MELO3C004748.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AACACTGAATAATTTTCACTCATAGTAATTTTTTATTCAAATATACGACATTTTAAAGTTACATAATAGGAGCTTACATGATTGATTAGAAAGAACTTGAAGCAAATAAAATTCCACCAGGAAACCTCATGCTTGAAAATTCGAGTCTAGAGAAGCTACACTTCTTTGATAATGCACACAAGTATGTTGTCAAAGGTGGAATACTGAGGGGGAGACAAGTTGGATTCGAGGAAATATAAAGAGTGAATGGATAACAGTATTTGGTGCATACTAGGGAGTGGAAGGAATGCTCGGGATAACTGGAATATTAGGAAGGGGAGGAAAATCGGTGGATAGAATAGAAGGAACGTTGGGGATAGTAACAGGTGGAATATTAGAGACAAGTGGAATCGAAGGCAATGAAGGAACGTCCGGGAAAGTAACGGGTGGAATATTAGAGACAAGTGGAATTGAAGGCAATAAAGGAATGTCTGGGATAGGAACGTCCGGGAAAGTAACAGGTGGAATATTAGGGATGAGTGGAATCGAAGGTAATGAAGGAACGTTCGGGATAGTAACGGATGGAATATTAGGGACGAGTGGAATCGAAAGCAAAGAAGGAACGTTCGGGATAGGAATGTTTGGAATAGTAACAGGTGGAGTATTAGGCACGAATGGAATCGAAGGCAATAAAGGAACGTTTGGGATAGTAACCGGTGGAATGTTAGGGAGGAGAGGTGAACTGATTGATGGAACAGAAGGCAATGATTGTTGGAGATGACGTCCTGCTTCACTCCCTTTGATGGTTGTTGATGATAGAGTTATAAATACAAGAACAAGGATTAAGAAGCTTTTATCGGAAGCCATGATAGATAAATGTTTACTTCAACTTACAATGATATCGTAAACATACGTTTGGGGGTTTTTATATCCAAGGTTATGCATCCATTGGTAGCTAGGCTTAATTGGCGGTCCACTATTTGCTAGCATTATTGATTATTATCATTATTATGATTACATTTTTTTTTTAATTTAAGAAATATTGTTTGAAACTTTTACAATTTCTTTTTTGTTGGTACATTTTTTTATAATTTAAGAAAACATTGTTTTGTACTTTAGCTATCTATTATTTTATATTTTAGTGAAATTTCAAATGTCAT AACACTGAATAATTTTCACTCATAGTAATTTTTTATTCAAATATACGACATTTTAAAGTTACATAATAGGAGCTTACATGATTGATTAGAAAGAACTTGAAGCAAATAAAATTCCACCAGGAAACCTCATGCTTGAAAATTCGAGTCTAGAGAAGCTACACTTCTTTGATAATGCACACAAGTATGTTGTCAAAGGTGGAATACTGAGGGGGAGACAAGTTGGATTCGAGGAAATATAAAGAGTGAATGGATAACAGTATTTGGTGCATACTAGGGAGTGGAAGGAATGCTCGGGATAACTGGAATATTAGGAAGGGGAGGAAAATCGGTGGATAGAATAGAAGGAACGTTGGGGATAGTAACAGGTGGAATATTAGAGACAAGTGGAATCGAAGGCAATGAAGGAACGTCCGGGAAAGTAACGGGTGGAATATTAGAGACAAGTGGAATTGAAGGCAATAAAGGAATGTCTGGGATAGGAACGTCCGGGAAAGTAACAGGTGGAATATTAGGGATGAGTGGAATCGAAGGTAATGAAGGAACGTTCGGGATAGTAACGGATGGAATATTAGGGACGAGTGGAATCGAAAGCAAAGAAGGAACGTTCGGGATAGGAATGTTTGGAATAGTAACAGGTGGAGTATTAGGCACGAATGGAATCGAAGGCAATAAAGGAACGTTTGGGATAGTAACCGGTGGAATGTTAGGGAGGAGAGGTGAACTGATTGATGGAACAGAAGGCAATGATTGTTGGAGATGACGTCCTGCTTCACTCCCTTTGATGGTTGTTGATGATAGAGTTATAAATACAAGAACAAGGATTAAGAAGCTTTTATCGGAAGCCATGATAGATAAATGTTTACTTCAACTTACAATGATATCGTAAACATACGTTTGGGGGTTTTTATATCCAAGGTTATGCATCCATTGGTAGCTAGGCTTAATTGGCGGTCCACTATTTGCTAGCATTATTGATTATTATCATTATTATGATTACATTTTTTTTTTAATTTAAGAAATATTGTTTGAAACTTTTACAATTTCTTTTTTGTTGGTACATTTTTTTATAATTTAAGAAAACATTGTTTTGTACTTTAGCTATCTATTATTTTATATTTTAGTGAAATTTCAAATGTCAT ATGCTCGGGATAACTGGAATATTAGGAAGGGGAGGAAAATCGGTGGATAGAATAGAAGGAACGTTGGGGATAGTAACAGGTGGAATATTAGAGACAAGTGGAATCGAAGGCAATGAAGGAACGTCCGGGAAAGTAACGGGTGGAATATTAGAGACAAGTGGAATTGAAGGCAATAAAGGAATGTCTGGGATAGGAACGTCCGGGAAAGTAACAGGTGGAATATTAGGGATGAGTGGAATCGAAGGTAATGAAGGAACGTTCGGGATAGTAACGGATGGAATATTAGGGACGAGTGGAATCGAAAGCAAAGAAGGAACGTTCGGGATAGGAATGTTTGGAATAGTAACAGGTGGAGTATTAGGCACGAATGGAATCGAAGGCAATAAAGGAACGTTTGGGATAGTAACCGGTGGAATGTTAGGGAGGAGAGGTGAACTGATTGATGGAACAGAAGGCAATGATTGTTGGAGATGA MLGITGILGRGGKSVDRIEGTLGIVTGGILETSGIEGNEGTSGKVTGGILETSGIEGNKGMSGIGTSGKVTGGILGMSGIEGNEGTFGIVTDGILGTSGIESKEGTFGIGMFGIVTGGVLGTNGIEGNKGTFGIVTGGMLGRRGELIDGTEGNDCWR Homology
BLAST of MELO3C004748.jh1 vs. NCBI nr
Match: XP_031739036.1 (collagen alpha-1(IV) chain [Cucumis sativus]) HSP 1 Score: 97.4 bits (241), Expect = 7.31e-21 Identity = 88/158 (55.70%), Postives = 98/158 (62.03%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. NCBI nr
Match: CAB4159571.1 (Collagen triple helix repeat, partial [uncultured Caudovirales phage]) HSP 1 Score: 68.9 bits (167), Expect = 3.70e-10 Identity = 69/152 (45.39%), Postives = 81/152 (53.29%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. NCBI nr
Match: NBR25198.1 (calcium-binding protein [Micrococcales bacterium]) HSP 1 Score: 67.8 bits (164), Expect = 8.62e-10 Identity = 73/164 (44.51%), Postives = 89/164 (54.27%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. NCBI nr
Match: TMW66081.1 (hypothetical protein Poli38472_003846 [Pythium oligandrum]) HSP 1 Score: 65.9 bits (159), Expect = 3.69e-09 Identity = 60/153 (39.22%), Postives = 85/153 (55.56%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. NCBI nr
Match: CAB4124396.1 (Collagen triple helix repeat, partial [uncultured Caudovirales phage]) HSP 1 Score: 65.1 bits (157), Expect = 8.13e-09 Identity = 54/141 (38.30%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LY65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153560 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.26e-21 Identity = 86/158 (54.43%), Postives = 99/158 (62.66%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. ExPASy TrEMBL
Match: A0A0F8AK28 (Spectrin beta chain, brain 1 OS=Larimichthys crocea OX=215358 GN=EH28_08933 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.37e-10 Identity = 71/144 (49.31%), Postives = 87/144 (60.42%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. ExPASy TrEMBL
Match: A0A6J5NQC0 (Collagen triple helix repeat (Fragment) OS=uncultured Caudovirales phage OX=2100421 GN=UFOVP699_307 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.79e-10 Identity = 69/152 (45.39%), Postives = 81/152 (53.29%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. ExPASy TrEMBL
Match: A0A6J5KT28 (Collagen triple helix repeat OS=uncultured Caudovirales phage OX=2100421 GN=UFOVP49_234 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.94e-09 Identity = 54/141 (38.30%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of MELO3C004748.jh1 vs. ExPASy TrEMBL
Match: F5UHS5 (Uncharacterized protein OS=Microcoleus vaginatus FGP-2 OX=756067 GN=MicvaDRAFT_2771 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.95e-07 Identity = 63/158 (39.87%), Postives = 68/158 (43.04%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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