MELO3C004672 (gene) Melon (DHL92) v4

Overview
NameMELO3C004672
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein MNN4-like
Locationchr12: 12469232 .. 12469507 (+)
RNA-Seq ExpressionMELO3C004672
SyntenyMELO3C004672
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGACTTATTTTACAAAGGTTACATCAACATAAAAGAGCATTACACTGCAATCAAGGGAAAGAGGGTAGACTTTGGTCTTGATGCCATCAACGAGTTATATAGGTTGGACAATAATGAAATTGGTCATGTAGTATTCAAGAACCGTAAAGATCGCGATCTACAAGAGGCCTTGGAAAAAGTCACCTGGCCATGGACAAAGTGGGACAGAACACCAACCGGGAAGTACCAACTCTTCCCGCACAATTTCACCACAAAGCAAGTGTGTGGTTGA

mRNA sequence

ATGGTGGACTTATTTTACAAAGGTTACATCAACATAAAAGAGCATTACACTGCAATCAAGGGAAAGAGGGTAGACTTTGGTCTTGATGCCATCAACGAGTTATATAGGTTGGACAATAATGAAATTGGTCATGTAGTATTCAAGAACCGTAAAGATCGCGATCTACAAGAGGCCTTGGAAAAAGTCACCTGGCCATGGACAAAGTGGGACAGAACACCAACCGGGAAGTACCAACTCTTCCCGCACAATTTCACCACAAAGCAAGTGTGTGGTTGA

Coding sequence (CDS)

ATGGTGGACTTATTTTACAAAGGTTACATCAACATAAAAGAGCATTACACTGCAATCAAGGGAAAGAGGGTAGACTTTGGTCTTGATGCCATCAACGAGTTATATAGGTTGGACAATAATGAAATTGGTCATGTAGTATTCAAGAACCGTAAAGATCGCGATCTACAAGAGGCCTTGGAAAAAGTCACCTGGCCATGGACAAAGTGGGACAGAACACCAACCGGGAAGTACCAACTCTTCCCGCACAATTTCACCACAAAGCAAGTGTGTGGTTGA

Protein sequence

MVDLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQLFPHNFTTKQVCG
Homology
BLAST of MELO3C004672 vs. NCBI nr
Match: KAA0035538.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK30998.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 5.4e-35
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0

Query: 20  KGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQL 79
           +GKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQL
Sbjct: 52  EGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQL 111

Query: 80  FPHNFTTKQVCG 92
           FPHN TTKQVCG
Sbjct: 112 FPHNLTTKQVCG 123

BLAST of MELO3C004672 vs. NCBI nr
Match: KAA0053239.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-26
Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 0

Query: 13  KEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRT 72
           +EHY  +KGKRVDFGLDAIN +YRL+NNEIGHV FKN KD +LQ+ALEKVTWP TKWDR 
Sbjct: 118 EEHYAEVKGKRVDFGLDAINAIYRLENNEIGHVTFKNLKDLNLQKALEKVTWPGTKWDRA 177

Query: 73  PTGKYQLFPHNFTTK 88
             GKYQL PHN TTK
Sbjct: 178 QPGKYQLIPHNLTTK 192

BLAST of MELO3C004672 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0

Query: 3   DLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKV 62
           +LFYKGYI+ K+HY  IKGK+V F  + IN LYRLD+N IGH +FKN   +D+Q+AL +V
Sbjct: 180 NLFYKGYISKKKHYVMIKGKKVYFRPEVINALYRLDDNVIGHAIFKNPTQQDMQDALARV 239

Query: 63  TWPWTKWDRTPTGKYQLFPHNFTT 87
           +WP TKWDRTPTGKYQLFPHN  T
Sbjct: 240 SWPGTKWDRTPTGKYQLFPHNLNT 263

BLAST of MELO3C004672 vs. NCBI nr
Match: KAA0047856.1 (hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-25
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 0

Query: 1   MVDLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALE 60
           MV+LFY+GYIN +EHY  +KGKR++FG   IN +Y L NN +GH +FKN KDR+LQEALE
Sbjct: 104 MVNLFYRGYINTEEHYAEVKGKRINFGPSTINVIYGLKNNGLGHGIFKNPKDRNLQEALE 163

Query: 61  KVTWPWTKWDRTPTGKYQLFPHNFTTK 88
           K  W  TKWD+ PT  YQLFPHN TT+
Sbjct: 164 KAKWSGTKWDQIPTYMYQLFPHNLTTE 190

BLAST of MELO3C004672 vs. NCBI nr
Match: KAA0045357.1 (hypothetical protein E6C27_scaffold316G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-24
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 0

Query: 1  MVDLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALE 60
          +V+LFYKGY++ ++ Y  +  K+VDFG DAIN  Y LD+NEIGH +FKN K+++LQE L 
Sbjct: 8  VVNLFYKGYMSEEKQYAMVNEKKVDFGPDAINMFYGLDDNEIGHAIFKNPKEQNLQEGLT 67

Query: 61 KVTWPWTKWDRTPTGKYQLFPHNFTTK 88
          +V WP TKWDRTPT KYQLFPHN  T+
Sbjct: 68 RVAWPGTKWDRTPTRKYQLFPHNLNTE 94

BLAST of MELO3C004672 vs. ExPASy TrEMBL
Match: A0A5A7SY67 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002290 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0

Query: 20  KGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQL 79
           +GKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQL
Sbjct: 52  EGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRTPTGKYQL 111

Query: 80  FPHNFTTKQVCG 92
           FPHN TTKQVCG
Sbjct: 112 FPHNLTTKQVCG 123

BLAST of MELO3C004672 vs. ExPASy TrEMBL
Match: A0A5A7UID3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00240 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26
Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 0

Query: 13  KEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKVTWPWTKWDRT 72
           +EHY  +KGKRVDFGLDAIN +YRL+NNEIGHV FKN KD +LQ+ALEKVTWP TKWDR 
Sbjct: 118 EEHYAEVKGKRVDFGLDAINAIYRLENNEIGHVTFKNLKDLNLQKALEKVTWPGTKWDRA 177

Query: 73  PTGKYQLFPHNFTTK 88
             GKYQL PHN TTK
Sbjct: 178 QPGKYQLIPHNLTTK 192

BLAST of MELO3C004672 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.4e-26
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0

Query: 3   DLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALEKV 62
           +LFYKGYI+ K+HY  IKGK+V F  + IN LYRLD+N IGH +FKN   +D+Q+AL +V
Sbjct: 180 NLFYKGYISKKKHYVMIKGKKVYFRPEVINALYRLDDNVIGHAIFKNPTQQDMQDALARV 239

Query: 63  TWPWTKWDRTPTGKYQLFPHNFTT 87
           +WP TKWDRTPTGKYQLFPHN  T
Sbjct: 240 SWPGTKWDRTPTGKYQLFPHNLNT 263

BLAST of MELO3C004672 vs. ExPASy TrEMBL
Match: A0A5A7U0U4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001210 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.4e-26
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 0

Query: 1   MVDLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALE 60
           MV+LFY+GYIN +EHY  +KGKR++FG   IN +Y L NN +GH +FKN KDR+LQEALE
Sbjct: 104 MVNLFYRGYINTEEHYAEVKGKRINFGPSTINVIYGLKNNGLGHGIFKNPKDRNLQEALE 163

Query: 61  KVTWPWTKWDRTPTGKYQLFPHNFTTK 88
           K  W  TKWD+ PT  YQLFPHN TT+
Sbjct: 164 KAKWSGTKWDQIPTYMYQLFPHNLTTE 190

BLAST of MELO3C004672 vs. ExPASy TrEMBL
Match: A0A5A7TU45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001360 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.4e-25
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 0

Query: 1  MVDLFYKGYINIKEHYTAIKGKRVDFGLDAINELYRLDNNEIGHVVFKNRKDRDLQEALE 60
          +V+LFYKGY++ ++ Y  +  K+VDFG DAIN  Y LD+NEIGH +FKN K+++LQE L 
Sbjct: 8  VVNLFYKGYMSEEKQYAMVNEKKVDFGPDAINMFYGLDDNEIGHAIFKNPKEQNLQEGLT 67

Query: 61 KVTWPWTKWDRTPTGKYQLFPHNFTTK 88
          +V WP TKWDRTPT KYQLFPHN  T+
Sbjct: 68 RVAWPGTKWDRTPTRKYQLFPHNLNTE 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0035538.15.4e-3597.22protein MNN4-like [Cucumis melo var. makuwa] >TYK30998.1 protein MNN4-like [Cucu... [more]
KAA0053239.12.7e-2676.00protein MNN4-like [Cucumis melo var. makuwa][more]
TYK25886.11.3e-2565.48protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0047856.11.7e-2563.22hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa][more]
KAA0045357.11.1e-2460.92hypothetical protein E6C27_scaffold316G001360 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5A7SY672.6e-3597.22Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00... [more]
A0A5A7UID31.3e-2676.00Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00... [more]
A0A5D3DQE56.4e-2665.48Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00... [more]
A0A5A7U0U48.4e-2663.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TU455.4e-2560.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004672.1MELO3C004672.1mRNA