Homology
BLAST of MELO3C004356 vs. NCBI nr
Match:
XP_008455748.1 (PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 4 [Cucumis melo] >KAA0063630.1 5'-3' exoribonuclease 4 [Cucumis melo var. makuwa] >TYK18396.1 5'-3' exoribonuclease 4 [Cucumis melo var. makuwa])
HSP 1 Score: 1605.1 bits (4155), Expect = 0.0e+00
Identity = 771/773 (99.74%), Postives = 772/773 (99.87%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
+ KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 FTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR
Sbjct: 251 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE
Sbjct: 311 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP
Sbjct: 371 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 310
PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC
Sbjct: 431 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 490
Query: 311 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 370
SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT
Sbjct: 491 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 550
Query: 371 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 430
DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI
Sbjct: 551 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 610
Query: 431 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 490
MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV
Sbjct: 611 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 670
Query: 491 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 550
VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN
Sbjct: 671 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 730
Query: 551 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 610
SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF
Sbjct: 731 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 790
Query: 611 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 670
SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH
Sbjct: 791 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 850
Query: 671 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 730
EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS
Sbjct: 851 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 910
Query: 731 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 784
PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ
Sbjct: 911 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 963
BLAST of MELO3C004356 vs. NCBI nr
Match:
XP_011648773.1 (5'-3' exoribonuclease 4 isoform X2 [Cucumis sativus])
HSP 1 Score: 1591.6 bits (4120), Expect = 0.0e+00
Identity = 766/784 (97.70%), Postives = 774/784 (98.72%), Query Frame = 0
Query: 1 MFIYGDALDDYLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
MFIYGDALDDYLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 1 MFIYGDALDDYLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
Query: 61 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKK 120
SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKK
Sbjct: 61 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKK 120
Query: 121 YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI
Sbjct: 121 YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
Query: 181 NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM 240
NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM
Sbjct: 181 NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM 240
Query: 241 RGRARRESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCW 300
RGRARRE+GPPPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEI+QDVVLKYVEGLCW
Sbjct: 241 RGRARRENGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIKQDVVLKYVEGLCW 300
Query: 301 VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTA 360
VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFF+GEPFKPFDQLMGTLPAASSTA
Sbjct: 301 VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTA 360
Query: 361 LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSL 420
LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRF WQGVAKLPFIDERKLLAQTRRLEWSL
Sbjct: 361 LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSL 420
Query: 421 TDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW 480
TDEEKNRNS+MLD+LYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW
Sbjct: 421 TDEEKNRNSVMLDMLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW 480
Query: 481 LCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK 540
LCERNVIRNVV SPI LPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK
Sbjct: 481 LCERNVIRNVVQSPINSLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK 540
Query: 541 PFPTLWHEDNSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPY 600
PFPTLWHEDNSSRRSHGR+RPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPY
Sbjct: 541 PFPTLWHEDNSSRRSHGRDRPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPY 600
Query: 601 SRNFPGPPMFSRPRQVGP-GFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQ 660
SRNFPGPPMFSRPRQVGP GFETGYGEDPNYNYGHYNNYQGAS RPRYSHSSNGMPGDRQ
Sbjct: 601 SRNFPGPPMFSRPRQVGPSGFETGYGEDPNYNYGHYNNYQGASSRPRYSHSSNGMPGDRQ 660
Query: 661 SSRGNDRVQLHEQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQ 720
SSRGNDRVQLHEQYNN+RTGMSALTIEENVRNRS DVLTPGPPPAMLPKMLNVGNSTNQQ
Sbjct: 661 SSRGNDRVQLHEQYNNLRTGMSALTIEENVRNRSPDVLTPGPPPAMLPKMLNVGNSTNQQ 720
Query: 721 NFTQATDTLPSPPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGS 780
NFTQATDTLPSPPHKWINR+PS N MHAR QESFPGGVNEKQVRQMYLAKTPVSQSGSGS
Sbjct: 721 NFTQATDTLPSPPHKWINRSPSANTMHAR-QESFPGGVNEKQVRQMYLAKTPVSQSGSGS 780
Query: 781 GSRQ 784
GSRQ
Sbjct: 781 GSRQ 783
BLAST of MELO3C004356 vs. NCBI nr
Match:
XP_011648772.1 (5'-3' exoribonuclease 4 isoform X1 [Cucumis sativus] >KAE8651565.1 hypothetical protein Csa_019220 [Cucumis sativus])
HSP 1 Score: 1567.4 bits (4057), Expect = 0.0e+00
Identity = 754/774 (97.42%), Postives = 763/774 (98.58%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
+ KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 FTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR
Sbjct: 251 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE
Sbjct: 311 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRE+GP
Sbjct: 371 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRENGP 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 310
PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEI+QDVVLKYVEGLCWVCRYYYSGVC
Sbjct: 431 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIKQDVVLKYVEGLCWVCRYYYSGVC 490
Query: 311 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 370
SWQWYYPYHYSPFASDLKNLADLEITFF+GEPFKPFDQLMGTLPAASSTALPEKYRNLMT
Sbjct: 491 SWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 550
Query: 371 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 430
DPSSPILEFYPSDFEIDMNGKRF WQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNS+
Sbjct: 551 DPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSV 610
Query: 431 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 490
MLD+LYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV
Sbjct: 611 MLDMLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 670
Query: 491 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 550
V SPI LPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN
Sbjct: 671 VQSPINSLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 730
Query: 551 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 610
SSRRSHGR+RPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF
Sbjct: 731 SSRRSHGRDRPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 790
Query: 611 SRPRQVGP-GFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQL 670
SRPRQVGP GFETGYGEDPNYNYGHYNNYQGAS RPRYSHSSNGMPGDRQSSRGNDRVQL
Sbjct: 791 SRPRQVGPSGFETGYGEDPNYNYGHYNNYQGASSRPRYSHSSNGMPGDRQSSRGNDRVQL 850
Query: 671 HEQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLP 730
HEQYNN+RTGMSALTIEENVRNRS DVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLP
Sbjct: 851 HEQYNNLRTGMSALTIEENVRNRSPDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLP 910
Query: 731 SPPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 784
SPPHKWINR+PS N MHAR QESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ
Sbjct: 911 SPPHKWINRSPSANTMHAR-QESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 963
BLAST of MELO3C004356 vs. NCBI nr
Match:
ADN33909.1 (5'-3' exoribonuclease [Cucumis melo subsp. melo])
HSP 1 Score: 1536.9 bits (3978), Expect = 0.0e+00
Identity = 742/773 (95.99%), Postives = 743/773 (96.12%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
+ KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 FTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR
Sbjct: 251 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE
Sbjct: 311 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
FPAIGGYLTDAGE AQENNEEMRGRARRESGP
Sbjct: 371 FPAIGGYLTDAGE-----------------------------AQENNEEMRGRARRESGP 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 310
PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC
Sbjct: 431 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 490
Query: 311 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 370
SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT
Sbjct: 491 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 550
Query: 371 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 430
DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI
Sbjct: 551 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 610
Query: 431 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 490
MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV
Sbjct: 611 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 670
Query: 491 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 550
VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN
Sbjct: 671 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 730
Query: 551 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 610
SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF
Sbjct: 731 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 790
Query: 611 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 670
SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH
Sbjct: 791 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 850
Query: 671 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 730
EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS
Sbjct: 851 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 910
Query: 731 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 784
PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ
Sbjct: 911 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 934
BLAST of MELO3C004356 vs. NCBI nr
Match:
XP_038891197.1 (5'-3' exoribonuclease 4 isoform X3 [Benincasa hispida])
HSP 1 Score: 1508.8 bits (3905), Expect = 0.0e+00
Identity = 731/784 (93.24%), Postives = 752/784 (95.92%), Query Frame = 0
Query: 1 MFIYGDALDDYLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
MFIYGDALD YLKVILSDSNVPGEGEHKIMQYIRLQR+LPGFDPNTRHCLYGLDADLIML
Sbjct: 1 MFIYGDALDGYLKVILSDSNVPGEGEHKIMQYIRLQRDLPGFDPNTRHCLYGLDADLIML 60
Query: 61 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKK 120
SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPED N ADETPIHKKK
Sbjct: 61 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDCNAADETPIHKKK 120
Query: 121 YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI
Sbjct: 121 YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
Query: 181 NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM 240
NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM
Sbjct: 181 NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM 240
Query: 241 RGRARRESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCW 300
RGRARRE+GP PPP T+DKIKLGEPGYKERYYAEKFNA+P NIAEI+QDVVLKYVEGLCW
Sbjct: 241 RGRARRENGPAPPPLTIDKIKLGEPGYKERYYAEKFNASPENIAEIKQDVVLKYVEGLCW 300
Query: 301 VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTA 360
VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFF+GEPFKPFDQLMGTLPAASSTA
Sbjct: 301 VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTA 360
Query: 361 LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSL 420
LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRF WQGVAKLPFIDERKLLAQTRRLE SL
Sbjct: 361 LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESSL 420
Query: 421 TDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW 480
TDEEKNRNS+MLDLLYTHC HPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW
Sbjct: 421 TDEEKNRNSVMLDLLYTHCAHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW 480
Query: 481 LCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK 540
LCERNVIRNVVPSPI GLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK
Sbjct: 481 LCERNVIRNVVPSPINGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK 540
Query: 541 PFPTLWHEDNSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPY 600
PFPTLWHEDN+SRR HGRERP+VPGAIAGPLLGEAAHRLVKNTLNIK NGSSSG FEQPY
Sbjct: 541 PFPTLWHEDNNSRRYHGRERPQVPGAIAGPLLGEAAHRLVKNTLNIKPNGSSSGLFEQPY 600
Query: 601 SRNFPGPPMFSRPRQVG-PGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQ 660
SRNFPG PMFSRPRQVG PG+ETGYGEDPNY YGHY+NYQ ASGRPRYSHSSNGMPGDRQ
Sbjct: 601 SRNFPGLPMFSRPRQVGSPGYETGYGEDPNYIYGHYSNYQSASGRPRYSHSSNGMPGDRQ 660
Query: 661 SSRGNDRVQLHEQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQ 720
SSRGNDRV E+Y NVRTGMSALTIEE+VRNRS DVLT GPPP MLPKML VGNS NQQ
Sbjct: 661 SSRGNDRVPQQERY-NVRTGMSALTIEESVRNRSPDVLTRGPPPVMLPKMLKVGNSANQQ 720
Query: 721 NFTQATDTLPSPPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGS 780
NF+QATD LPSPPHKWINRAPS ++++ RQQESF GGVNEKQ +Q+YLAK+P SQSGSGS
Sbjct: 721 NFSQATDALPSPPHKWINRAPSASLIYTRQQESFLGGVNEKQSKQVYLAKSPASQSGSGS 780
Query: 781 GSRQ 784
GSRQ
Sbjct: 781 GSRQ 783
BLAST of MELO3C004356 vs. ExPASy Swiss-Prot
Match:
Q9FQ04 (5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1)
HSP 1 Score: 973.8 bits (2516), Expect = 1.2e-282
Identity = 499/784 (63.65%), Postives = 588/784 (75.00%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
Y+KVILSDSNVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 YVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVI PGQQEKC+ CG+ GH A++C GKS N A + PIHKKKYQFLNIWVLR
Sbjct: 251 ILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSN---NAAADIPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYEL IP+PPF INFERI+DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH+YRKE
Sbjct: 311 EYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
F A+GGYLTD+GEVLLD+VEHFIQAVAV+ED+IFQKR RI+Q+ +NNEEM+ R+RR+
Sbjct: 371 FTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQRSRRDPSE 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFN-ANPANIAEIRQDVVLKYVEGLCWVCRYYYSGV 310
PP P DKIKLGEPGYKERYYAEKF+ NP +I+QD+VLKYVEGLCWVCRYYY GV
Sbjct: 431 VPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGV 490
Query: 311 CSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLM 370
CSWQW+YPYHY+PFASDLKNL DLEITFF+GEPFKPFDQLMGTLPAASS ALP +YR LM
Sbjct: 491 CSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLM 550
Query: 371 TDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNS 430
TDPSSPIL+FYP+DFE+DMNGKRF WQG+AKLPFI+E+ LLA TR+LE +LT EE+ RNS
Sbjct: 551 TDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNS 610
Query: 431 IMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRN 490
+MLDLLY H HPL +I YY +PPH W+ID N+S GMNG+LW ERN +
Sbjct: 611 VMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWFSERNGFQT 670
Query: 491 VVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHED 550
V SP+ GLP I+ N+ LNVTYL P KH HI EPP+GAIIP K+L+S+DIKPFP LWHED
Sbjct: 671 RVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWHED 730
Query: 551 NSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSN-GSSSGFFE-QPYSRNFPGP 610
NS+RR R+RP+V GAIAGP LGEAAHRL+KNTLN+KS+ G++SG + Y RN PG
Sbjct: 731 NSNRRRQARDRPQVVGAIAGPSLGEAAHRLIKNTLNMKSSTGAASGLIDPNGYYRNVPGN 790
Query: 611 PMF---SRPRQVGPG-FETGYGEDPNYNYGHYNN-YQGA-SGRPRYSHSSNGMPGDRQSS 670
+ +RPR GP + Y +D +Y YG YNN QG + PRY + SN G + +
Sbjct: 791 YSYGGVNRPRAPGPSPYRKAYDDDSSYYYGKYNNSTQGTFNNGPRYPYPSN---GSQDYN 850
Query: 671 RGNDRVQLHEQYN--NVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQ 730
R + + EQ+N + GMS L+IE+N R++
Sbjct: 851 RNYNSKIVAEQHNRGGLGAGMSGLSIEDNGRSKQL-----------------------YS 910
Query: 731 NFTQATDT----LPSPPHKWINRAPSGNIMHARQQESFP-GGVNEKQVRQ-MYLAKTPVS 778
++T+A + LPSPP +WI P GN + ++ N K V++ +Y AKT S
Sbjct: 911 SYTEAANANLNPLPSPPTQWIGTQPGGNFVGGYYRDGVGYSETNGKSVKKVIYQAKTQPS 945
BLAST of MELO3C004356 vs. ExPASy Swiss-Prot
Match:
Q9FQ03 (5'-3' exoribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=XRN3 PE=1 SV=1)
HSP 1 Score: 667.5 bits (1721), Expect = 1.8e-190
Identity = 379/787 (48.16%), Postives = 458/787 (58.20%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
+KVILSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML LATHEVHFSI
Sbjct: 191 IKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSI 250
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDWNGADETPIHKKKYQFLNIWV 131
LREV+ PGQQE+C+ CG++GH A+ C GK G D G D KK YQFL+IWV
Sbjct: 251 LREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKG-DGNDFVKKPYQFLHIWV 310
Query: 132 LREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYR 191
LREYL+ E+ IPNPPFEI+ ERIVDDF+F+CFFVGNDFLPHMPTLEIREGAINLLM +Y+
Sbjct: 311 LREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYK 370
Query: 192 KEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRA--RIQQAQENNEEMRGRA-- 251
KEF + GYLTD + L +VE FIQAV ED+IFQKRA +QA+ + G+A
Sbjct: 371 KEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKATK 430
Query: 252 ----------------------RRESGPPPPP---------------------------- 311
R S P P P
Sbjct: 431 RMDDEAPTVQPDLVPVARFSGSRLASAPTPSPFQSNDGRSAPHQKVRRLSPGSSVGAAIV 490
Query: 312 ------------------------------------PTVDKIKLGEPGYKERYYAEKFN- 371
DK+KLG+PG++ERYY EKF+
Sbjct: 491 DVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEEDKVKLGQPGWRERYYEEKFSV 550
Query: 372 ANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITF 431
P + +R+DVVLKY EGLCWV YY GVCSWQW+YPYHY+PFASDLK+L +++I F
Sbjct: 551 VTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKF 610
Query: 432 FLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQG 491
LG PFKPF+QL+G PAASS ALPE+YR LMTDP+SPI++FYP+DFE+DMNGKRF WQG
Sbjct: 611 ELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQG 670
Query: 492 VAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQL 551
+AKLPFIDER+LL +E++LTDEEK RNS M D+L+ +H L+ +FS QL
Sbjct: 671 IAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQL 730
Query: 552 PPHARTCW--VIDTNASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQ 611
R + I S GMNGYL C V SP+ G+ DI NQV+ Y P
Sbjct: 731 SARERVDFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPD 790
Query: 612 KHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDNSSRRSH---------------GRER 671
H+HI PP G I PKK + D+KP P LWHEDN R H GR+
Sbjct: 791 AHEHITRPPPGVIFPKKTVDIGDLKPPPALWHEDNGRRPMHNNHGMHNNHGMHNNQGRQN 850
Query: 672 PRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPG----PPMFSRP--- 673
P PG+++G LG AAHRLV N+L + ++ ++ P PG PP + P
Sbjct: 851 P--PGSVSGRHLGNAAHRLVSNSLQMGTDR-----YQTPTDVPAPGYGYNPPQYVPPIPY 910
BLAST of MELO3C004356 vs. ExPASy Swiss-Prot
Match:
Q9FQ02 (5'-3' exoribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=XRN2 PE=1 SV=1)
HSP 1 Score: 570.5 bits (1469), Expect = 3.0e-161
Identity = 302/667 (45.28%), Postives = 405/667 (60.72%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
+KVILSD+NVPGEGEHKIM YIR +N PG++PNT HCLYGLDADLIMLSLATHE+HFSI
Sbjct: 193 IKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSI 252
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRG--KSDGPEDWNGADETPIHKKKYQFLNIWVL 131
LREV+ PG++ KC+ CG+ GH AA+C G K E + + + KK Y+F+NIW+L
Sbjct: 253 LREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWIL 312
Query: 132 REYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRK 191
REYL++++ IP + N +R++DDF+F+CFFVGNDFLPHMPTLEIREGAI LLM +Y+
Sbjct: 313 REYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKN 372
Query: 192 EFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQ--------------- 251
+F + YLTD+ ++ L VE FI+AV ++E+QIFQKRA++QQ Q
Sbjct: 373 KFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSERFRRDKARDKARD 432
Query: 252 ------------------------------------------------------------ 311
Sbjct: 433 NARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAE 492
Query: 312 --ENNEEMRGRAR-----RESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPA-NIAEI 371
+N E+++ + + + G DK+KL + G++ERYY EKF A + +I
Sbjct: 493 ELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQI 552
Query: 372 RQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPF 431
R+DVVLKY EGLCW+ YYY GVCSW W+YPYHY+PFASDLK L L+I F LG PFKPF
Sbjct: 553 RRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPF 612
Query: 432 DQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDE 491
+QL+ LP+AS+ ALPE YR+LMT+P SPI +FYP+DFEIDMNGKR+ WQG++KLPF++E
Sbjct: 613 NQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEE 672
Query: 492 RKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWV 551
++LL ++E SLT+EE RNS + D+L+ +HPL I S + L R +
Sbjct: 673 KRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATII 732
Query: 552 --IDTNASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQ--KHKHIPE 586
ID S GMNGY+ C + + S + G+ D+ NQV+ Y P+ + I
Sbjct: 733 EKIDPGLSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITH 792
BLAST of MELO3C004356 vs. ExPASy Swiss-Prot
Match:
Q5ZIP4 (5'-3' exoribonuclease 2 OS=Gallus gallus OX=9031 GN=XRN2 PE=2 SV=1)
HSP 1 Score: 429.5 bits (1103), Expect = 8.2e-119
Identity = 271/689 (39.33%), Postives = 366/689 (53.12%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
L VILSD++ PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE HF+I
Sbjct: 191 LTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPHFTI 250
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRG---KSDGPEDWNGADETPIHKKKYQFLNIWV 131
+RE P + + C C ++GH +C+G + G D AD P ++++ F+ + V
Sbjct: 251 IREEFK-PNKPKPCALCNQMGHEVKDCQGLPREKQGKHD-QFADSLPASEQEFIFIRLCV 310
Query: 132 LREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYR 191
LREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREGAI+ L++IY+
Sbjct: 311 LREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 370
Query: 192 KEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKR--------------------- 251
GGYLT++G V L +V+ + AV ED IF+KR
Sbjct: 371 NVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEKKKRMKRD 430
Query: 252 ---------------------ARIQQAQENNEEMRGRARRES------------GPPPP- 311
I ++ EMR R+ S G P P
Sbjct: 431 HPSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNSTMSSPNTSLNSDGSPSPA 490
Query: 312 -------------PPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCW 371
P D I+L E G+K+RYY KF+ + A+ + R+ VV YVEGLCW
Sbjct: 491 RGIKRKSEDSDSEPEPEDNIRLWESGWKQRYYKNKFDVD-ASDEKFRRKVVQSYVEGLCW 550
Query: 372 VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLG-EPFKPFDQLMGTLPAASST 431
V RYYY G SW WYYP+HY+PFASD + +AD+ F G +PFKP +QLMG PAAS
Sbjct: 551 VLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGN 610
Query: 432 ALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWS 491
LP +R LMTDP S I++FYP DF ID+NGK++ WQGVA LPF+DER+L A +
Sbjct: 611 FLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPD 670
Query: 492 LTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVAS----QLPPHARTCWVIDTNASGGM 551
LT EE RNS+ D+L+ HPL I Y+ + +PP C+ G+
Sbjct: 671 LTPEENRRNSLGGDVLFVGKHHPLCDFIVEQYKSKNTEPVDMPP--ELCY--------GI 730
Query: 552 NGYLWLCERNVIRN-VVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVL 611
G L E V+ + V SP+ L D+ N +++++ +PQ + K ++P
Sbjct: 731 QGKLTPNENAVLPDKTVESPVPMLRDLTQNSAVSISFKDPQFDEDFIF--KATVLPGAKK 790
Query: 612 SSLDIKPFPTLWHEDNSS----RRSHGRERPRVPGAI---AGPLLGEAAHRLVKNTLNIK 617
+KP W + N+ R G R R P + A LG A R + +
Sbjct: 791 PPPVLKPGD--WEKTNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHAMPR-ERGMPGMY 850
BLAST of MELO3C004356 vs. ExPASy Swiss-Prot
Match:
Q9DBR1 (5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1)
HSP 1 Score: 421.0 bits (1081), Expect = 2.9e-116
Identity = 240/578 (41.52%), Postives = 321/578 (55.54%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
L VILSD++ PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I
Sbjct: 191 LTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTI 250
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRG---KSDGPEDWNGADETPIHKKKYQFLNIWV 131
+RE P + + C C + GH +C G + G D AD P + ++ FL + V
Sbjct: 251 IREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHD-ELADSLPCAEGEFIFLRLNV 310
Query: 132 LREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYR 191
LREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L++IY+
Sbjct: 311 LREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 370
Query: 192 KEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQA-QENNEEMRGRARRE 251
GGYLT++G V L +V+ + AV ED IF+KR + + + +E R R +R+
Sbjct: 371 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD 430
Query: 252 ------------------------------------------------------SGPPPP 311
G P P
Sbjct: 431 QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEMRMQRNSSPSISPNTSFASDGSPSP 490
Query: 312 --------------PPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLC 371
P D ++L E G+K+RYY KF+ + A+ + R+ VV YVEGLC
Sbjct: 491 LGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAAD-EKFRRKVVQSYVEGLC 550
Query: 372 WVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLG-EPFKPFDQLMGTLPAASS 431
WV RYYY G SW+WYYP+HY+PFASD + +AD+ F G +PFKP +QLMG PAAS
Sbjct: 551 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASG 610
Query: 432 TALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEW 491
LP +R LM+DP S I++FYP DF ID+NGK++ WQGVA LPF+DER+L A +
Sbjct: 611 NFLPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYP 670
Query: 492 SLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGY 516
LT EE RNS+ D+L+ HPL I YQ S P + G+ G
Sbjct: 671 DLTPEENRRNSLGGDVLFVGKLHPLRDFILELYQTGSTEPVD------VPPELCHGIQGT 730
BLAST of MELO3C004356 vs. ExPASy TrEMBL
Match:
A0A5A7V8W9 (5'-3' exoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001200 PE=3 SV=1)
HSP 1 Score: 1605.1 bits (4155), Expect = 0.0e+00
Identity = 771/773 (99.74%), Postives = 772/773 (99.87%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
+ KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 FTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR
Sbjct: 251 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE
Sbjct: 311 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP
Sbjct: 371 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 310
PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC
Sbjct: 431 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 490
Query: 311 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 370
SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT
Sbjct: 491 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 550
Query: 371 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 430
DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI
Sbjct: 551 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 610
Query: 431 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 490
MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV
Sbjct: 611 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 670
Query: 491 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 550
VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN
Sbjct: 671 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 730
Query: 551 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 610
SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF
Sbjct: 731 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 790
Query: 611 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 670
SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH
Sbjct: 791 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 850
Query: 671 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 730
EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS
Sbjct: 851 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 910
Query: 731 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 784
PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ
Sbjct: 911 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 963
BLAST of MELO3C004356 vs. ExPASy TrEMBL
Match:
A0A1S3C1K3 (5'-3' exoribonuclease OS=Cucumis melo OX=3656 GN=LOC103495846 PE=3 SV=1)
HSP 1 Score: 1605.1 bits (4155), Expect = 0.0e+00
Identity = 771/773 (99.74%), Postives = 772/773 (99.87%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
+ KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 FTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR
Sbjct: 251 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE
Sbjct: 311 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP
Sbjct: 371 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 310
PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC
Sbjct: 431 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 490
Query: 311 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 370
SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT
Sbjct: 491 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 550
Query: 371 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 430
DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI
Sbjct: 551 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 610
Query: 431 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 490
MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV
Sbjct: 611 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 670
Query: 491 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 550
VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN
Sbjct: 671 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 730
Query: 551 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 610
SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF
Sbjct: 731 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 790
Query: 611 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 670
SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH
Sbjct: 791 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 850
Query: 671 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 730
EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS
Sbjct: 851 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 910
Query: 731 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 784
PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ
Sbjct: 911 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 963
BLAST of MELO3C004356 vs. ExPASy TrEMBL
Match:
E5GBR7 (5'-3' exoribonuclease OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)
HSP 1 Score: 1536.9 bits (3978), Expect = 0.0e+00
Identity = 742/773 (95.99%), Postives = 743/773 (96.12%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
+ KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 FTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR
Sbjct: 251 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE
Sbjct: 311 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
FPAIGGYLTDAGE AQENNEEMRGRARRESGP
Sbjct: 371 FPAIGGYLTDAGE-----------------------------AQENNEEMRGRARRESGP 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 310
PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC
Sbjct: 431 PPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVC 490
Query: 311 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 370
SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT
Sbjct: 491 SWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMT 550
Query: 371 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 430
DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI
Sbjct: 551 DPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSI 610
Query: 431 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 490
MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV
Sbjct: 611 MLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRNV 670
Query: 491 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 550
VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN
Sbjct: 671 VPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDN 730
Query: 551 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 610
SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF
Sbjct: 731 SSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPPMF 790
Query: 611 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 670
SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH
Sbjct: 791 SRPRQVGPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDRQSSRGNDRVQLH 850
Query: 671 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 730
EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS
Sbjct: 851 EQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQNFTQATDTLPS 910
Query: 731 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 784
PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ
Sbjct: 911 PPHKWINRAPSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSGSGSGSRQ 934
BLAST of MELO3C004356 vs. ExPASy TrEMBL
Match:
A0A6J1KEW9 (5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493680 PE=3 SV=1)
HSP 1 Score: 1463.0 bits (3786), Expect = 0.0e+00
Identity = 705/786 (89.69%), Postives = 736/786 (93.64%), Query Frame = 0
Query: 1 MFIYGDALDDYLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
MFIYGDA DDYLKVILSDSNVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 1 MFIYGDAFDDYLKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
Query: 61 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKK 120
SLATHE+HFSILREVIMLPGQQEKC+NCGKVGH AAECRGKSDGPEDWN ADETPIHKKK
Sbjct: 61 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 120
Query: 121 YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
YQFLNIWVLREYLQYELDIPNPPFE++FERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI
Sbjct: 121 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
Query: 181 NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEM 240
NLLMHIYRKEFPA+GGYLTDAGEV+LDKVEHFIQAV+VHE+QIFQKRARIQQAQENNEEM
Sbjct: 181 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQAQENNEEM 240
Query: 241 RGRARRESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCW 300
RGRARRE+GP PP PT+DKIKLGEPGYKERYYAEKFNAN NIAEI+QDVVLKYVEGLCW
Sbjct: 241 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 300
Query: 301 VCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTA 360
VCRYYYSGVCSWQWYYPYHYSPFASDL+NLADLEITFF+GEPFKPFDQLMGTLPAASSTA
Sbjct: 301 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFIGEPFKPFDQLMGTLPAASSTA 360
Query: 361 LPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSL 420
LPEKYRNLMTD SSPILEFYPSDFEIDMNGKRF WQGVAKLPFIDERKLLAQTRRLE SL
Sbjct: 361 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESSL 420
Query: 421 TDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLW 480
TDEEKNRNS+MLDLLYTHC HPLSAQ+FSYYQVASQLPP RTCWVIDTNASGGMNGYLW
Sbjct: 421 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 480
Query: 481 LCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIK 540
LCERNV RNV PSPI LPDIQ NQVLNVTYLNPQKH+HIP PPKG IIPKKVLSSLDIK
Sbjct: 481 LCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQKHEHIPRPPKGVIIPKKVLSSLDIK 540
Query: 541 PFPTLWHEDNSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSS-SGFFEQP 600
PFPTLWHEDN+SRR HGRERP+VP AIAGPLLGEAAHRLVKNTLNIK NG S SG F+QP
Sbjct: 541 PFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGEAAHRLVKNTLNIKPNGGSLSGLFDQP 600
Query: 601 YSRNFPGPPMFSRPRQV-GPGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGDR 660
YSRNFPG P+FSRPRQV G+ETGYGEDPNY+YGHYNNYQGASGRPRY +SSNGMPGDR
Sbjct: 601 YSRNFPGQPIFSRPRQVASSGYETGYGEDPNYSYGHYNNYQGASGRPRYPNSSNGMPGDR 660
Query: 661 QSSRGNDRVQLHEQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQ 720
Q SRGNDRVQ E+YNNVRTGMSALTIEE++RNRS D+LTPG P M+PKMLNVGNS NQ
Sbjct: 661 QISRGNDRVQHQERYNNVRTGMSALTIEESMRNRSLDMLTPGLSPVMMPKMLNVGNSANQ 720
Query: 721 QNFTQATDTLPSPPHKWINRA--PSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQSG 780
QNF QATD LPSPPHKWINRA PS NIM+ARQQE+F GG NEKQ +QMYLAKTP QSG
Sbjct: 721 QNFAQATDALPSPPHKWINRAPTPSANIMYARQQENFTGGANEKQAKQMYLAKTPAFQSG 780
Query: 781 SGSGSR 783
SGSGSR
Sbjct: 781 SGSGSR 786
BLAST of MELO3C004356 vs. ExPASy TrEMBL
Match:
A0A6J1G444 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1)
HSP 1 Score: 1451.4 bits (3756), Expect = 0.0e+00
Identity = 704/789 (89.23%), Postives = 739/789 (93.66%), Query Frame = 0
Query: 1 MFIYGDALDDYLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
MFIYGDA DDYLKVILSDSNVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 1 MFIYGDAFDDYLKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 60
Query: 61 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKK 120
SLATHE+HFSILREVIMLPGQQEKC+NCGKVGH AAECRGKSDGPEDWN ADETPIHKKK
Sbjct: 61 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 120
Query: 121 YQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
YQFLNIWVLREYLQYELDIPNPPFE++FERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI
Sbjct: 121 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 180
Query: 181 NLLMHIYRKEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARI-QQAQENNEE 240
NLLMHIYRKEFPA+GGYLTDAGEV+LDKVEHFIQAV+VHE+QIFQKRARI QQAQENNEE
Sbjct: 181 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQQAQENNEE 240
Query: 241 MRGRARRESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLC 300
MRGRARRE+GP PP PT+DKIKLGEPGYKERYYAEKFNAN NIAEI+QDVVLKYVEGLC
Sbjct: 241 MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC 300
Query: 301 WVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASST 360
WVCRYYYSGVCSWQWYYPYHYSPFASDL+NLADLEITFFLGEPFKPFDQLMGTLPAASST
Sbjct: 301 WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST 360
Query: 361 ALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWS 420
ALPEKYRNLMTD SSPILEFYPSDFEIDMNGKRF WQGVAKLPFIDERKLLAQTRRLE +
Sbjct: 361 ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA 420
Query: 421 LTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYL 480
LTDEEKNRNS+MLDLLYTHC HPLSAQ+FSYYQVASQLPP RTCWVIDTNASGGMNGYL
Sbjct: 421 LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL 480
Query: 481 WLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDI 540
WLCERNV RNV PSPI LPDIQ NQVLNVTYLNPQKH+H+P PPKG IIPKKVLSSLDI
Sbjct: 481 WLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQKHEHVPRPPKGVIIPKKVLSSLDI 540
Query: 541 KPFPTLWHEDNSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSN-GSSSGFFEQ 600
KPFPTLWHEDN+SRR HGRERP+VP AIAGPLLGEAAHRLVKNTLNIK N GSSSG F+Q
Sbjct: 541 KPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQ 600
Query: 601 PYSRNFPGPPMFSRPRQVG-PGFETGYGEDPNYNYGHYNNYQGASGRPRYSHSSNGMPGD 660
PYSRNFPG P+FSRPRQVG G+ETGYGEDPNY+YGHYNNYQGASGRPRY +SSNGMPGD
Sbjct: 601 PYSRNFPGQPIFSRPRQVGSSGYETGYGEDPNYSYGHYNNYQGASGRPRYPNSSNGMPGD 660
Query: 661 -RQSSRGNDRVQLHEQYNNVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNST 720
RQ+SRGND +Q E+YNNVRTGMSALTIEE++RNRS D+LTPG P M+PKMLNVGNS
Sbjct: 661 NRQTSRGND-IQHQERYNNVRTGMSALTIEESMRNRSLDMLTPGLSPMMMPKMLNVGNSA 720
Query: 721 NQQNFTQATDTLPSPPHKWINRA--PSGNIMHARQQESFPGGVNEKQVRQMYLAKTPVSQ 780
NQQNF QATD LPSPPHKWINRA P+ NIM+ARQQE+F GG NEKQ +QMYLAKTP Q
Sbjct: 721 NQQNFAQATDALPSPPHKWINRAPTPTANIMYARQQENFTGGANEKQAKQMYLAKTPAFQ 780
Query: 781 SGSGSGSRQ 784
SGSGSGSRQ
Sbjct: 781 SGSGSGSRQ 788
BLAST of MELO3C004356 vs. TAIR 10
Match:
AT1G54490.1 (exoribonuclease 4 )
HSP 1 Score: 973.8 bits (2516), Expect = 8.3e-284
Identity = 499/784 (63.65%), Postives = 588/784 (75.00%), Query Frame = 0
Query: 11 YLKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 70
Y+KVILSDSNVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS
Sbjct: 191 YVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFS 250
Query: 71 ILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLR 130
ILREVI PGQQEKC+ CG+ GH A++C GKS N A + PIHKKKYQFLNIWVLR
Sbjct: 251 ILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSN---NAAADIPIHKKKYQFLNIWVLR 310
Query: 131 EYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKE 190
EYLQYEL IP+PPF INFERI+DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH+YRKE
Sbjct: 311 EYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRKE 370
Query: 191 FPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQENNEEMRGRARRESGP 250
F A+GGYLTD+GEVLLD+VEHFIQAVAV+ED+IFQKR RI+Q+ +NNEEM+ R+RR+
Sbjct: 371 FTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQRSRRDPSE 430
Query: 251 PPPPPTVDKIKLGEPGYKERYYAEKFN-ANPANIAEIRQDVVLKYVEGLCWVCRYYYSGV 310
PP P DKIKLGEPGYKERYYAEKF+ NP +I+QD+VLKYVEGLCWVCRYYY GV
Sbjct: 431 VPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGV 490
Query: 311 CSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLM 370
CSWQW+YPYHY+PFASDLKNL DLEITFF+GEPFKPFDQLMGTLPAASS ALP +YR LM
Sbjct: 491 CSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLM 550
Query: 371 TDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNS 430
TDPSSPIL+FYP+DFE+DMNGKRF WQG+AKLPFI+E+ LLA TR+LE +LT EE+ RNS
Sbjct: 551 TDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNS 610
Query: 431 IMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRN 490
+MLDLLY H HPL +I YY +PPH W+ID N+S GMNG+LW ERN +
Sbjct: 611 VMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWFSERNGFQT 670
Query: 491 VVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHED 550
V SP+ GLP I+ N+ LNVTYL P KH HI EPP+GAIIP K+L+S+DIKPFP LWHED
Sbjct: 671 RVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWHED 730
Query: 551 NSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKNTLNIKSN-GSSSGFFE-QPYSRNFPGP 610
NS+RR R+RP+V GAIAGP LGEAAHRL+KNTLN+KS+ G++SG + Y RN PG
Sbjct: 731 NSNRRRQARDRPQVVGAIAGPSLGEAAHRLIKNTLNMKSSTGAASGLIDPNGYYRNVPGN 790
Query: 611 PMF---SRPRQVGPG-FETGYGEDPNYNYGHYNN-YQGA-SGRPRYSHSSNGMPGDRQSS 670
+ +RPR GP + Y +D +Y YG YNN QG + PRY + SN G + +
Sbjct: 791 YSYGGVNRPRAPGPSPYRKAYDDDSSYYYGKYNNSTQGTFNNGPRYPYPSN---GSQDYN 850
Query: 671 RGNDRVQLHEQYN--NVRTGMSALTIEENVRNRSSDVLTPGPPPAMLPKMLNVGNSTNQQ 730
R + + EQ+N + GMS L+IE+N R++
Sbjct: 851 RNYNSKIVAEQHNRGGLGAGMSGLSIEDNGRSKQL-----------------------YS 910
Query: 731 NFTQATDT----LPSPPHKWINRAPSGNIMHARQQESFP-GGVNEKQVRQ-MYLAKTPVS 778
++T+A + LPSPP +WI P GN + ++ N K V++ +Y AKT S
Sbjct: 911 SYTEAANANLNPLPSPPTQWIGTQPGGNFVGGYYRDGVGYSETNGKSVKKVIYQAKTQPS 945
BLAST of MELO3C004356 vs. TAIR 10
Match:
AT1G75660.1 (5'-3' exoribonuclease 3 )
HSP 1 Score: 667.5 bits (1721), Expect = 1.3e-191
Identity = 379/787 (48.16%), Postives = 458/787 (58.20%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
+KVILSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML LATHEVHFSI
Sbjct: 191 IKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSI 250
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDWNGADETPIHKKKYQFLNIWV 131
LREV+ PGQQE+C+ CG++GH A+ C GK G D G D KK YQFL+IWV
Sbjct: 251 LREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKG-DGNDFVKKPYQFLHIWV 310
Query: 132 LREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYR 191
LREYL+ E+ IPNPPFEI+ ERIVDDF+F+CFFVGNDFLPHMPTLEIREGAINLLM +Y+
Sbjct: 311 LREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYK 370
Query: 192 KEFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRA--RIQQAQENNEEMRGRA-- 251
KEF + GYLTD + L +VE FIQAV ED+IFQKRA +QA+ + G+A
Sbjct: 371 KEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKATK 430
Query: 252 ----------------------RRESGPPPPP---------------------------- 311
R S P P P
Sbjct: 431 RMDDEAPTVQPDLVPVARFSGSRLASAPTPSPFQSNDGRSAPHQKVRRLSPGSSVGAAIV 490
Query: 312 ------------------------------------PTVDKIKLGEPGYKERYYAEKFN- 371
DK+KLG+PG++ERYY EKF+
Sbjct: 491 DVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEEDKVKLGQPGWRERYYEEKFSV 550
Query: 372 ANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITF 431
P + +R+DVVLKY EGLCWV YY GVCSWQW+YPYHY+PFASDLK+L +++I F
Sbjct: 551 VTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKF 610
Query: 432 FLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQG 491
LG PFKPF+QL+G PAASS ALPE+YR LMTDP+SPI++FYP+DFE+DMNGKRF WQG
Sbjct: 611 ELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQG 670
Query: 492 VAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQL 551
+AKLPFIDER+LL +E++LTDEEK RNS M D+L+ +H L+ +FS QL
Sbjct: 671 IAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQL 730
Query: 552 PPHARTCW--VIDTNASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQ 611
R + I S GMNGYL C V SP+ G+ DI NQV+ Y P
Sbjct: 731 SARERVDFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPD 790
Query: 612 KHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDNSSRRSH---------------GRER 671
H+HI PP G I PKK + D+KP P LWHEDN R H GR+
Sbjct: 791 AHEHITRPPPGVIFPKKTVDIGDLKPPPALWHEDNGRRPMHNNHGMHNNHGMHNNQGRQN 850
Query: 672 PRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPG----PPMFSRP--- 673
P PG+++G LG AAHRLV N+L + ++ ++ P PG PP + P
Sbjct: 851 P--PGSVSGRHLGNAAHRLVSNSLQMGTDR-----YQTPTDVPAPGYGYNPPQYVPPIPY 910
BLAST of MELO3C004356 vs. TAIR 10
Match:
AT5G42540.1 (exoribonuclease 2 )
HSP 1 Score: 570.5 bits (1469), Expect = 2.1e-162
Identity = 302/667 (45.28%), Postives = 405/667 (60.72%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
+KVILSD+NVPGEGEHKIM YIR +N PG++PNT HCLYGLDADLIMLSLATHE+HFSI
Sbjct: 193 IKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSI 252
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRG--KSDGPEDWNGADETPIHKKKYQFLNIWVL 131
LREV+ PG++ KC+ CG+ GH AA+C G K E + + + KK Y+F+NIW+L
Sbjct: 253 LREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWIL 312
Query: 132 REYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRK 191
REYL++++ IP + N +R++DDF+F+CFFVGNDFLPHMPTLEIREGAI LLM +Y+
Sbjct: 313 REYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKN 372
Query: 192 EFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQ--------------- 251
+F + YLTD+ ++ L VE FI+AV ++E+QIFQKRA++QQ Q
Sbjct: 373 KFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSERFRRDKARDKARD 432
Query: 252 ------------------------------------------------------------ 311
Sbjct: 433 NARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAE 492
Query: 312 --ENNEEMRGRAR-----RESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPA-NIAEI 371
+N E+++ + + + G DK+KL + G++ERYY EKF A + +I
Sbjct: 493 ELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQI 552
Query: 372 RQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPF 431
R+DVVLKY EGLCW+ YYY GVCSW W+YPYHY+PFASDLK L L+I F LG PFKPF
Sbjct: 553 RRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPF 612
Query: 432 DQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDE 491
+QL+ LP+AS+ ALPE YR+LMT+P SPI +FYP+DFEIDMNGKR+ WQG++KLPF++E
Sbjct: 613 NQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEE 672
Query: 492 RKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWV 551
++LL ++E SLT+EE RNS + D+L+ +HPL I S + L R +
Sbjct: 673 KRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATII 732
Query: 552 --IDTNASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQ--KHKHIPE 586
ID S GMNGY+ C + + S + G+ D+ NQV+ Y P+ + I
Sbjct: 733 EKIDPGLSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITH 792
BLAST of MELO3C004356 vs. TAIR 10
Match:
AT5G42540.2 (exoribonuclease 2 )
HSP 1 Score: 562.4 bits (1448), Expect = 5.8e-160
Identity = 302/678 (44.54%), Postives = 405/678 (59.73%), Query Frame = 0
Query: 12 LKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSI 71
+KVILSD+NVPGEGEHKIM YIR +N PG++PNT HCLYGLDADLIMLSLATHE+HFSI
Sbjct: 193 IKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSI 252
Query: 72 LREVIMLPGQQEKCYNCGKVGHLAAECRG--KSDGPEDWNGADETPIHKKKYQFLNIWVL 131
LREV+ PG++ KC+ CG+ GH AA+C G K E + + + KK Y+F+NIW+L
Sbjct: 253 LREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWIL 312
Query: 132 REYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRK 191
REYL++++ IP + N +R++DDF+F+CFFVGNDFLPHMPTLEIREGAI LLM +Y+
Sbjct: 313 REYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKN 372
Query: 192 EFPAIGGYLTDAGEVLLDKVEHFIQAVAVHEDQIFQKRARIQQAQ--------------- 251
+F + YLTD+ ++ L VE FI+AV ++E+QIFQKRA++QQ Q
Sbjct: 373 KFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSERFRRDKARDKARD 432
Query: 252 ------------------------------------------------------------ 311
Sbjct: 433 NARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAE 492
Query: 312 --ENNEEMRGRAR-----RESGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPA-NIAEI 371
+N E+++ + + + G DK+KL + G++ERYY EKF A + +I
Sbjct: 493 ELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQI 552
Query: 372 RQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPF 431
R+DVVLKY EGLCW+ YYY GVCSW W+YPYHY+PFASDLK L L+I F LG PFKPF
Sbjct: 553 RRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPF 612
Query: 432 DQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDE 491
+QL+ LP+AS+ ALPE YR+LMT+P SPI +FYP+DFEIDMNGKR+ WQG++KLPF++E
Sbjct: 613 NQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEE 672
Query: 492 RKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWV 551
++LL ++E SLT+EE RNS + D+L+ +HPL I S + L R +
Sbjct: 673 KRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATII 732
Query: 552 --IDTN-----------ASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLN 586
ID S GMNGY+ C + + S + G+ D+ NQV+ Y
Sbjct: 733 EKIDPGLSEHIQKFLDVCSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVICAIYKL 792
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008455748.1 | 0.0e+00 | 99.74 | PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 4 [Cucumis melo] >KAA00636... | [more] |
XP_011648773.1 | 0.0e+00 | 97.70 | 5'-3' exoribonuclease 4 isoform X2 [Cucumis sativus] | [more] |
XP_011648772.1 | 0.0e+00 | 97.42 | 5'-3' exoribonuclease 4 isoform X1 [Cucumis sativus] >KAE8651565.1 hypothetical ... | [more] |
ADN33909.1 | 0.0e+00 | 95.99 | 5'-3' exoribonuclease [Cucumis melo subsp. melo] | [more] |
XP_038891197.1 | 0.0e+00 | 93.24 | 5'-3' exoribonuclease 4 isoform X3 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9FQ04 | 1.2e-282 | 63.65 | 5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1 | [more] |
Q9FQ03 | 1.8e-190 | 48.16 | 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=XRN3 PE=1 SV=1 | [more] |
Q9FQ02 | 3.0e-161 | 45.28 | 5'-3' exoribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=XRN2 PE=1 SV=1 | [more] |
Q5ZIP4 | 8.2e-119 | 39.33 | 5'-3' exoribonuclease 2 OS=Gallus gallus OX=9031 GN=XRN2 PE=2 SV=1 | [more] |
Q9DBR1 | 2.9e-116 | 41.52 | 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V8W9 | 0.0e+00 | 99.74 | 5'-3' exoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... | [more] |
A0A1S3C1K3 | 0.0e+00 | 99.74 | 5'-3' exoribonuclease OS=Cucumis melo OX=3656 GN=LOC103495846 PE=3 SV=1 | [more] |
E5GBR7 | 0.0e+00 | 95.99 | 5'-3' exoribonuclease OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1 | [more] |
A0A6J1KEW9 | 0.0e+00 | 89.69 | 5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493680 PE=3 SV=1 | [more] |
A0A6J1G444 | 0.0e+00 | 89.23 | 5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1 | [more] |