCATTGGGAATTGTTTTCCTGACGTATCTTCCACTATTCCTGATGTTTTTGTGCATCGGGAAATAGCCCCATTTCATGTAGTGATGCTATCACTGATAGACACCTTTCGATCATAA

Coding sequence (CDS)

ATGGGAAATGGGGTTATTCCCGACTCATTACTGACGTCAGGAATGACGATGTCGGGGATTCATTATTTCCGACGCATCAACAACGTCGAAAAAGATGATGTCGGGAGAAGGGTATTCCTGACACCTTGTTTGGTGACACGTCCGAAAAAGGTCTCCCGACACGTTTCTTCCGACGGTCTTCCTGACGCACCATTATGCATTGGGAATTGTTTTCCTGACGTATCTTCCACTATTCCTGATGTTTTTGTGCATCGGGAAATAGCCCCATTTCATGTAGTGATGCTATCACTGATAGACACCTTTCGATCATAA

Protein sequence

MGNGVIPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS
Homology
BLAST of MELO3C004953.jh1 vs. NCBI nr
Match: KAA0051817.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK21427.1 subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (540), Expect = 2.35e-69
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0

Query: 1   MGNGVIPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60
           MGNGVIPDSLLTSGM MSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL
Sbjct: 1   MGNGVIPDSLLTSGMMMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60

Query: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103
           PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS
Sbjct: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103

BLAST of MELO3C004953.jh1 vs. NCBI nr
Match: TYK28456.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.17e-09
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 28 NVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHRE 86
          +++ D+VGR V   P LVT  + +S  VSSD LPD   CI N  PDV +T  DVF+ RE
Sbjct: 12 DIDNDNVGRSVLSMPLLVTHQESLSLRVSSDDLPDVAFCIENSVPDVINTYVDVFMRRE 70

BLAST of MELO3C004953.jh1 vs. NCBI nr
Match: KAA0058107.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 2.34e-09
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0

Query: 6   IPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPL 65
           +P   LT  + MS +   R   +++ D+VGR VF  P LVT  + +S  VSSD LPD   
Sbjct: 46  VPWPHLTLELWMSEMPCRRCTVDIDNDNVGRSVFSMPLLVTHQESLSLRVSSDDLPDVAF 105

Query: 66  CIGNCFPDVSSTIPDVFV 83
           CI N  PDV +T  DVF+
Sbjct: 106 CIENSVPDVINTYVDVFM 123

BLAST of MELO3C004953.jh1 vs. NCBI nr
Match: KAA0056492.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK29031.1 subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 51.2 bits (121), Expect = 3.92e-06
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0

Query: 32 DDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHRE 86
          +D+G  V     LVTR +  SRH+SSDGL D   CI N   DV  T  +VFV RE
Sbjct: 2  EDIGNTVVPNAVLVTRQESASRHISSDGLLDVYSCIKNLILDVIYTSVNVFVRRE 56

BLAST of MELO3C004953.jh1 vs. NCBI nr
Match: KAA0067475.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 52.0 bits (123), Expect = 1.53e-05
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0

Query: 34  VGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPD 73
           + R   L   LVTR +KVSR +S DGLPD P C+GN FPD
Sbjct: 114 ISREGVLDALLVTRREKVSRRISLDGLPDVPFCVGNWFPD 153

BLAST of MELO3C004953.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DCP6 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00870 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 1.14e-69
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0

Query: 1   MGNGVIPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60
           MGNGVIPDSLLTSGM MSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL
Sbjct: 1   MGNGVIPDSLLTSGMMMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60

Query: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103
           PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS
Sbjct: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103

BLAST of MELO3C004953.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DXG9 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00880 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.66e-10
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 28 NVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHRE 86
          +++ D+VGR V   P LVT  + +S  VSSD LPD   CI N  PDV +T  DVF+ RE
Sbjct: 12 DIDNDNVGRSVLSMPLLVTHQESLSLRVSSDDLPDVAFCIENSVPDVINTYVDVFMRRE 70

BLAST of MELO3C004953.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UTP8 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004150 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.13e-09
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0

Query: 6   IPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPL 65
           +P   LT  + MS +   R   +++ D+VGR VF  P LVT  + +S  VSSD LPD   
Sbjct: 46  VPWPHLTLELWMSEMPCRRCTVDIDNDNVGRSVFSMPLLVTHQESLSLRVSSDDLPDVAF 105

Query: 66  CIGNCFPDVSSTIPDVFV 83
           CI N  PDV +T  DVF+
Sbjct: 106 CIENSVPDVINTYVDVFM 123

BLAST of MELO3C004953.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UKZ7 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001470 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.90e-06
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0

Query: 32 DDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHRE 86
          +D+G  V     LVTR +  SRH+SSDGL D   CI N   DV  T  +VFV RE
Sbjct: 2  EDIGNTVVPNAVLVTRQESASRHISSDGLLDVYSCIKNLILDVIYTSVNVFVRRE 56

BLAST of MELO3C004953.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VP88 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001570 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.41e-06
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0

Query: 34  VGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPD 73
           + R   L   LVTR +KVSR +S DGLPD P C+GN FPD
Sbjct: 114 ISREGVLDALLVTRREKVSRRISLDGLPDVPFCVGNWFPD 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0051817.12.35e-6999.03subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK21427.1 subtilis... [more]
TYK28456.11.17e-0949.15subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa][more]
KAA0058107.12.34e-0943.59subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa][more]
KAA0056492.13.92e-0649.09subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK29031.1 subtilis... [more]
KAA0067475.11.53e-0557.50CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DCP61.14e-6999.03Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3DXG95.66e-1049.15Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7UTP81.13e-0943.59Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5A7UKZ71.90e-0649.09Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7VP887.41e-0657.50CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004953.jh1.t1MELO3C004953.jh1.t1mRNA