MELO3C004543 (gene) Melon (DHL92) v4

Overview
NameMELO3C004543
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr05: 28162912 .. 28163172 (+)
RNA-Seq ExpressionMELO3C004543
SyntenyMELO3C004543
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGATTTAGGCGATTTAATCAGGAATATCATGATCGTGCCAACAAAGAAGCATGGAGATGCAACGGCCGAGGATATAGAATCTGGTTTTCTGTTGCTTGATCATCCGGAAGCATCGCTTTCGAAAACTGGTTTTCCGGCGGTTTCTGAGGCAGAGTTGCGTCGACTGCGAAGAGTGTGCGACGGCGTATGCGAGGGACATTACGGTGGAGACCGGTGGACGGAGGAATTTGAGAAGGAGAGAAAAGAGGGGAAATGA

mRNA sequence

ATGGTGGATTTAGGCGATTTAATCAGGAATATCATGATCGTGCCAACAAAGAAGCATGGAGATGCAACGGCCGAGGATATAGAATCTGGTTTTCTGTTGCTTGATCATCCGGAAGCATCGCTTTCGAAAACTGGTTTTCCGGCGGTTTCTGAGGCAGAGTTGCGTCGACTGCGAAGAGTGTGCGACGGCGTATGCGAGGGACATTACGGTGGAGACCGGTGGACGGAGGAATTTGAGAAGGAGAGAAAAGAGGGGAAATGA

Coding sequence (CDS)

ATGGTGGATTTAGGCGATTTAATCAGGAATATCATGATCGTGCCAACAAAGAAGCATGGAGATGCAACGGCCGAGGATATAGAATCTGGTTTTCTGTTGCTTGATCATCCGGAAGCATCGCTTTCGAAAACTGGTTTTCCGGCGGTTTCTGAGGCAGAGTTGCGTCGACTGCGAAGAGTGTGCGACGGCGTATGCGAGGGACATTACGGTGGAGACCGGTGGACGGAGGAATTTGAGAAGGAGAGAAAAGAGGGGAAATGA

Protein sequence

MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRVCDGVCEGHYGGDRWTEEFEKERKEGK
Homology
[Close]
BLAST of MELO3C004543 vs. NCBI nr
Match: KAA0061572.1 (hypothetical protein E6C27_scaffold41G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 7.3e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60
          MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV
Sbjct: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60

Query: 61 CDGVCEGHYGGDRWTEEFEKERKEGK 87
          CDGVCEGHYGGDRWTEEFEKERKEGK
Sbjct: 61 CDGVCEGHYGGDRWTEEFEKERKEGK 86

[Close]
BLAST of MELO3C004543 vs. NCBI nr
Match: TYK10702.1 (hypothetical protein E5676_scaffold332G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 3.6e-41
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60
          MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV
Sbjct: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60

Query: 61 CDGVCEGHYGGDRWTEEFEKERKEGK 87
          CDGVCEGHYGGDRWTEE EKERKEGK
Sbjct: 61 CDGVCEGHYGGDRWTEEIEKERKEGK 86

[Close]
BLAST of MELO3C004543 vs. NCBI nr
Match: KAE8651522.1 (hypothetical protein Csa_023920, partial [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-17
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0 

Query: 3  DLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAE 54
          +LGDLI NIMIVPTKKHGDATAEDI+SGFLLLDHPEASLSKTGFPAVS+AE
Sbjct: 1  ELGDLISNIMIVPTKKHGDATAEDIKSGFLLLDHPEASLSKTGFPAVSDAE 51

[Close]
BLAST of MELO3C004543 vs. ExPASy TrEMBL
Match: A0A5A7V070 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001340 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60
          MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV
Sbjct: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60

Query: 61 CDGVCEGHYGGDRWTEEFEKERKEGK 87
          CDGVCEGHYGGDRWTEEFEKERKEGK
Sbjct: 61 CDGVCEGHYGGDRWTEEFEKERKEGK 86

[Close]
BLAST of MELO3C004543 vs. ExPASy TrEMBL
Match: A0A5D3CHF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00110 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60
          MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV
Sbjct: 1  MVDLGDLIRNIMIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELRRLRRV 60

Query: 61 CDGVCEGHYGGDRWTEEFEKERKEGK 87
          CDGVCEGHYGGDRWTEE EKERKEGK
Sbjct: 61 CDGVCEGHYGGDRWTEEIEKERKEGK 86

The following BLAST results are available for this feature:
BLAST of MELO3C004543 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061572.17.3e-42100.00hypothetical protein E6C27_scaffold41G001340 [Cucumis melo var. makuwa][more]
TYK10702.13.6e-4198.84hypothetical protein E5676_scaffold332G00110 [Cucumis melo var. makuwa][more]
KAE8651522.11.6e-1792.16hypothetical protein Csa_023920, partial [Cucumis sativus][more]
BLAST of MELO3C004543 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C004543 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V0703.5e-42100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CHF01.8e-4198.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C004543 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004543.1MELO3C004543.1mRNA