MELO3C004150 (gene) Melon (DHL92) v4

Overview
NameMELO3C004150
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGag-pol polyprotein
Locationchr05: 24481876 .. 24493391 (-)
RNA-Seq ExpressionMELO3C004150
SyntenyMELO3C004150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAACATATATAACATAAATAAAATATGAAACATCAATTAACATTATCTAGTATAGAGCATAAAGCATAGAACACAAATATCTGGTATTTATTATGTTGATGATCCAACATTTGATTTCCAAAGATGAATTAGTAAATTGACAATAATACTAAGGCTGCAGGAGGTCATTTTGTATTAATCGGTCATTTTGTATTAATCGGTCATTTTTGGTTTGGACCTCAAAAAATTGTAGGCCGTAGGTATGAATCTATCATCCATTATTCCATCTATCCAATTAAATCCAAATTAACCCTTCTTTTTGGGTTATTTTCTCTTCACTGGCCGCGGCGATTCCATCTTCCCTCTCGTCATTGCCGACGGCGACGGCCACTGCCTCATCATCCTCTCTTCAGCTTAGTCGTCTGCCGTTCGCTGTTCCCTTTGCTCACTCATTCTCTCTTCAGTTAGATCAGTTTGTCGAAACGTAGAACAGAGGGGTTTTCATGAGGTATAAGAACTGAGAAGGAAAACCCCCACGAAGATCCTAACCAACCCGATTTGGGTTTTCTCAATTCGGCTAAGAAACCTAGTTCCGGTAATCTCCATCTTCAGTCATGCTCAGATTTTACCTCTCCCCACTTACCGGTAAGGCCGAGGTTCTAATTTTGATATGTTCATTTTGTATTCACTTCCTTACACATTCTCTTTTTTGATTTGGATTATGCTATCAAGTGGTTTATGAAGTTAATTTGGCAGTGAGACATTTTTTTTTGGAACAGGTTTTCGGTTCTTTCTGCAATGAAGTTGAAATTGATGTGAAGTGAGTTAGATATGAATTTTAGGAGTTACATCTCAGAATTTATTGTAGAACTGACCAGCTCAATGAAGGAGACGATATGAAATACTTATTTGCCTGGAGGGTACTGTTTTTAATTTTACTGGAGAGATATGATTAAGTCGTGTAATTAACCATGCTTTTGTTACATCGTGTTGCTAGAGTTAAATCTAAAACAAAAAATGGGATTTTTGTTTCCATCTTCAATGATGCTCTTGTATCTGCCTCACTTTGTCCCAATTCACATTCTGTTTCGTCTGTTGCTGGAACTAGTGGTAATGGAAACAGGGATATTCCTAAGTTTTTCCGTTGGAAAATTGGTTCAACCTTGAAAGAATCAGCAGGTGCAGATGGGATGATTATCAAGGAAGTAGCGTCGTCCTTTAAGGAGTGGTTCAAATCTGGAAGCAAGCCTTTGTATGGTATAATCTTCCAAATCCTCCGTGGGGATAGAGATGACCAAGGAATGCCATCTGTTCCTTCCCCTGCTGATCTTGCTCTTTCTAGGCTTGGCCTTCGCCTCAATGAAGCATTTGTGTTAGATGTCCTCCGTTATGGCTCTAAGGATATTCTGTCTTGCCTCAAGTTCTTTGACTGGGCTGGACACCAGCAAGGGTTCTTCCATACACGTGCCACATTCAATGCCATCCTTAAGATCCTCTCCCAGGCCAAGCTCTTTCCCCTCATGCTTGATTTCCTTGAAAACTGTGTGCAACAGAGAATTTACCATACGGCTTGTTTTACCAATACGTTGGTTATGGGTTATGCCGCTGCTGGTAAACCCATTTTTGCTCTTCATCTGTTTGGTAAAATGCGCTTTCAAGGCCTTGATCTTGATCCTTTTTCCTACCATGTTCTTTTGAATTCTCTTGTTGAGGAAAATTGCTTTGATGCAGTGAATGTTATTATCAAGCAGATCACTTTGAGGGGATTTGTGAATGAGCTCACACATTATTTGATGCTAAAAAATTTATGCAAGCAGAATCAGTTGGATGAGGCAGAAACATTCTTGCACGACTTGGTAGATAGTGGGAAAAAACTGAGTGGGCGTATGTTGGATTTTCTTGTTGGTGCATTTTGCCAAAGTGGAAACTTTGAGCGGGCATGGAAGTTGGTAGAATGGTTTAGAGACTTAGAGATAGTATCAATGGAGTATGTGTATGGTGTGTGGACTACAGAACTTATTAGGGCTGGGAAGTTGGAGAGTGCTCTACAGTTCTTAAATAGCAGTAAGTTAGATGGACGTTACATTCCTGATGTCTTTCGTTATAATATGTTGATTCATAGACTTCTAAGAGAAAACCGGCTTCAGGAGGTGTTTGACTTGCTTACGGAGATGATGGAGCAGCATATTGTCCCTGATAAAGTCACAATGCATGCTGCCACGTGTTTCCTTTGCAAAGCTGGGATGGTGGAAGTTGCACTTGAATTATACAACTCCAACTTCGAATTTGGGATTTCCCCCAATACTATGGCATATAACTATTTGATCAATGCTTTATGTTGGGATGGAGGCACTGATGAAGCATACCGCATCTTGAAACGCTCCATACATGAGGGTTACTTTCCAGGAAAAAAAACATTTTCTATACTTGCAAGTGCTTTGTGTCGAGAGGGAAAGCTCGATAAGATGAAGGAGTTGGTTATTTTTGCCTTAGAGAGGAACTGTATGCCTAGTGATTCCACATATGACAAGTTTATAACTGCTTTATGTAGGGCTAGGAGAGTTGAAGATGGATACCTGATTCATAGTGAACTTAATAGAATAAATGTAGTAGCCACAAGGAGTACTTACGTTCTTTTGATAGATGGTTTTATCAAGTCAGGAAGGGGTGATATTGCTGCAAGACTACTAATTGAGATGCTGGAAAAGGGTCACAATCCACGTAGGAGTGAATTTAGATATGTCATTCGCTGTCTTATTGAAATGGAGAATATGGAAAAGCAATTCTTTAACTTGCTTGAGTTACAGTTATCTTGTCAAGAACCGAATACTGAGGTGTACAATAACTTCATTTATGCAGCTGCACGTGCAAAAAAGCCTGAGCTTGCAAATGAAGTATATCAGATGATGTTGAGAAATGGAATCCAACCAAATTTGAGTTCTGACATTCTTTTGCTAAGGGGGTACTTATATAGTGAGCGCATTTCTGATGCTTTGATTTTCTTAAGTAATTTGTCTCAGACAAGAACTATTGGGAGGAAAATCTCCAACGTTGTGGTTGTTGGTCTATGCAAAGCGAATAAGAGTAATCTTGCATTTGATTTTTGGAAGCACCTGAGGAATAAGGGTACAATACCTAGTATTGAATGCTACGAGGAACTGGCTAAGCATTTCTGTCAAATCGAAAGATATGATGCGGTGGTAAATCTTATAAACGATCTAGATAAAGTTGGGCGTCCACTTACATCCTTTCTTGGTAATATACTCCTATATAGTTCATTGAAGACTCAAAAGCTCTATAAAGCCTGGGTTAACTCACGAGAGGGACTAGTGGAGACTTCTCAAAGTTCTATGCTTGGCCTGCTAATTAAAGCATTTTCTGGCCATATTAGAGTAAGCCAGTCTATTAAGAACCTGGAAGAAGCGATTGCCAAGTGCTTCCCACTTGATATCTATACGTACAATCTATTATTGAGAAAGTTAAGCCCAAATGACATGGAACAAGCATTTGAATTATTTGATCGATTGTGTGAGAGAGGGTATGTACCAAATAAGTGGACTTATGATATATTGGTTCATGGTCTTTTCAAGCAAGGGAGGACGGTAGAGGCTAAGAGATTGTTGGAAATAATGCATCAAGAAGGGTTCACTCTGACAGAGTGTACTAAAGCATTTATTTAATCCGACAGTGTTCACACGGGGTCATGATCTACATAAATTTTTTCACTTTGTGCTCCTTCCTCAAAATATTATTTTATTTCGTCCAATGAAGAGTGGAAACCCTGAAGATTTTGTCCAGCAAAGCATCAGTGCATTTCTTGGCCTAATATTTTATGGAACAAGTGGTGTAGAAGATTGTTTAGTCAAAGAGATAGTGGTTTCCAATCCAACCATTTCTACAGTTTGAAATAATTCTTCTTATTTTAAATTATAATAATTTGTTGTAATTTTGAATTAGAGTCCTCATCTTAATTTTTGTAAGCTGTTTGCAAGATGAGTAACAAGTCACATGATATCAATATTATGCTTCGTCAATGCATTTGAAGGAATCCCAGAATAGTTGTATGCTGTCCAAGTGCATTCGTTATTTATTTATTTAATTTTCCAATGTTCTCGAGGAAACAAAAAACTGAAAAATAGCATGTAAAATTCTAAATAAAAAAGGAAACATAATAAGTGGGAAATTCAGAGGACTTCAAAAATCTTTGAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAGAAAATTTCTTTTAATGTTTTTATGATGAAGTAACATTTTTGTGTGTGTGTGTGGGGGTGGGGGGTGGGAATGGTGGATTGCTACTTCAAGGATCCAAATTCATTGTGTTTACTCAAAATGGTAGCAACGAATCAATTCAGTATGTTTCCTCATGGACGCCTCATTGACAGTTAGTCAGGAGACTCAGGACTACCAATTGAGCTCTCTTAGCATAGACTACGTCTACACAGTCTGTTGGTGCTCAATGGTCTTTCGTTGCGGCTGATGGCATGGTTGTTCTGGTAATCTTCTTCTTACCTTCCAGCTAATTTTAATATTCCACTGTTTTGTACTTATTTGAGTTATTGATTTCTATCATGATTTTGGTTTTGGGTGATTTGTTGGAAGATACAATTGACCACACATTCATATTTTTGTCCCAACTATCCTTTAATTCAACTTGATCATGGTTTTTGACTTACTTTCAAATTCTCGCGATCCTTTATTTTCATTAAGGACATTTTCTTCTGAAAGAGTGGGTACATCAAGGCACTTCTCTTTCATGTCATTATTCATTCATGGTTGGGTCAGTAGGCGAGTACACTTTTTTGACAAAATTGGTGGTTAAAAGTATAGTCCCCTCCCCTTTGCTTTGCTTTCCAAGTTTATTCCATTTGTTTTCTTTTAAATAATGGTTTGATGGGTAATTTATGGCTCAACCAACTCCCACTTTGGAAGTTTTTCTCTAGTTGATATGAAATGTGGAATATTGTTGTTTTTCTGTTGTTTGGGAAGTCCTCTGTGGGGAGGACATTTTGCTTTTGGTGTCCTAATCCTTCGAGGGTTTTTGTTAGGATACCTCCTAAAAAGAATTAATATATTTCATATTTCATATATTGAGAATTAATGAAGAACTATAATATTATCCAAGTTGATGGTACTTGGGACCCCTCTCTTGAGAATATTACTCAAGACCTAACTACTCAACAACTCCCCTTCTTCACTCACCAACCTCTTATTTATAACCACTACTCTTAGTAACTACCTAATTATTTAATTATCCTTATACCCCTTATTATGATATATATATTTATATTATATGTCTATTATCGTAATTGTACATGTAGTTTAGGGTTCCTTTGTTCTCTCTATATATGTAACTTTACTCTAACTCTAAATAATAAGAAATATACTTTTCTCTGACCTCTTGAGTACATGGTATCAGAGCCTATAGGGTTTTGATTTTTCAGAGCTATTAGAGTTTTGAATTTCGTAGTTGGTGGCTTCCTTCTCCATTAGGGCTTAAGTTTAGGTCATCTTTGAGTGACCGTTTGTCGACACCGCCCAGCTTAGAAGAAGCACCATCGCCGTCCGCCACATTCTATCGTCGCCGATCACCGAGAAACGCCGCGTGTGAGCTCAACATGTTGTTGAAAGATTACTTTACAGCCACCACGCGTGGAGCGTCCGTTTTGACCTTCGTCTTCTTGGCTTGTCTCGAATCCTATTTTCCGATCATTCTGTGCAATTGGGTCCATTAAAGATCATTTGGTTTTGATGGAAATTGAAGATTACGACCTCGTTCTAGGGTTGTGGCTGGTTTTGTTCCAATCTTGCAGCTGTTTGGATTGATTTGTTTTGTTTGTGGACTACAATCAGTGTGTGTCTCCAATATGACCGACATAAAGAATATGGTAGTTTCTAACGTTATTCCCTTAGCCTCTAAGATAACCGAACATAAGTTAAATGGATCTAATTATTAGGATGGGCATTGGACAATCTTGTTCTATTTGAGAAGTATCGATATGGATGTCATATGACCGAAGATGCCCGTTTATATCTTCAGATCAAAAACTCCATTGAGACTGAGATAATTGGTGGTTGATCACTGTGAGTCTGTTAAAGAATTTTTGGAATTTTTAGATTTTCTATATTCAGGTAAAGAGCAAGTTCGTAGAATGTTTGAGGTTTGTATGCAGTCTTTTCATGCTGAACAAAAAGCGGAGTCTGTTACGAACTACTCGCCTTAAGAAGATAATTGCTGAGCTTGCTTTGTTGTTACCCTTTAGTCCTGATGTTAAAGTTCAACAAGCTCAACGAGAGAAGATGGTTGTTATGATCTTTTTGAATGGACTTTTACTCGAATTTGGAATGGCAAAGGCATAGATTCTCTCTGACTTAAAGATTTCATCATTTAGACAATGCTTTCACTCGTGTCCTTCGCATTGAAAGCTCTCCGAATGGTGTATCTATTCCTCAATACAGTAGTGCTCTCATTAGCAAGAACAATAACCCCCGGGCACCTCGAGCGATGGATGACAATGTTCAGAGGAAGAATTATGATCATCGAAAACCAAATTCTACAGAGATTGTTTGTAACTATTGTCGTAAGCCAGACCATATAAAACTTGATTGTCGGAAATTGTTACATAAGAATAGTCAACATGTGATATACCTGAGGCGTCAGTTACGATTTCTGCAGATGAGTATGCTAAGTTTCAGAATTACCTAGATTCATTACAAGCATCATCTTCCTCTACTCCTGTTGCATCCACTGTTGCCCTAGGTAATATCAAGTGTCTTCTTACATCATCTACAAAATGGGTCATAGACTCTGGTGCCATAACCCATATGACAAGTAATTCTCGCCTATTTTCTAGACCATTGTCCCCTACCCCTTTTCCATCTGTCACATTGGCAGATGGCTCCACATCTTTTGTTCTTGGATTTGGCACTATTCATCTTACCCTATCATTTTCAATGTCTTTTGTGTTACATTTGCCTAACTTATCCTTTAATTTAATTTCTATTAGTCAACTTACTCATAACTTTAATTGTGTTGTCTTGTTCTTTCTTGGTTATTGCTTGTTTCAGGATCATGTGACGAAGAAGATTATTGGTAGAGGATATGAGTCGGGAGGCCTTTATCTCTTTGATCACCAAGTACCGCAAGCTGTGGTGTGTCTTGTCGTTCCTTCTCCCTTTGAAGTTCATTGTCGTTTAGGTCATCCATCTTTGTTCGTGTTGAAGAAACTTTATCCCGAATTTAGGTCTTTGTCCTCCTTAAATTGTGATTCGTGTCAATTTGCTAAATTTCATCATCTTAGTTCGAGTCCTCGTTGTTACATTTGTTGACGATCATTCTCGTCTAACTTGGTTATATTTAATGAAAAATCGTTTTGATTTATTATCTCACTTTTGTACCTTTTATGTTAGAAGTAAAAAATCAGTTTAATGTCTCTGTCAACACTGTCAAAACTTTGCGCACTGATAAATGTGTTGATTGGTGTGAATAAGTTCATGATTTCTTTGGAAGATTGTAGCAGCTTTTGGTTTTAAGTGTTTGGTTTTCGTAGCTTTATTTTTTTGTTTTCAAATTCTCCAAGCTTTTTGGCGAATACTTCAGAAATATTTTGTTCTTTCAATGTTTATATTCTTTGGCTAAACTAAATCTTTATATGGGTGTATTTGCTGTTTTATATATAATTTTCTTTTTCACTCTTTTTCAAAATTTGTATGGCTTAAGTTTCTTGTTAGAAAAGAGAAGTTATAGCAATACCAACAGATTGAAACACGCACTTGCCAGTTTGAGTCTGAAGAAGTCTTGAGTAAGGTTGAAGCTAAAGATAAAATATGCAGTGCTGTACAACATAACTCTAAATTCCTGAGAAATGGTGAACAAGAGTGTCTAAATCATCTTAATGTCCGGGAGGTACATTACGATGCAAACCAGCTGAAGGCTGCTGCAATAAGATGGTTTGTTGTGTAGTTATAACTATACCGGGAATTTTTTTGTTTCTCATCTTTGTGAAAGACATTCTGAATTTGTTTTGTTCTAGAGCTTTTTGTGATTCTTGCCTAATTAGGCATTCAACCATGTGCTTCTTGAATCTGGAATAAGCAGGAAGATTTTCTTTAAAGCGCTCCTCCCTATCACCGTCTCTCCCTCTCTCTATCTTGCTCACACACACACACACGGAAGGTGCTTTTCATTGAAGAAATAAAAAGAGATTAATCTTCAAGTGGAAGACAAAAGAAAGACAAGAGATTAATGTTTGGCTGGATGCTTTTACATATTTTTGTATTCTTTTATGAGGCTATGTTATCTATAGTTTTCATGGCAATTTTTTATTCCAATTGCTTTTGTTTGGGTCGGAGTTTAACTGGCATGGGTTTTTTTTTTTAGGAGATTGGTTCATCATGAATTCCAGCAGCTTCTTTTGGAGGTTTGTCAAGCATCTATGAAGTCTTTGGAGCATTTTTTAAGGCTATGTTTCATCAGTTGTAGGTTTTGCTGTCAAAGTATCTCCTGCCGGGTTTTTGGATTGAAAGTTTGTGTGGTGTTGTATTTCTAAGTCTTCAGTATTTTTTTCTTTTCAAATCTTTTGTTTGTAATGGTTTCTTTATTTTTAATGGCTGATTTTCTGTTTGTACTGGATTGTGGAATCTTTAGTGCTATTGTTGTTTTCTTTTATTTCCGTTTCAACTTTTGTTGTAATTTTGAGTTTTAGTCTCTGTTCATTATATCACGAGAGGTTATCTTTCCTTCAGGAAGGAAAAAAGGACAACAAAAGAAAGAAAGAACACATTGGAAATCCTACATGTCAGACAGATTGAAATTGCTCCTTCGAACATGGATTGACAATTGATGGATATGTTATTTCAGGGTTGTTTATGTATGCGTAATTGCATATAACAACTATTAATTGTATGTTTATTTTTCATGGTCAGTTTATGCTGGTATGACTGCATCTCTTGGTTATTTTGATGAGTCTAACCAGTAATTTTAATTGAAGGGATGGACATGTGAAAAGTTTCCACACAGAGCCACTCATTCATCATCAGCATAGGAACGCGTCATGAATTTGCAATAGATGTGGCTCCTGTTCAAGCAGAACTTTTTGGCTCACATGCCAAGGTGAGTAGGCCACTTTTACAAATTACTTTCCTGATGTCAGAGGTTTGTCACAATAGAGTTGTTTTCAAAGGATTGGTCTATGACTTAAACAAAAATATAAGTTTAACTTCCCCACATTATAAATAGATGATGTGTAGAAATGCCTCGTGGTAGAGTTTATTTCCCTTCGGATAGAGTCTGCCTCAGTTTCCTTGAAGGTTGCAAATACAATGTATTTGTTGTAAAATTAAGTCATTATAATGTGCAGCGTTTACAGTATTATAGTTCAACAAACCGAATTTGAGCGGTTAAGGCATATATCTTAAGAGTTAATCTCTCTGCCCTCTTGCTCAAGCAATATTTTCTTTCCAAGTTTTGGTGTCTAATCTTTTTAGAAACAGGCTCAAGAAAAGTCCACAAATGCTTTTCAATCAGCCCAAAAGAGTATCATTCAATACTATATGAAAAAAGAGATCAACCAAGGCCTAGACTAAGACCCCTAGTTAGGGAAGTATTGGGATTATTAGTATGGTTATCAGTAGTGGCATACTAGTAATTAGATAGTGAATTTGTTAGGATTTTTAGTTGTAAATTGAGGTAGTGCGTTGGGAGCAAAGGTGTGAAGTTTTTGATAGTAATTTCTAGTGAGGAATTTGGGAAAGAGTAGCTCTCTCAAAAGGATATGGTACATCGTAGTTATCACTTATATATTTCTATTCTTTGGCGTTCTTTGTGTTTACTGTTCTTGGGAGCTCTTGTTAGGTGGAAACCTATCATACTAACAAGTGCAAGTGTGGTATCAAAGAAGAATACCTTGTTGACAGTGCGGCAGTAACTTTCATGCCATAGAAGAAAAAGCTATATAGATCAATGGAGCCAAAGAACCAACCTTGAAACCTTGGTTGGGAAACTTGTTATTTATTTGCATCTTAGGCATTTAAATTCTTAAAAATTTATTGAAATTCATCTTTAAATTTTTGATGATCTACTAACCATAAGAATATGATTTATAGTCATTGTTATGTTAGTAATTCGTTAGCCAATTTTCATGCTCACCAACCATAAGAAATTGTTTAGAAAAAATTTTAAAACATAAAAAAGCTGAAGGTAAAAAAAAAAAAAAAAAAATACTCCCAAAAGTTTTCTATGATTGTAGTTACTTGCACTTATGATTGTGTAGTCAGTATCTCTACATTTTCCATCGTGTGTTCCAACTGCCGTGCTGAATAAAGATGAGGACTCAAAACTTGGCAATTTCTGTTCAAACTAAGAATGCACAATTGGAGGCTGTTGATTTGTTCATGTTGTTTCACTTTCAAGACCCCTTCCTCACATGGGATGCCTTGTGCAATGCTCTTCTGGACTATATATTATATACTCTATCCTTAAGGACTTCTATTGTCAGGTGACTATCTATCCTATCTATCAATAAATGATATTGGATTGGAGTTAAAAAAAAGGTTTCCTCCTCTATGTTGGAAGATTGTAGTAATGTTAAAATAGGAAGAGGAAAGAAGGGTAGCCTTTTCCTTACTCTCTCTCATAATTAAAAATTGTTCGCATAGTCTTGTAAGATTATATACGTAAGTTGATCAAAACACTCACGAACATTAAAAAAACGTCTCCATAGAAGCGTGGGTGAAAAGATTACTTCTTGCTTTAGAAATTCAAGCATTGAGCATGAAGTTGGAAGCTGAATGGAAACTTGCATATTCTTGCTTCTCTTATGTTTTTGAAAGTCATTCTGAATGATGTAATTAGTGGCCAATGTTTCATCATCTTTTAAAGGGGTTGACTCGAGATTTTGGAAGATAAGTATGTATTTATATTTCAAACAATCTTAAACCTAAACCTCAGTTTAAGATCTAAAAAGTTTTTATCATGTTCTATTGAAATAACTGATTGTGATCTCCTAAAATCAAATAAGATATTACACAATTATCATCTTAAAGATCAATAGTTCAATCTCACTTACATCATTTTGAAACTCAATTAGTGCCTCACATTTTGAAATAGTGAATTTTTTAGAAGGTAACCACTTGATTCTTGTCATTTCTATTATTAGATTTTAGTTTAACAATATATGCGAGTGTAGATTTAAATCTTTAATCTTTTAGTTTATTTGTTACAATGCTTTAATCAGTTATGTTTAAGTTGAGTTAGGTTAAGGTGTTATTTTCTATATTAATTATCTAGTTAATGAATGCCATTTTCTTTGACGTGTGCATTAATGTTTTGGTGCAGGTATGCATTGGAGTACGGAACAGGGAAGTTGGATACTTGATGACATATAAAAAAAAAAAAAAAAGTGTGTTTGTATTGTATCTAACAAGTTTTTAGCTTATAAAAATGTATCATAGACTTTCGACTTCATTTCTAATATCAATCTTTATTAGATACAA

mRNA sequence

GCAAACATATATAACATAAATAAAATATGAAACATCAATTAACATTATCTAGTATAGAGCATAAAGCATAGAACACAAATATCTGGTATTTATTATGTTGATGATCCAACATTTGATTTCCAAAGATGAATTAGTAAATTGACAATAATACTAAGGCTGCAGGAGGTCATTTTGTATTAATCGGTCATTTTGTATTAATCGGTCATTTTTGGTTTGGACCTCAAAAAATTGTAGGCCGTAGGTATGAATCTATCATCCATTATTCCATCTATCCAATTAAATCCAAATTAACCCTTCTTTTTGGGTTATTTTCTCTTCACTGGCCGCGGCGATTCCATCTTCCCTCTCGTCATTGCCGACGGCGACGGCCACTGCCTCATCATCCTCTCTTCAGCTTAGTCGTCTGCCGTTCGCTGTTCCCTTTGCTCACTCATTCTCTCTTCAGTTAGATCAGTTTGTCGAAACGTAGAACAGAGGGGTTTTCATGAGGTATAAGAACTGAGAAGGAAAACCCCCACGAAGATCCTAACCAACCCGATTTGGGTTTTCTCAATTCGGCTAAGAAACCTAGTTCCGGTAATCTCCATCTTCAGTCATGCTCAGATTTTACCTCTCCCCACTTACCGGTTTTCGGTTCTTTCTGCAATGAAGTTGAAATTGATGTGAAGTGAGTTAGATATGAATTTTAGGAGTTACATCTCAGAATTTATTGTAGAACTGACCAGCTCAATGAAGGAGACGATATGAAATACTTATTTGCCTGGAGGGATCCAAATTCATTGTGTTTACTCAAAATGGTAGCAACGAATCAATTCAGTATGTTTCCTCATGGACGCCTCATTGACAGTTAGTCAGGAGACTCAGGACTACCAATTGAGCTCTCTTAGCATAGACTACGTCTACACAGTCTGTTGGTGCTCAATGGTCTTTCGTTGCGGCTGATGGCATGGTTGTTCTGGATCATGTGACGAAGAAGATTATTGGTAGAGGATATGAGTCGGGAGGCCTTTATCTCTTTGATCACCAAGTACCGCAAGCTGTGGTGTGTCTTGTCGTTCCTTCTCCCTTTGAAGTTCATTGTCGTTTAGGTCATCCATCTTTGTTCGTGTTGAAGAAACTTTATCCCGAATTTAGGAGATTGGTTCATCATGAATTCCAGCAGCTTCTTTTGGAGGTTTGTCAAGCATCTATGAAGTCTTTGGAGCATTTTTTAAGGCTATGTTTCATCAGTTGTAGGTTTTGCTGTCAAAGTATCTCCTGCCGGGTTTTTGGATTGAAAGTTTGTGTGGTGTTGTATTTCTAAGTCTTCAGTATTTTTTTCTTTTCAAATCTTTTGTTTGTAATGGTTTCTTTATTTTTAATGGCTGATTTTCTGTTTGTACTGGATTGTGGAATCTTTAGTGCTATTGTTGTTTTCTTTTATTTCCGTTTCAACTTTTGTTGTAATTTTGAGTTTTAGTCTCTGTTCATTATATCACGAGAGGTTATCTTTCCTTCAGGAAGGAAAAAAGGACAACAAAAGAAAGAAAGAACACATTGGAAATCCTACATGTCAGACAGATTGAAATTGCTCCTTCGAACATGGATTGACAATTGATGGATATGTTATTTCAGGGTTGTTTATGTATGCGTAATTGCATATAACAACTATTAATTGGATGGACATGTGAAAAGTTTCCACACAGAGCCACTCATTCATCATCAGCATAGGAACGCGTCATGAATTTGCAATAGATGTGGCTCCTGTTCAAGCAGAACTTTTTGGCTCACATGCCAAGGTGAGTAGGCCACTTTTACAAATTACTTTCCTGATGTCAGAGGTTTGTCACAATAGAGTTGTTTTCAAAGGATTGGTCTATGACTTAAACAAAAATATAAGTTTAACTTCCCCACATTATAAATAGATGATGTGTAGAAATGCCTCGTGGTAGAGTTTATTTCCCTTCGGATAGAGTCTGCCTCAGTTTCCTTGAAGGTTGCAAATACAATGTATTTGTTGTAAAATTAAGTCATTATAATGTGCAGCGTTTACAGTATTATAGTTCAACAAACCGAATTTGAGCGGTTAAGGCATATATCTTAAGAGTTAATCTCTCTGCCCTCTTGCTCAAGCAATATTTTCTTTCCAAGTTTTGGTGTCTAATCTTTTTAGAAACAGGCTCAAGAAAAGTCCACAAATGCTTTTCAATCAGCCCAAAAGAGTATCATTCAATACTATATGAAAAAAGAGATCAACCAAGGCCTAGACTAAGACCCCTAGTTAGGGAAGTATTGGGATTATTAGTATGGTTATCAGTAGTGGCATACTAGTAATTAGATAGTGAATTTGTTAGGATTTTTAGTTGTAAATTGAGGTAGTGCGTTGGGAGCAAAGGTGTGAAGTTTTTGATAGTAATTTCTAGTGAGGAATTTGGGAAAGAGTAGCTCTCTCAAAAGGATATGGTACATCGTAGTTATCACTTATATATTTCTATTCTTTGGCGTTCTTTGTGTTTACTGTTCTTGGGAGCTCTTGTTAGGTGGAAACCTATCATACTAACAAGTGCAAGTGTGGTATCAAAGAAGAATACCTTGTTGACAGTGCGGCAGTAACTTTCATGCCATAGAAGAAAAAGCTATATAGATCAATGGAGCCAAAGAACCAACCTTGAAACCTTGGTTGGGAAACTTGTTATTTATTTGCATCTTAGGCATTTAAATTCTTAAAAATTTATTGAAATTCATCTTTAAATTTTTGATGATCTACTAACCATAAGAATATGATTTATAGTCATTGTTATGTTAGTAATTCGTTAGCCAATTTTCATGCTCACCAACCATAAGAAATTGTTTAGAAAAAATTTTAAAACATAAAAAAGCTGAAGGTAAAAAAAAAAAAAAAAAAATACTCCCAAAAGTTTTCTATGATTGTAGTTACTTGCACTTATGATTGTGTAGTCAGTATCTCTACATTTTCCATCGTGTGTTCCAACTGCCGTGCTGAATAAAGATGAGGACTCAAAACTTGGCAATTTCTGTTCAAACTAAGAATGCACAATTGGAGGCTGTTGATTTGTTCATGTTGTTTCACTTTCAAGACCCCTTCCTCACATGGGATGCCTTGTGCAATGCTCTTCTGGACTATATATTATATACTCTATCCTTAAGGACTTCTATTGTCAGGTATGCATTGGAGTACGGAACAGGGAAGTTGGATACTTGATGACATATAAAAAAAAAAAAAAAAGTGTGTTTGTATTGTATCTAACAAGTTTTTAGCTTATAAAAATGTATCATAGACTTTCGACTTCATTTCTAATATCAATCTTTATTAGATACAA

Coding sequence (CDS)

ATGGTTGTTCTGGATCATGTGACGAAGAAGATTATTGGTAGAGGATATGAGTCGGGAGGCCTTTATCTCTTTGATCACCAAGTACCGCAAGCTGTGGTGTGTCTTGTCGTTCCTTCTCCCTTTGAAGTTCATTGTCGTTTAGGTCATCCATCTTTGTTCGTGTTGAAGAAACTTTATCCCGAATTTAGGAGATTGGTTCATCATGAATTCCAGCAGCTTCTTTTGGAGGTTTGTCAAGCATCTATGAAGTCTTTGGAGCATTTTTTAAGGCTATGTTTCATCAGTTGTAGGTTTTGCTGTCAAAGTATCTCCTGCCGGGTTTTTGGATTGAAAGTTTGTGTGGTGTTGTATTTCTAA

Protein sequence

MVVLDHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRRLVHHEFQQLLLEVCQASMKSLEHFLRLCFISCRFCCQSISCRVFGLKVCVVLYF
Homology
[Close]
BLAST of MELO3C004150 vs. NCBI nr
Match: KAA0056091.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYJ96426.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 5   DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRR 64
           DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEF  
Sbjct: 257 DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFSA 316

Query: 65  LVHH 69
           + H+
Sbjct: 317 VQHN 320

[Close]
BLAST of MELO3C004150 vs. NCBI nr
Match: KAA0056657.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 

Query: 2   VVLDHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPE 61
           + +D VTKKIIGRGYESGGLYLFDHQVPQAV CLVVPSPFEVHCRLGHPSLF LKK YPE
Sbjct: 113 IPIDRVTKKIIGRGYESGGLYLFDHQVPQAVACLVVPSPFEVHCRLGHPSLFALKKFYPE 172

Query: 62  FR 64
           FR
Sbjct: 173 FR 174

[Close]
BLAST of MELO3C004150 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 7.2e-24
Identity = 56/61 (91.80%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 5   DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRR 64
           D VTKKIIGRGYESGGLYLFDHQV QAV C VVPSPFEVHCRLGHPSLFVLKKLYPEFR 
Sbjct: 406 DRVTKKIIGRGYESGGLYLFDHQVSQAVACPVVPSPFEVHCRLGHPSLFVLKKLYPEFRS 465

Query: 65  L 66
           L
Sbjct: 466 L 466

[Close]
BLAST of MELO3C004150 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 7.2e-24
Identity = 56/61 (91.80%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 5  DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRR 64
          D VTKKIIGRGYESGGLYLFDHQV QAV C VVPSPFEVHCRLGHPSLFVLKKLYPEFR 
Sbjct: 29 DRVTKKIIGRGYESGGLYLFDHQVSQAVACPVVPSPFEVHCRLGHPSLFVLKKLYPEFRS 88

Query: 65 L 66
          L
Sbjct: 89 L 89

[Close]
BLAST of MELO3C004150 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 7.2e-24
Identity = 56/61 (91.80%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 5   DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRR 64
           D VTKKIIGRGYESGGLYLFDHQV QAV C VVPSPFEVHCRLGHPSLFVLKKLYPEFR 
Sbjct: 421 DRVTKKIIGRGYESGGLYLFDHQVSQAVACPVVPSPFEVHCRLGHPSLFVLKKLYPEFRS 480

Query: 65  L 66
           L
Sbjct: 481 L 481

[Close]
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match: A0A5A7URE2 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00590 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.7e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 5   DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRR 64
           DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEF  
Sbjct: 257 DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFSA 316

Query: 65  LVHH 69
           + H+
Sbjct: 317 VQHN 320

[Close]
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match: A0A5A7UPV2 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001890 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.4e-25
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 

Query: 2   VVLDHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPE 61
           + +D VTKKIIGRGYESGGLYLFDHQVPQAV CLVVPSPFEVHCRLGHPSLF LKK YPE
Sbjct: 113 IPIDRVTKKIIGRGYESGGLYLFDHQVPQAVACLVVPSPFEVHCRLGHPSLFALKKFYPE 172

Query: 62  FR 64
           FR
Sbjct: 173 FR 174

[Close]
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match: A0A5A7SR90 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00970 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.6e-24
Identity = 56/62 (90.32%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 2   VVLDHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPE 61
           V LD V KKIIGRGYESGGLYLFDHQV QAV C VVPSPFEVHCRLGHPSLFVLKKLYPE
Sbjct: 299 VTLDRVMKKIIGRGYESGGLYLFDHQVSQAVACHVVPSPFEVHCRLGHPSLFVLKKLYPE 358

Query: 62  FR 64
           FR
Sbjct: 359 FR 360

[Close]
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match: A0A5A7T102 (Putative Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00060 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 53/59 (89.83%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 5   DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFR 64
           D  TKKIIGRGYESGGLYLFDHQVPQAV CLVVPSPFEVHC LGHPSLFVLKKLYP+ R
Sbjct: 231 DRATKKIIGRGYESGGLYLFDHQVPQAVACLVVPSPFEVHCHLGHPSLFVLKKLYPKLR 289

[Close]
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match: A0A5D3BF36 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00210 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22
Identity = 54/61 (88.52%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 5   DHVTKKIIGRGYESGGLYLFDHQVPQAVVCLVVPSPFEVHCRLGHPSLFVLKKLYPEFRR 64
           DHVTKKIIGRGYES  LYLFDHQV Q V C VVPSPFEVHCRLGHPSLFVLKKLYPEFR 
Sbjct: 118 DHVTKKIIGRGYESEDLYLFDHQVLQVVACPVVPSPFEVHCRLGHPSLFVLKKLYPEFRS 177

Query: 65  L 66
           L
Sbjct: 178 L 178

The following BLAST results are available for this feature:
BLAST of MELO3C004150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0056091.11.2e-2692.19gag-pol polyprotein [Cucumis melo var. makuwa] >TYJ96426.1 gag-pol polyprotein [... [more]
KAA0056657.11.1e-2488.71Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa][more]
XP_031744754.17.2e-2491.80uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus][more]
XP_031744758.17.2e-2491.80uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus][more]
XP_031744753.17.2e-2491.80uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus][more]
BLAST of MELO3C004150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7URE25.7e-2792.19Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G... [more]
A0A5A7UPV25.4e-2588.71Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5A7SR904.6e-2490.32Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G... [more]
A0A5A7T1021.7e-2389.83Putative Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var.... [more]
A0A5D3BF361.1e-2288.52Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
BLAST of MELO3C004150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004150.1MELO3C004150.1mRNA