MELO3C004224.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C004224.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	protein RALF-like 33
Location	chr05: 25839845 .. 25840734 (-)
RNA-Seq Expression	MELO3C004224.jh1
Synteny	MELO3C004224.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGCAAGAGACGAAGCACACCCCCACCGACGATTCGCCGGAGCAACACCGCCGGAGCTGAAGAAACTGTCAATTCCGAGTAGAAGACACTGAGAAACGAAGACAGAGAAAGTACGACCTTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTCCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCGCCGTCCACGCCGGTATTGGGATCCAAAACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTTGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACAACGTGCCGTGCTCGAGACGTGGTGCGTCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCGTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTTTGTTTAATAATCTCTCTCTCCTTTTCAATGTTCATTGATCCTCCCCCTCCCCCTTTCTTTATCTTTTCTTTGATATGGCTTTGATTGTTATACAAATTGAAAAAGGGGACATTGATCATATAGCGTCGTTCTTGTTGTTGTAAGTGTTGAAAATTGTTGTGTGTTAATTAATTATATATCTCTGCTCAATAATTTGGTAGTTCTTTAGTGGCTTGAATGTTCATCCTTCTTTCTTTTCCTTTTTCCATTGAAGGGAAAAAGATGAATCTGCAAAGAAAATGAGGAAGAAGAAAAATTGTAATTAGTTGAAATTAGGGAGAATCGTGAAATCCCATCATGAGGATGAATTGATTGTTATTTTGAGTATTGTTCTCA

mRNA sequence

AGAGCAAGAGACGAAGCACACCCCCACCGACGATTCGCCGGAGCAACACCGCCGGAGCTGAAGAAACTGTCAATTCCGAGTAGAAGACACTGAGAAACGAAGACAGAGAAAGTACGACCTTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTCCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCGCCGTCCACGCCGGTATTGGGATCCAAAACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTTGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACAACGTGCCGTGCTCGAGACGTGGTGCGTCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCGTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTTTGTTTAATAATCTCTCTCTCCTTTTCAATGTTCATTGATCCTCCCCCTCCCCCTTTCTTTATCTTTTCTTTGATATGGCTTTGATTGTTATACAAATTGAAAAAGGGGACATTGATCATATAGCGTCGTTCTTGTTGTTGTAAGTGTTGAAAATTGTTGTGTGTTAATTAATTATATATCTCTGCTCAATAATTTGGTAGTTCTTTAGTGGCTTGAATGTTCATCCTTCTTTCTTTTCCTTTTTCCATTGAAGGGAAAAAGATGAATCTGCAAAGAAAATGAGGAAGAAGAAAAATTGTAATTAGTTGAAATTAGGGAGAATCGTGAAATCCCATCATGAGGATGAATTGATTGTTATTTTGAGTATTGTTCTCA

Coding sequence (CDS)

ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTCCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCGCCGTCCACGCCGGTATTGGGATCCAAAACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTTGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACAACGTGCCGTGCTCGAGACGTGGTGCGTCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCGTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGA

Protein sequence

MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS

Homology

[Close]

BLAST of MELO3C004224.jh1 vs. NCBI nr
Match: KAA0048028.1 (Rapid ALkalinization Factor [Cucumis melo var. makuwa] >TYK13791.1 Rapid ALkalinization Factor [Cucumis melo var. makuwa])

HSP 1 Score: 250 bits (638), Expect = 9.92e-84
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 238 bits (607), Expect = 5.32e-79
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLI AAVF+IFSCSSTAVHAG+GI +SLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFVIFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. NCBI nr
Match: KGN60987.2 (hypothetical protein Csa_021272 [Cucumis sativus])

HSP 1 Score: 237 bits (605), Expect = 1.01e-78
Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLI AAVFLIFSCSST VHAG+GIQ+SLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 118
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 118

[Close]

BLAST of MELO3C004224.jh1 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 230 bits (587), Expect = 5.98e-76
Identity = 109/121 (90.08%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLI AAVF++FSCSSTAVH G+GIQ+SL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (582), Expect = 3.46e-75
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLI AAVF++FSCSSTAVH G+GI +SL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-31
Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 31  AGIGIQNSLAWIPNQSTCKGSIAEC---FGGEEFEFDSEINRRILATSQYISYGALRRNN 90
           A +  Q+S  ++P +S C G+IAEC      EEFE DSEINRRILAT++YISYGALRRN 
Sbjct: 23  AAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNT 82

Query: 91  VPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           VPCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 83  VPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.5e-31
Identity = 72/116 (62.07%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 10  TFFLISAAVFLIFSCSSTAVHAGIGIQ-NSLAWI---PNQSTCKGSIAECFGGEEFEFDS 69
           T FL +  + ++F  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 122
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGC+ I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29
Identity = 66/95 (69.47%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 31  AGIGIQNSLAWI-PNQS--TCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRN 90
           A  G   +  W+ P +S   CKGSI EC    EEFE DSE NRRILAT +YISYGAL++N
Sbjct: 21  AAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRILATKKYISYGALQKN 80

Query: 91  NVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 122
           +VPCSRRGASYYNC+PGAQANPYSRGC+AITRCRS
Sbjct: 81  SVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-28
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 102
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           N +PCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 46  STCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGA 105
           S C GSIAEC    EE EFDS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYSRGCNAITRCR 121
           QANPYSRGC+ ITRCR
Sbjct: 103 QANPYSRGCSTITRCR 118

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TYI2 (Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00530 PE=3 SV=1)

HSP 1 Score: 250 bits (638), Expect = 4.80e-84
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.33e-81
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLI AAVFLIFSCSST VHAG+GIQ+SLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1)

HSP 1 Score: 230 bits (587), Expect = 2.90e-76
Identity = 109/121 (90.08%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLI AAVF++FSCSSTAVH G+GIQ+SL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1)

HSP 1 Score: 228 bits (582), Expect = 1.68e-75
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLI AAVF++FSCSSTAVH G+GI +SL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DA82 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.50e-71
Identity = 104/121 (85.95%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGF+SPTF LI AAVF++F+CSSTAVH G+GI +SLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFHSPTF-LICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120

[Close]

BLAST of MELO3C004224.jh1 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 134.8 bits (338), Expect = 4.6e-32
Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 31  AGIGIQNSLAWIPNQSTCKGSIAEC---FGGEEFEFDSEINRRILATSQYISYGALRRNN 90
           A +  Q+S  ++P +S C G+IAEC      EEFE DSEINRRILAT++YISYGALRRN 
Sbjct: 23  AAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNT 82

Query: 91  VPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           VPCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 83  VPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MELO3C004224.jh1 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 134.4 bits (337), Expect = 6.0e-32
Identity = 72/116 (62.07%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 10  TFFLISAAVFLIFSCSSTAVHAGIGIQ-NSLAWI---PNQSTCKGSIAECFGGEEFEFDS 69
           T FL +  + ++F  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 122
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGC+ I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MELO3C004224.jh1 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-29
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 102
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           N +PCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of MELO3C004224.jh1 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 46  STCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGA 105
           S C GSIAEC    EE EFDS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYSRGCNAITRCR 121
           QANPYSRGC+ ITRCR
Sbjct: 103 QANPYSRGCSTITRCR 118

[Close]

BLAST of MELO3C004224.jh1 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 84.7 bits (208), Expect = 5.5e-17
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 41  WIPNQSTCKGSIAECFG--GE-EFEFDSEINRRILATSQ-YISYGALRRNNVPCSRRGAS 100
           W   +S   G    C G  GE ++  DSE NRR LA  + YISYGALR+NNVPCSRRG S
Sbjct: 25  WTLTKSCVNGQ--GCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRS 84

Query: 101 YYNCQPGAQANPYSRGCNAITRC 120
           YY+C+   +ANPY RGC+ IT C
Sbjct: 85  YYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of MELO3C004224.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048028.1	9.92e-84	100.00	Rapid ALkalinization Factor [Cucumis melo var. makuwa] >TYK13791.1 Rapid ALkalin...	[more]
XP_038889183.1	5.32e-79	94.21	protein RALF-like 33 [Benincasa hispida]	[more]
KGN60987.2	1.01e-78	96.61	hypothetical protein Csa_021272 [Cucumis sativus]	[more]
XP_022937540.1	5.98e-76	90.08	protein RALF-like 33 [Cucurbita moschata]	[more]
XP_022966015.1	3.46e-75	89.26	protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cu...	[more]

BLAST of MELO3C004224.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	6.5e-31	70.97	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	8.5e-31	62.07	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q945T0	1.2e-29	69.47	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	1.8e-28	66.32	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	1.5e-27	77.63	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of MELO3C004224.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYI2	4.80e-84	100.00	Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LFW9	1.33e-81	96.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1	[more]
A0A6J1FH12	2.90e-76	90.08	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1	[more]
A0A6J1HQE4	1.68e-75	89.26	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1	[more]
A0A6J1DA82	1.50e-71	85.95	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1	[more]

BLAST of MELO3C004224.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	4.6e-32	70.97	ralf-like 33	[more]
AT1G02900.1	6.0e-32	62.07	rapid alkalinization factor 1	[more]
AT3G16570.1	1.3e-29	66.32	rapid alkalinization factor 23	[more]
AT3G05490.1	1.1e-28	77.63	ralf-like 22	[more]
AT2G33775.1	5.5e-17	55.42	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 59..120 e-value: 5.3E-30 score: 104.2
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 6..121
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 6..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004224.jh1.t1	MELO3C004224.jh1.t1	mRNA