Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTCTGCTTTTGTCAGAATTCCAAACATTAGCTCCCCAAGTAACAATGGCTTTCTCATATTCTTCACAACTGCAAACCCTCTTCCTCATTCTCCTCGTTGTTCACCCAGCTTTGGGTAACCCGGAAACACAGCAGTGGATCGATCGAATATGCTATCAAAATGAGGATTATGGGTTTTGCAACAAAACCTCCAATGAAAATCTGAAAGGTCCAGCAGATGACGTTGGCTTGGTCTTGATAGCAAATAACCAAGTGCTGAGAAACACTTCCAGAACTTATCAGTTCATTGTTGAACTTCAAGCCAGCACTGACGATCCAGTAACGAAAACTGCTCTCGAGGCCTGCAGAATCGGTTGAAGCCAGGTCAGGCAGGCATTCGTGCAGGCAATTTATTGCTTCAATCAGAAAGACTATGCCGATATGGTCAAGGCTGAATGAGCAGCACCAAGAGGAGAGGCTTCCTGTAGACCACCAACACCAGATAGCCCATTGGTCAAGAGGAAGAGGGAATTGAGAATCCTCATTGCAATGGCTGCGGTCGCGGGTCATGTTCTCCCCACTTGATCTATTTGCTCATCCCTGCCAGACTTGAGTGCATACAGCCTCTTACACAACTATGTTATAGTGTAATGTACGTAGATAGGAAGACAATTGTATGGTAGTATTAAGGGGTATAGGGGTAGTTTGGTAGGAAGTTAGTTATGGAGTCTTGTTATAAAGATAGGGTGAGTTAGAGAAGGTAGGCAACTTTTTAGTGATCAAGAGCTTGAGTTAGTGTGCTCGAGGGTGGTTTATCTTGTATTTCTTTGTAGATATATTTCAACGATGAACATCATGAAGTTGATGCTTTCATTCATCTAAATAGGTCGAAGTAAAATGTAAATACTTTGGCTGCTTAAATTAACCATATCCCAAAAGCTTATAACATTGCTCTGTCATTTAACTGGATCCACATCTGTATACAATTGACAAAAAATGGGTATAAAATTAACCCTGACTTCCTGATGAACAATGAAAAGAAACATTCTTTTTCCACCAAATCTCACGTGATTCACTAGGAACGGAGTACATTTAGCATTAAGGATGGTAAATTATCAAGTATTTTGCACAATAATATCATGAGCCTCCTTTTCTTGAATTTAATACTGACAAAATGAAGGATATCCTAAGCTCATCGGCCAAGCAAAGCAACACGTTCTTTTTGCACTGCCTGCGCTAGGTTGA
mRNA sequence
TTATTCTGCTTTTGTCAGAATTCCAAACATTAGCTCCCCAAGTAACAATGGCTTTCTCATATTCTTCACAACTGCAAACCCTCTTCCTCATTCTCCTCGTTGTTCACCCAGCTTTGGGTAACCCGGAAACACAGCAGTGGATCGATCGAATATGCTATCAAAATGAGGATTATGGGTTTTGCAACAAAACCTCCAATGAAAATCTGAAAGGTCCAGCAGATGACGTTGGCTTGGTCTTGATAGCAAATAACCAAGTGCTGAGAAACACTTCCAGAACTTATCAGTTCATTGTTGAACTTCAAGCCAGCACTGACGATCCAGTAACGAAAACTGCTCTCGAGGCCTGCAGAATCGCACCAAGAGGAGAGGCTTCCTGTAGACCACCAACACCAGATAGCCCATTGGTCAAGAGGAAGAGGGAATTGAGAATCCTCATTGCAATGGCTGCGGTCGCGGGATATCCTAAGCTCATCGGCCAAGCAAAGCAACACGTTCTTTTTGCACTGCCTGCGCTAGGTTGA
Coding sequence (CDS)
ATGGCTTTCTCATATTCTTCACAACTGCAAACCCTCTTCCTCATTCTCCTCGTTGTTCACCCAGCTTTGGGTAACCCGGAAACACAGCAGTGGATCGATCGAATATGCTATCAAAATGAGGATTATGGGTTTTGCAACAAAACCTCCAATGAAAATCTGAAAGGTCCAGCAGATGACGTTGGCTTGGTCTTGATAGCAAATAACCAAGTGCTGAGAAACACTTCCAGAACTTATCAGTTCATTGTTGAACTTCAAGCCAGCACTGACGATCCAGTAACGAAAACTGCTCTCGAGGCCTGCAGAATCGCACCAAGAGGAGAGGCTTCCTGTAGACCACCAACACCAGATAGCCCATTGGTCAAGAGGAAGAGGGAATTGAGAATCCTCATTGCAATGGCTGCGGTCGCGGGATATCCTAAGCTCATCGGCCAAGCAAAGCAACACGTTCTTTTTGCACTGCCTGCGCTAGGTTGA
Protein sequence
MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDVGLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLVKRKRELRILIAMAAVAGYPKLIGQAKQHVLFALPALG
Homology
BLAST of MELO3C004164.jh1 vs. NCBI nr
Match:
XP_008453250.2 (PREDICTED: uncharacterized protein LOC103494023 [Cucumis melo])
HSP 1 Score: 273 bits (699), Expect = 4.35e-92
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV 60
MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV
Sbjct: 1 MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV 60
Query: 61 GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLV 120
GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLV
Sbjct: 61 GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLV 120
Query: 121 KRKRELRILIAMAAVAGY 138
KRKRELRILIAMAAVAG+
Sbjct: 121 KRKRELRILIAMAAVAGH 138
BLAST of MELO3C004164.jh1 vs. NCBI nr
Match:
XP_038889172.1 (uncharacterized protein LOC120079054 [Benincasa hispida])
HSP 1 Score: 200 bits (508), Expect = 1.52e-62
Identity = 109/169 (64.50%), Postives = 123/169 (72.78%), Query Frame = 0
Query: 1 MAFS-YSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADD 60
MAFS YSSQL TLFLIL++++PALG+P TQQ IDRIC QNEDYGFCN+T NENL+ PAD
Sbjct: 1 MAFSAYSSQLLTLFLILVIIYPALGDPATQQRIDRICRQNEDYGFCNRTFNENLRVPADY 60
Query: 61 VGLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRI----------------- 120
+ L LIAN+QVLRNTS TYQFIVELQASTDDP T+ ALE CRI
Sbjct: 61 IALTLIANDQVLRNTSNTYQFIVELQASTDDPATRAALETCRIGCSQVRQAFVQAISYFN 120
Query: 121 -------------APRGEASCRPPTPDSPLVKRKRELRILIAMAAVAGY 138
APRGEA CRPPTP+SPL++RKRELRILIAMA VAG+
Sbjct: 121 QKDYGNMVEVERAAPRGEAFCRPPTPESPLIERKRELRILIAMAVVAGH 169
BLAST of MELO3C004164.jh1 vs. NCBI nr
Match:
XP_022156390.1 (uncharacterized protein LOC111023296 [Momordica charantia])
HSP 1 Score: 176 bits (446), Expect = 4.14e-53
Identity = 100/164 (60.98%), Postives = 110/164 (67.07%), Query Frame = 0
Query: 6 SSQLQTLFLILLVV-HPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDVGLVL 65
S+QL LFL L+VV PA +P TQQ IDRIC Q EDYGFCN+T NENL+GPADDVGL L
Sbjct: 7 STQLLALFLTLVVVVRPASSDPATQQRIDRICRQMEDYGFCNRTFNENLRGPADDVGLTL 66
Query: 66 IANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRI---------------------- 125
IANNQ LRN S TYQF+V+LQAS D T+ ALE CRI
Sbjct: 67 IANNQALRNASNTYQFVVQLQASEVDLATRAALENCRIGCNVVKQAFLQASFHFNQRDYA 126
Query: 126 --------APRGEASCRPPTPDSPLVKRKRELRILIAMAAVAGY 138
APRGEA CRPPTPDSPLV+RKRELRILIAMA VAG+
Sbjct: 127 NMVEVEKAAPRGEALCRPPTPDSPLVERKRELRILIAMAVVAGH 170
BLAST of MELO3C004164.jh1 vs. NCBI nr
Match:
KAG7021031.1 (hypothetical protein SDJN02_17719, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 167 bits (422), Expect = 1.94e-49
Identity = 97/172 (56.40%), Postives = 110/172 (63.95%), Query Frame = 0
Query: 1 MAFSY-SSQLQTLFLILLV---VHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGP 60
MAFS SSQ LF + V VHP LG+P TQQ IDR+C Q EDYGFCN+T +ENL+GP
Sbjct: 1 MAFSACSSQRLALFFVFFVFFIVHPVLGDPATQQRIDRVCRQMEDYGFCNRTFSENLRGP 60
Query: 61 ADDVGLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRI-------------- 120
DDVGL LIAN+QVLRN S TY+FI +LQA T DP T+ ALE CRI
Sbjct: 61 VDDVGLTLIANDQVLRNASNTYEFIEQLQARTSDPATRAALENCRIGCSQVREAFEQASY 120
Query: 121 ----------------APRGEASCRPPTPDSPLVKRKRELRILIAMAAVAGY 138
APRGEA CRPPT S LV+RKRELRILIAM+ VAG+
Sbjct: 121 YFNKIDYASMVEVERDAPRGEAFCRPPTTASRLVERKRELRILIAMSVVAGH 172
BLAST of MELO3C004164.jh1 vs. NCBI nr
Match:
KAG6586205.1 (hypothetical protein SDJN03_18938, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 167 bits (422), Expect = 1.94e-49
Identity = 97/172 (56.40%), Postives = 110/172 (63.95%), Query Frame = 0
Query: 1 MAFSY-SSQLQTLFLILLV---VHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGP 60
MAFS SSQ LF + V VHP LG+P TQQ IDR+C Q EDYGFCN+T +ENL+GP
Sbjct: 1 MAFSACSSQRLALFFVFFVFFIVHPVLGDPATQQRIDRVCRQMEDYGFCNRTFSENLRGP 60
Query: 61 ADDVGLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRI-------------- 120
DDVGL LIAN+QVLRN S TY+FI +LQA T DP T+ ALE CRI
Sbjct: 61 VDDVGLTLIANDQVLRNASNTYEFIEQLQARTSDPATRAALENCRIGCSQVREAFEQASY 120
Query: 121 ----------------APRGEASCRPPTPDSPLVKRKRELRILIAMAAVAGY 138
APRGEA CRPPT S LV+RKRELRILIAM+ VAG+
Sbjct: 121 YFNKRDYASMVKVERDAPRGEAFCRPPTTASRLVERKRELRILIAMSVVAGH 172
BLAST of MELO3C004164.jh1 vs. ExPASy TrEMBL
Match:
A0A1S3BWX8 (uncharacterized protein LOC103494023 OS=Cucumis melo OX=3656 GN=LOC103494023 PE=4 SV=1)
HSP 1 Score: 273 bits (699), Expect = 2.11e-92
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV 60
MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV
Sbjct: 1 MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV 60
Query: 61 GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLV 120
GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLV
Sbjct: 61 GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEASCRPPTPDSPLV 120
Query: 121 KRKRELRILIAMAAVAGY 138
KRKRELRILIAMAAVAG+
Sbjct: 121 KRKRELRILIAMAAVAGH 138
BLAST of MELO3C004164.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1DQ57 (uncharacterized protein LOC111023296 OS=Momordica charantia OX=3673 GN=LOC111023296 PE=4 SV=1)
HSP 1 Score: 176 bits (446), Expect = 2.00e-53
Identity = 100/164 (60.98%), Postives = 110/164 (67.07%), Query Frame = 0
Query: 6 SSQLQTLFLILLVV-HPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDVGLVL 65
S+QL LFL L+VV PA +P TQQ IDRIC Q EDYGFCN+T NENL+GPADDVGL L
Sbjct: 7 STQLLALFLTLVVVVRPASSDPATQQRIDRICRQMEDYGFCNRTFNENLRGPADDVGLTL 66
Query: 66 IANNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRI---------------------- 125
IANNQ LRN S TYQF+V+LQAS D T+ ALE CRI
Sbjct: 67 IANNQALRNASNTYQFVVQLQASEVDLATRAALENCRIGCNVVKQAFLQASFHFNQRDYA 126
Query: 126 --------APRGEASCRPPTPDSPLVKRKRELRILIAMAAVAGY 138
APRGEA CRPPTPDSPLV+RKRELRILIAMA VAG+
Sbjct: 127 NMVEVEKAAPRGEALCRPPTPDSPLVERKRELRILIAMAVVAGH 170
BLAST of MELO3C004164.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1DRX6 (uncharacterized protein LOC111023283 OS=Momordica charantia OX=3673 GN=LOC111023283 PE=4 SV=1)
HSP 1 Score: 110 bits (275), Expect = 1.80e-27
Identity = 71/169 (42.01%), Postives = 92/169 (54.44%), Query Frame = 0
Query: 4 SYSSQLQT-LFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDVGL 63
S SSQL LF I L++ LG+PET++ I+R+C Q E++GFC++T +ENLKGP D V L
Sbjct: 7 SLSSQLLLGLFFIFLIMGSTLGDPETEERINRVCRQMEEFGFCSQTFHENLKGPTDYVRL 66
Query: 64 VLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEAC---------------------- 123
IA + + N +RT ++I +L A DP K L C
Sbjct: 67 TQIAKVEAIINATRTLRYITKLLAFVSDPALKNNLIVCENAYDIMNKAFLEGIKYFFQRD 126
Query: 124 --------RIAPRGEASCR-----PPTPDSPLVKRKRELRILIAMAAVA 136
RIAPR EASC PP SPLV+R RE+RILIAMA V+
Sbjct: 127 YRSMVNAERIAPRAEASCSVIFGTPPERSSPLVERNREMRILIAMALVS 175
BLAST of MELO3C004164.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1G4X2 (uncharacterized protein LOC111450843 OS=Cucurbita moschata OX=3662 GN=LOC111450843 PE=4 SV=1)
HSP 1 Score: 103 bits (256), Expect = 1.41e-24
Identity = 62/171 (36.26%), Postives = 86/171 (50.29%), Query Frame = 0
Query: 3 FSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDVGL 62
F S L L ++ +V +G+ +T+ ID +C+Q E++GFC++T +ENL GP DD+GL
Sbjct: 7 FPSSLMLLVLIVVFFIVQSVVGDSDTEDRIDNLCHQMEEFGFCSQTFHENLNGPTDDIGL 66
Query: 63 VLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEAC---------------------- 122
IA Q N S+T ++I EL + DP K L C
Sbjct: 67 TQIAIFQAQANASKTLRYIQELLPTITDPALKNGLIVCENAYKTVNEALQEGIELFFKKD 126
Query: 123 --------RIAPRGEASCR-----PPTPDSPLVKRKRELRILIAMAAVAGY 138
+IAPR +ASC PP L +R RE+RILIAMA V+GY
Sbjct: 127 YRSMLNVEKIAPRAQASCNMIFSTPPEKQGLLEERNREIRILIAMAIVSGY 177
BLAST of MELO3C004164.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1IB75 (uncharacterized protein LOC111471342 OS=Cucurbita maxima OX=3661 GN=LOC111471342 PE=4 SV=1)
HSP 1 Score: 100 bits (249), Expect = 1.43e-23
Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 0
Query: 1 MAFSYSSQLQTLFLILLVVHPALGNPETQQWIDRICYQNEDYGFCNKTSNENLKGPADDV 60
M F +S+ + L ++ +V + + ET+ I+ +C+Q E++GFC++T +ENL GP DDV
Sbjct: 1 MFFVFSNDVLVLIVVFFIVQSIVADSETENRINNLCHQMEEFGFCSQTFHENLNGPTDDV 60
Query: 61 GLVLIANNQVLRNTSRTYQFIVELQASTDDPVTKTALEAC-------------------- 120
L IA Q NTS+T ++I EL + DP K L C
Sbjct: 61 ELTQIAIFQAQANTSKTLRYIQELLPTITDPALKNNLLVCENAYKTVNEALQEGIELFFK 120
Query: 121 ----------RIAPRGEASCR-----PPTPDSPLVKRKRELRILIAMAAVAGY 138
+IAPR +ASC PP L +R RE+RILIAMA V+GY
Sbjct: 121 KDYRSMLNVEKIAPRAQASCNMIFNTPPEKQGLLEERNREIRILIAMAIVSGY 173
BLAST of MELO3C004164.jh1 vs. TAIR 10
Match:
AT1G09360.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )
HSP 1 Score: 57.8 bits (138), Expect = 9.3e-09
Identity = 46/166 (27.71%), Postives = 70/166 (42.17%), Query Frame = 0
Query: 12 LFLILLVVHPALGNPE----TQQWIDRICYQNEDYGFCNKTSNENLKGPADDV-GLVLIA 71
+ L+L + P + E T+ I+ IC +NEDYGFCNK +E LK P + L +
Sbjct: 2 IVLVLYIFTPHIEGVEADGPTEALINSICIENEDYGFCNKIIHEKLKTPTATIKELTSLI 61
Query: 72 NNQVLRNTSRTYQFIVELQASTDDPVTKTALEACRIAPRGEAS----------------- 131
+ + S TY FI + P + L+ C + E +
Sbjct: 62 IYTTMAHASDTYIFIDNILRKWPGPKETSGLKTCHAVYKRETNSFLEIRFLFSKGEYELM 121
Query: 132 -------------CRP----PTPDSPLVKRKRELRILIAMAAVAGY 139
CR P PL+++KR +RILI M+AV+G+
Sbjct: 122 DEAILSTAKILEECRGDFLIPPYKEPLLEKKRVMRILITMSAVSGH 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008453250.2 | 4.35e-92 | 99.28 | PREDICTED: uncharacterized protein LOC103494023 [Cucumis melo] | [more] |
XP_038889172.1 | 1.52e-62 | 64.50 | uncharacterized protein LOC120079054 [Benincasa hispida] | [more] |
XP_022156390.1 | 4.14e-53 | 60.98 | uncharacterized protein LOC111023296 [Momordica charantia] | [more] |
KAG7021031.1 | 1.94e-49 | 56.40 | hypothetical protein SDJN02_17719, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6586205.1 | 1.94e-49 | 56.40 | hypothetical protein SDJN03_18938, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BWX8 | 2.11e-92 | 99.28 | uncharacterized protein LOC103494023 OS=Cucumis melo OX=3656 GN=LOC103494023 PE=... | [more] |
A0A6J1DQ57 | 2.00e-53 | 60.98 | uncharacterized protein LOC111023296 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DRX6 | 1.80e-27 | 42.01 | uncharacterized protein LOC111023283 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1G4X2 | 1.41e-24 | 36.26 | uncharacterized protein LOC111450843 OS=Cucurbita moschata OX=3662 GN=LOC1114508... | [more] |
A0A6J1IB75 | 1.43e-23 | 35.84 | uncharacterized protein LOC111471342 OS=Cucurbita maxima OX=3661 GN=LOC111471342... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09360.1 | 9.3e-09 | 27.71 | Plant invertase/pectin methylesterase inhibitor superfamily protein | [more] |