MELO3C004724 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004724
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Stress response protein NST1-like
Location	chr12: 11402871 .. 11403266 (+)
RNA-Seq Expression	MELO3C004724
Synteny	MELO3C004724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCTAGCCATGCACCTATCAACCCTCCCATCATCAACTTGGATCCTGAGCATATTGATTTGAATGTCCTTATGGTGAATTTGTCTATTTTTGTATAGAAGACAACAAATGAGGTAGAAATAGTCAACCCTCAGCTTCTTTTGACCGTTTATGACCCACTCTTTCAAGACATCCCTGTTGAGGAAGATGTAGGCGAGACGAGTGTAAAGGAAGAAGCACCTCTAGAGGAAGAGGTACACTTGGAGAAAGACGTCCCTGTGGAGAAAAAAGTTGATCTTCGTGATGTACTTTGTAATGTTATTGTTGAGCCCATGAATGCGGTTTTTAAAGAAGTGCACTTGGGGAATGTGGCGATGAAGAGTCAAATCACCAGCCTTAACACTCAGGTGTAA

mRNA sequence

ATGTCGTCTAGCCATGCACCTATCAACCCTCCCATCATCAACTTGGATCCTGAGCATATTGATTTGAATGTCCTTATGAAGACAACAAATGAGGTAGAAATAGTCAACCCTCAGCTTCTTTTGACCGTTTATGACCCACTCTTTCAAGACATCCCTGTTGAGGAAGATGTAGGCGAGACGAGTGTAAAGGAAGAAGCACCTCTAGAGGAAGAGGTACACTTGGAGAAAGACGTCCCTGTGGAGAAAAAAGTTGATCTTCGTGATGTACTTTGTAATGTTATTGTTGAGCCCATGAATGCGGTTTTTAAAGAAGTGCACTTGGGGAATGTGGCGATGAAGAGTCAAATCACCAGCCTTAACACTCAGGTGTAA

Coding sequence (CDS)

ATGTCGTCTAGCCATGCACCTATCAACCCTCCCATCATCAACTTGGATCCTGAGCATATTGATTTGAATGTCCTTATGAAGACAACAAATGAGGTAGAAATAGTCAACCCTCAGCTTCTTTTGACCGTTTATGACCCACTCTTTCAAGACATCCCTGTTGAGGAAGATGTAGGCGAGACGAGTGTAAAGGAAGAAGCACCTCTAGAGGAAGAGGTACACTTGGAGAAAGACGTCCCTGTGGAGAAAAAAGTTGATCTTCGTGATGTACTTTGTAATGTTATTGTTGAGCCCATGAATGCGGTTTTTAAAGAAGTGCACTTGGGGAATGTGGCGATGAAGAGTCAAATCACCAGCCTTAACACTCAGGTGTAA

Protein sequence

MSSSHAPINPPIINLDPEHIDLNVLMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV

Homology

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BLAST of MELO3C004724 vs. NCBI nr
Match: TYK25721.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 24  VLMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKK 83
           + MKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKK
Sbjct: 401 IAMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKK 460

Query: 84  VDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV 124
           VDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV
Sbjct: 461 VDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV 500

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BLAST of MELO3C004724 vs. NCBI nr
Match: KAA0057618.1 (hypothetical protein E6C27_scaffold1312G00010 [Cucumis melo var. makuwa] >TYK14870.1 hypothetical protein E5676_scaffold1432G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 7.5e-24
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MSSSHAPINPPIINLDPEHIDLNVLM-----------KTTNEVEIVNPQLLLTVYDPLFQ 60
           +S SHAP+NP I NLD EHIDLNV +           K   EV+I++P++ L +Y+PLFQ
Sbjct: 104 VSPSHAPVNPLINNLDLEHIDLNVPIVNFVEGDVFAEKMVEEVKIIDPKIPLIIYNPLFQ 163

Query: 61  DIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEV 106
           DIP+EED+G  S++EEAP +EEV  EK+ P+EK+VDLR+VL N IV+PMNA F EV
Sbjct: 164 DIPIEEDIGMISLEEEAPPDEEVQQEKEAPMEKEVDLRNVLYNFIVKPMNATFTEV 219

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BLAST of MELO3C004724 vs. NCBI nr
Match: KAA0040567.1 (hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK05610.1 hypothetical protein E5676_scaffold98G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 72/127 (56.69%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 8   INPPIINLDPEHIDLNV-----------LMKTTNEVEIVNPQLLLTVYDPLFQDIPVEED 67
           IN  IINLD EHIDLNV           + K   EVEIV+P L L VYDP FQDIP++ED
Sbjct: 45  INLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKED 104

Query: 68  VGETSVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQI 124
            G+TS KEEA  ++E       P EK+V+  DVL NVIVE MNA F EV L NVA K QI
Sbjct: 105 AGKTSSKEEAQSDDE------APTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQI 164

[Close]

BLAST of MELO3C004724 vs. NCBI nr
Match: KAA0059866.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK24818.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 6.6e-20
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 27  KTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKKVDL 86
           + T E+EIV+P+L LT+YD LFQDIPVEE     S KEEAP EEE  LEK+   EK+VDL
Sbjct: 116 RATEEIEIVDPELPLTIYDSLFQDIPVEEGACVKSSKEEAPSEEEAQLEKEAHAEKEVDL 175

Query: 87  RDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSL 120
            +VLCNVI +PMN + KEV L NVAM+ QI +L
Sbjct: 176 LNVLCNVITKPMNTILKEVLLENVAMRDQIATL 208

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BLAST of MELO3C004724 vs. NCBI nr
Match: KAA0063129.1 (hypothetical protein E6C27_scaffold381G00030 [Cucumis melo var. makuwa] >TYK27506.1 hypothetical protein E5676_scaffold1213G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 67/123 (54.47%), Postives = 77/123 (62.60%), Query Frame = 0


Query: 1   MSSSHAPINPPIINLDPEHIDLNVLMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGET 60
           +S SH PIN   INLDPEHIDLNV+                 V +  F  I VEED G+T
Sbjct: 37  VSPSHTPINLTTINLDPEHIDLNVI-----------------VVNFFFYHIFVEEDTGKT 96

Query: 61  SVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLN 120
           S KEEA       LEK+VP EK+V+L DV+ NVI EPMNA FKEV L NVA K Q+TSLN
Sbjct: 97  SSKEEA------QLEKEVPAEKEVELHDVIHNVIAEPMNAAFKEVLLENVATKDQVTSLN 136

Query: 121 TQV 124
           T+V
Sbjct: 157 TEV 136

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BLAST of MELO3C004724 vs. ExPASy TrEMBL
Match: A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.3e-45
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 24  VLMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKK 83
           + MKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKK
Sbjct: 401 IAMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKK 460

Query: 84  VDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV 124
           VDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV
Sbjct: 461 VDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLNTQV 500

[Close]

BLAST of MELO3C004724 vs. ExPASy TrEMBL
Match: A0A5A7UR63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1432G00060 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.6e-24
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MSSSHAPINPPIINLDPEHIDLNVLM-----------KTTNEVEIVNPQLLLTVYDPLFQ 60
           +S SHAP+NP I NLD EHIDLNV +           K   EV+I++P++ L +Y+PLFQ
Sbjct: 104 VSPSHAPVNPLINNLDLEHIDLNVPIVNFVEGDVFAEKMVEEVKIIDPKIPLIIYNPLFQ 163

Query: 61  DIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEV 106
           DIP+EED+G  S++EEAP +EEV  EK+ P+EK+VDLR+VL N IV+PMNA F EV
Sbjct: 164 DIPIEEDIGMISLEEEAPPDEEVQQEKEAPMEKEVDLRNVLYNFIVKPMNATFTEV 219

[Close]

BLAST of MELO3C004724 vs. ExPASy TrEMBL
Match: A0A5D3C2N8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00660 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.0e-23
Identity = 72/127 (56.69%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 8   INPPIINLDPEHIDLNV-----------LMKTTNEVEIVNPQLLLTVYDPLFQDIPVEED 67
           IN  IINLD EHIDLNV           + K   EVEIV+P L L VYDP FQDIP++ED
Sbjct: 45  INLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKED 104

Query: 68  VGETSVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQI 124
            G+TS KEEA  ++E       P EK+V+  DVL NVIVE MNA F EV L NVA K QI
Sbjct: 105 AGKTSSKEEAQSDDE------APTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQI 164

[Close]

BLAST of MELO3C004724 vs. ExPASy TrEMBL
Match: A0A5A7V063 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00700 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.2e-20
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 27  KTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGETSVKEEAPLEEEVHLEKDVPVEKKVDL 86
           + T E+EIV+P+L LT+YD LFQDIPVEE     S KEEAP EEE  LEK+   EK+VDL
Sbjct: 116 RATEEIEIVDPELPLTIYDSLFQDIPVEEGACVKSSKEEAPSEEEAQLEKEAHAEKEVDL 175

Query: 87  RDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSL 120
            +VLCNVI +PMN + KEV L NVAM+ QI +L
Sbjct: 176 LNVLCNVITKPMNTILKEVLLENVAMRDQIATL 208

[Close]

BLAST of MELO3C004724 vs. ExPASy TrEMBL
Match: A0A5A7VBZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1213G00030 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.4e-20
Identity = 67/123 (54.47%), Postives = 77/123 (62.60%), Query Frame = 0


Query: 1   MSSSHAPINPPIINLDPEHIDLNVLMKTTNEVEIVNPQLLLTVYDPLFQDIPVEEDVGET 60
           +S SH PIN   INLDPEHIDLNV+                 V +  F  I VEED G+T
Sbjct: 37  VSPSHTPINLTTINLDPEHIDLNVI-----------------VVNFFFYHIFVEEDTGKT 96

Query: 61  SVKEEAPLEEEVHLEKDVPVEKKVDLRDVLCNVIVEPMNAVFKEVHLGNVAMKSQITSLN 120
           S KEEA       LEK+VP EK+V+L DV+ NVI EPMNA FKEV L NVA K Q+TSLN
Sbjct: 97  SSKEEA------QLEKEVPAEKEVELHDVIHNVIAEPMNAAFKEVLLENVATKDQVTSLN 136

Query: 121 TQV 124
           T+V
Sbjct: 157 TEV 136

The following BLAST results are available for this feature:

BLAST of MELO3C004724 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C004724 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25721.1	1.7e-44	98.00	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0057618.1	7.5e-24	56.03	hypothetical protein E6C27_scaffold1312G00010 [Cucumis melo var. makuwa] >TYK148...	[more]
KAA0040567.1	1.8e-22	56.69	hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK056...	[more]
KAA0059866.1	6.6e-20	61.29	stress response protein NST1-like [Cucumis melo var. makuwa] >TYK24818.1 stress ...	[more]
KAA0063129.1	1.1e-19	54.47	hypothetical protein E6C27_scaffold381G00030 [Cucumis melo var. makuwa] >TYK2750...	[more]

BLAST of MELO3C004724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPW8	8.3e-45	98.00	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UR63	3.6e-24	56.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C2N8	9.0e-23	56.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V063	3.2e-20	61.29	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7VBZ9	5.4e-20	54.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C004724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004724.1	MELO3C004724.1	mRNA