MELO3C004146 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004146
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr05: 24463051 .. 24463329 (+)
RNA-Seq Expression	MELO3C004146
Synteny	MELO3C004146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTCCCGGCTTCAGAGACAAAGAAAAGGCTTTCTACTTCCCCCTCAAGAGGTAGAACAAGTGAGAGGGTAGAAGGTGAGGACCCTAATGAATCGACTATGAAGGTGGCTATTAGCTACATTAGCGCTCAAGTTCCTTTGATTGCCCTGGCTTCGATGATCAACCCCTGGCAGGCACATTTAGGTTTTGATCTTCGGCCATCCTGGTCCTCAAGACCCAAGACAATCAATATTCTTCCTCGAGATTTTCTTGACTTTCAAAGATGCAAAAGGCCTTGA

mRNA sequence

GAAGTCCCGGCTTCAGAGACAAAGAAAAGGCTTTCTACTTCCCCCTCAAGAGGTAGAACAAGTGAGAGGGTAGAAGGTGAGGACCCTAATGAATCGACTATGAAGGTGGCTATTAGCTACATTAGCGCTCAAGTTCCTTTGATTGCCCTGGCTTCGATGATCAACCCCTGGCAGGCACATTTAGGTTTTGATCTTCGGCCATCCTGGTCCTCAAGACCCAAGACAATCAATATTCTTCCTCGAGATTTTCTTGACTTTCAAAGATGCAAAAGGCCTTGA

Coding sequence (CDS)

GAAGTCCCGGCTTCAGAGACAAAGAAAAGGCTTTCTACTTCCCCCTCAAGAGGTAGAACAAGTGAGAGGGTAGAAGGTGAGGACCCTAATGAATCGACTATGAAGGTGGCTATTAGCTACATTAGCGCTCAAGTTCCTTTGATTGCCCTGGCTTCGATGATCAACCCCTGGCAGGCACATTTAGGTTTTGATCTTCGGCCATCCTGGTCCTCAAGACCCAAGACAATCAATATTCTTCCTCGAGATTTTCTTGACTTTCAAAGATGCAAAAGGCCTTGA

Protein sequence

EVPASETKKRLSTSPSRGRTSERVEGEDPNESTMKVAISYISAQVPLIALASMINPWQAHLGFDLRPSWSSRPKTINILPRDFLDFQRCKRP

Homology

[Close]

BLAST of MELO3C004146 vs. NCBI nr
Match: KAA0032904.1 (hypothetical protein E6C27_scaffold81G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 3.1e-06
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 34 MKVAISYISAQVPLIALASMINPWQAHLGFD 65
          MKVA+SYISAQ+PLIALASMINPWQAHLG D
Sbjct: 1  MKVAVSYISAQIPLIALASMINPWQAHLGLD 31

[Close]

BLAST of MELO3C004146 vs. ExPASy TrEMBL
Match: A0A5A7SNX2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001270 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 34 MKVAISYISAQVPLIALASMINPWQAHLGFD 65
          MKVA+SYISAQ+PLIALASMINPWQAHLG D
Sbjct: 1  MKVAVSYISAQIPLIALASMINPWQAHLGLD 31

The following BLAST results are available for this feature:

BLAST of MELO3C004146 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032904.1	3.1e-06	90.32	hypothetical protein E6C27_scaffold81G001270 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C004146 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C004146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNX2	1.5e-06	90.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C004146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004146.1	MELO3C004146.1	mRNA