MELO3C004111 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004111
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	nuclear pore complex protein NUP43
Location	chr05: 24153191 .. 24159044 (-)
RNA-Seq Expression	MELO3C004111
Synteny	MELO3C004111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTTAATAATAATAAAATACCCCTAAACCTAATATGGCCGGACCGGCGTCTCAAAAAGTTAAATTCCGACATCATTCATCATTTCAATCAAGCTCCCTTAATAAACCCTAACAATGGCGATCCTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTACCCGGTTTGCCGTAATTGCCCTTTTCGACTCTGATTTTGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGGTTTCACCATCAAGAGTATCTTCACTTAAAACCTCTCAACTCCACCAGAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTCGACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATAGTGGAGGTGAGTGCCTGACTGTTTCGGAAGATGGACGGGTGAATTTGGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCACCTACTGAGTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCGATTGGTATGTGAATTTGTTTATCTTCCCTTGCATCCTCTCATATACATTTGAACATTTTGAACTAGGACTAGGATAGAGTTCTGGGAATCACCCAGCTTTCTAAAACTGGAAGTGGCTTGCATTTGGTAAATTAGAGGTTGTTGCCAGTATGAGAGCGTTGCTACATTATGATCGTAGAAAAATTAAGAAGTCATTGCTGCTTTTATTGACTGTAGAGGAAAGAGTAATTGGTTCTTCTCTAGGTGGACTAGAAATTTTATGTTATGAAATTTTGAGTTGATAGTTGAATCTTCAAAAGTATAAGGTGTCGAAGTTGACAAACACATCTGCTGAATTCCTTATGCCAATGTTGCAGGGCGTCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTTGGTAAAATCTGTTATATTTCTTTCTTATTTCTATATGATACTCAAGCAGTCATAGTTACGTTTGTTTATTTATGTTCTGCATAAGATCTTTGAGTGTTGACTTGTGATTTTTTTTAGAACTTAATATGTTATATGGTCTCTTTTCAAATATTGCAAAATGAACCAAAATATTCACAAATATGCCAAAATTTTACTATCTAGCTGCACATATAGAGTCTATCATGATCTATCAACTATAGATATTGAAATTTTGTCATATTTGTAAATATTTTTAGTAGTTTTGTCATATAAAACAATTTTCCATATTATTATTATTATTATATAGAATATTTAATTTTTTAATTTTCAATTTTTTTTAACTAAGAAACTATCTCACTAATAAATGAAAAGGAGTAGAACTCTAAGCACCTAAAGATTAATTACAACAAGATCTTGAATTGAAATTAAAAAGGATAAGTTGTGATGAAAGGACTTCTCTAGCTTTACACCAAAAGAAAATAGTAGAAAGAACCAAATTCATGAATAGATAAAAAGAGGAGGAAATATCTCCGAAAAGACGACCATTACCTTCACCCCTAAGATGACAAAAGAAATCCTGCATAAGGCTAATCACAGTGTCTTTCTCATCCATCATAGGATATCCCACAGTGTTAACATGCCCAAGTAAGACTTGCCGGATGAAGAACCTAACATTCTTGGGATCCTTTGTCCTCTAGACCTCATCGAAAACCGACTCAGAGTATGGAGACGGATCTAACAAAAGACTAAACAGGGACTTACCCATGAAACCTCTACTAGGATCAGGATTCCAAACACGGACATCTCTTCTCCTCCCTAAAAATACACCCCTCAAGCGAGGAGTTTAGCTTACCGTTGCTGTCAAATTCTTCAAACAGCCTTAAGAAATTCTCTTTCAGAAGGTCCCAGAAATTTAGGATGAATTCTGATGTAAAACCATCTGCCCCCGGGTCTTATTTTTCCCCAATTCTTGAACAGCCCTTTTAATTTCGAGTAGGGAGATTTTTGCCACAAGCTGAGAATTCTGGTTTCTAGTCACTCTAAGCCATTCAAGATTGAATGGAATTGATCTGATTCCATCACACTTGGGGTAAAGCAAGGAATAAAATCCCAGCATCAAATCTTCAATTTCTTGGAAGGATTTTGTTAAATCCTAAGCACTCTTATTTCAGAAGCCACACCTTAGACACTGTAGCATCAAAATGGAGAGCAAGATGAAAAAGCCGAGGTGAGCAATCATAATAGGGCCACAACTAAGCCAAGGGATCCTCTAGAGCAAAGTAGAGGTTCCATTACCACGACAATGCTGAGCTAGATTTGCAACCAAATCCAATAGTCTGATAAATGAAACACCAAGGAGCTTTAAAAGGACAAGATGGAATCAGTCTCGGGCAACCTCCTCCCATAAAGAATAAATCATAAACAGCATTCATAAGCTTCTGCCATGCCACTTTCCTTTGTACCAAATCTCCAAATCCATTTATGTACTGAAGCATAATTACATTGGCGAAAATTTCATATACCCATACCACCCATCAATTTTGGAAAATAGGTAATCTCCAAATTCACATTAGGTGTACTGCCATCATCACGAGAGCTTACCCAAAAACAATCTCAAGTTAATTTGTCTAGAATCTTTGATACCTTGGGAGGAGATAGAAACAAAGATGAATAATAAGTTGGCATACTAGCTAGAGTAGATTGGATAAACATATGTCTACCTTCCTATGAAATAAAAACATACTTTAAATTATGAAGCTTGGCTGGAGGCGCCCAATGACAGGTTGCCAAAATGAAACAATCTTAGAGTTACCACCCAAGGGAAGACTTAGGTAGGGCGATAGCCAGTGAACCTGTTAGCAACAACATGTTGTCTCATAATCATCAATATGGATCCCAAGCAATTCACTATTAGAGAGACTGTGTTTTTAAACCAGAGACCCTCTAACAAATATTAACAATCTCAAAAAGATGTACTGAGGTAGTTGAAAACAAAGGGTGTCATCAAATCTGCCATAATATTGCATAGACGAGCACTATGGGCCATAAGTCAACTAAGGCAATCCAAAAACACTATAAATAATAAGCATGAAAGAGGGTCACCTTAATGTACTCCACAACATGGAGCCACTTATATTTTCGTCAACCTCATTGAGCCACTTCAATTTGTAGTGTTGATGTCAATAAATATGCTTGACTTGTTAGTAATTCAATTTGTTCTTGAAGATTCCTATGAGAGATAATTTGATCATGAAATAAAGGACAAGTGTCTTCCAAACTTGAAATTGCAGGGTTCTCTGCAAAGGGTGCTGAAGGAATAGGCAAGCCGGTCAAGAGCTTTCCAGGATAGTGAGATGGTTTGGGTGGATTAGATTAATCTTTCTTGTTCAATTATCTTTGTCTGAGTGCCCCTTGAGGATTCTTGAATGGCAATAGAGGAGTTTTTCTGATCAATAAGGATTGATCATGTGGCGAGGGCCTGATAAGAAATGGTTGCAGTGAGGCATGGTAGCTAGAGACGATTATGGCTCAAGATGAGAAGAGAGAGGACGCTTCATTACATTAGATATGGGTCTCAAGTCTTGTTGCACTCCACAATCAAAGTTTTCAAACTTAATATTTCTATCCTAAAACTTTGTGAGATATATAGTTTCTTTACTCTCTTCCATTTGTGATACAATAAAAATGTTCCCATACCAAATGATGTGAAAACTCTAGTGATAACTGGGAACTCTTTGGTGACGTGAGCTAAGTCACAAACACTAAAACTCCCAACTCCATTCGAATTCGATTTCAACCCTAAGTTTAGGTTTGAAGTGGAGAGTCTTAAGATCATCAAAATCGCAAGAAAAAGATCATGTTCTTAGCCCTAGAGTTGAACACTCCACAAGACTGAATGATTAATCCTACTTGAATGTCGTTGGGCAAGTTGAAAGAAAAAGTGAAAAGGGTAAAACTCAATTCATCACATTCTATCCTCAACAGCTTAATGTCTATTGGCAAGGCTTTAGATGGTTTGCCAACAAAATCCTAAATGCCAATTGCCACATCATCAACACGACAAAAAGATTAACCTTGGCCTTTTTAATAATGTTTTAGAAAGGAAAGGATAAAATTGAAAAGAAATAAAATTGGATCGAAATTATTGAATAAAAATCTAAAGACCTTGGCAGTTCATATCAATTCAGTTTGGATAGTTGCTAAATGAGCCATCTGTCAAACTCCTCAATAGTCTTCTTGATCTTATTCTTTTAGTAGATTAATTTGGCAGAGTTATTGAGCTATTTAATAAAGTTAAATCAGACACACACACACATTGCCCGCAGACAATTTTATGCAACTGGTGTTGTCTACTTTGCTTGCGATGTTCAGATCTCCTGTTCTAATTGAAATTGTGTTGTCCCCTAACTTTGAAAATTGGTTTCTTATCTAAAGGTGTCATGACTTGTTCAATATTTCTTATTCCGCCCTTACTTCAGCTTTGATGTTAGAGTGCTTATTATTCCTCATGTTAGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGACCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACAAGTATTGAGCAAGGTATGAACTGGTGCTGTACCCCTGTTTGGTTGGCAGGTTGGGTCAACCATCGTTTATCCAACGTCATTTTGTTGGTTTATATTGTTTCTGTTTTCTAATATCTGAAAAAGTTTATTTTCTAATCCATATTCGTAAACTGGCTTAACTTTTTTTAATTATGTCACTTTTAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTGACCGTCAACATCCATCAGTAAGTAGCCCGTATACTATTTTTTGCAAAGTTGTGTTGTACTTGTGATGATAAGATTTCTAGTTCCAACTGAAACCGTGTGTTGTAACCTAACTGTGAAAATTGGCTTCTTATGTGAAAGATCTGTGAGGGTTTAGGTTGGGGTAGCGTGGCTATCTTTTGAGACTCTCTAAATATGCTATGCAGGAAGTAATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTCTCAAGATCTTGATTTTCAGAATCAGAAGTCATCGTTTTTCCTAAATTCAGGTTCCAATCCACTATATAAATTCCTTTAACAATTTAAGAAGTATCCTTAGCTTTCTATCTTCTTAGCTTTCTGTCTTCCATTGAGTGCATGCAATTTCTTAGTTTTAGGCTCATGTAAATTTGGCTGTAGCTTTGTTTGTTTACCACATAATTGGAACTCAATTTTGATATGAATTTTCTTACTGGTCAGAGACCATATTAGGGGGATATTTATGATGTTGTTTTGATTTGTATTTTATATGTATTTAACCTGTTCTCCATTCAACTCCTCAGCTTGTCGCTTTCACTTTTAATTTTTTATACCAAATAGAATAACTTTTTCTCCCAATATAATTTTACACAATGTAAAATACTTAATCTATATCGAATCTTTTTTTTATTGGGATTATTATTTGCTATTTCTGA

mRNA sequence

ATGAACTTTAATAATAATAAAATACCCCTAAACCTAATATGGCCGGACCGGCGTCTCAAAAAGTTAAATTCCGACATCATTCATCATTTCAATCAAGCTCCCTTAATAAACCCTAACAATGGCGATCCTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTACCCGGTTTGCCGTAATTGCCCTTTTCGACTCTGATTTTGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGGTTTCACCATCAAGAGTATCTTCACTTAAAACCTCTCAACTCCACCAGAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTCGACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATAGTGGAGGTGAGTGCCTGACTGTTTCGGAAGATGGACGGGTGAATTTGGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCACCTACTGAGTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCGATTGGGCGTCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGACCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACAAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTGACCGTCAACATCCATCAGAAGTAATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTCTCAAGATCTTGATTTTCAGAATCAGAAGTCATCGTTTTTCCTAAATTCAGGTTCCAATCCACTATATAAATTCCTTTAACAATTTAAGAAGTATCCTTAGCTTTCTATCTTCTTAGCTTTCTGTCTTCCATTGAGTGCATGCAATTTCTTAGTTTTAGGCTCATGTAAATTTGGCTGTAGCTTTGTTTGTTTACCACATAATTGGAACTCAATTTTGATATGAATTTTCTTACTGGTCAGAGACCATATTAGGGGGATATTTATGATGTTGTTTTGATTTGTATTTTATATGTATTTAACCTGTTCTCCATTCAACTCCTCAGCTTGTCGCTTTCACTTTTAATTTTTTATACCAAATAGAATAACTTTTTCTCCCAATATAATTTTACACAATGTAAAATACTTAATCTATATCGAATCTTTTTTTTATTGGGATTATTATTTGCTATTTCTGA

Coding sequence (CDS)

ATGGCGATCCTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTACCCGGTTTGCCGTAATTGCCCTTTTCGACTCTGATTTTGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGGTTTCACCATCAAGAGTATCTTCACTTAAAACCTCTCAACTCCACCAGAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTCGACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATAGTGGAGGTGAGTGCCTGACTGTTTCGGAAGATGGACGGGTGAATTTGGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCACCTACTGAGTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCGATTGGGCGTCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGACCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACAAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTGACCGTCAACATCCATCAGAAGTAATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTCTCAAGATCTTGA

Protein sequence

MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS

Homology

[Close]

BLAST of MELO3C004111 vs. NCBI nr
Match: XP_008452472.1 (PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo] >KAA0043096.1 nuclear pore complex protein NUP43 [Cucumis melo var. makuwa] >TYJ96393.1 nuclear pore complex protein NUP43 [Cucumis melo var. makuwa])

HSP 1 Score: 727.6 bits (1877), Expect = 5.0e-206
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP
Sbjct: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 351
           GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 350

[Close]

BLAST of MELO3C004111 vs. NCBI nr
Match: XP_004144716.1 (nuclear pore complex protein NUP43 [Cucumis sativus] >KGN61069.1 hypothetical protein Csa_021131 [Cucumis sativus])

HSP 1 Score: 705.3 bits (1819), Expect = 2.7e-199
Identity = 337/349 (96.56%), Postives = 345/349 (98.85%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDI PHSTW+SPSRVSSLKTSQLH+NPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 350
           GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MELO3C004111 vs. NCBI nr
Match: XP_038889924.1 (nuclear pore complex protein NUP43 [Benincasa hispida])

HSP 1 Score: 681.0 bits (1756), Expect = 5.4e-192
Identity = 326/350 (93.14%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI+SPQQQPQIHRFPQFKYVDGVRWL  LS F+R AVIALFDSD DSSSIEIHSLTQ P
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLSSLSTFSRLAVIALFDSDSDSSSIEIHSLTQKP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDIAPHSTW SPSRVSSLKTSQL+QNPLVFASTYTGSLHVLSVEPMEA+LDSELSVPEKM
Sbjct: 61  LDIAPHSTWTSPSRVSSLKTSQLYQNPLVFASTYTGSLHVLSVEPMEATLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMD GGECLTVSEDGRVNLVS+GESGLNY RIFDSNGLVSY AVKWASPT
Sbjct: 121 LHDRPISCVDVMDGGGECLTVSEDGRVNLVSIGESGLNYSRIFDSNGLVSYTAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFKADWASGIVH IDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHGIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 351
           GILTSIEQGK+PV+LLAEPCAINGFDIDR HPSEVICNLEWES+AILSRS
Sbjct: 301 GILTSIEQGKQPVDLLAEPCAINGFDIDRHHPSEVICNLEWESIAILSRS 350

[Close]

BLAST of MELO3C004111 vs. NCBI nr
Match: XP_022937892.1 (nuclear pore complex protein NUP43 [Cucurbita moschata])

HSP 1 Score: 677.9 bits (1748), Expect = 4.5e-191
Identity = 322/349 (92.26%), Postives = 335/349 (95.99%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSFWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 350
           GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MELO3C004111 vs. NCBI nr
Match: KAG6586038.1 (Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 676.8 bits (1745), Expect = 1.0e-190
Identity = 321/349 (91.98%), Postives = 334/349 (95.70%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSVWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGT FAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTFFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 350
           GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MELO3C004111 vs. ExPASy Swiss-Prot
Match: Q24JJ9 (Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana OX=3702 GN=NUP43 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.0e-110
Identity = 212/361 (58.73%), Postives = 249/361 (68.98%), Query Frame = 0


Query: 7   QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLD---- 66
           Q   Q+HR PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI SL  NP      
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 67  ---IAPHSTWVSPSRVSSLKTSQL-----HQNPLVFASTYTGSLHVLSVEPMEASLDSEL 126
              I   S+W SPSRVSSL+ +          P+V A+T +GSLHVL ++ +E +   E 
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEF 124

Query: 127 SVPE-KMLHDGPISCVDVMDSGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYN 186
              E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y 
Sbjct: 125 YAAEGERFHVGRVEGVDWRE-GGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYR 184

Query: 187 AVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTC 246
           AVKWASPTEFVTGG GF LQ WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC
Sbjct: 185 AVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKHTC 244

Query: 247 LAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS 306
           +AGGS GTVFAWDLR  QQPI+LSG+  ++  N    ESEVWEV YD Y KS     +SS
Sbjct: 245 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NVSS 304

Query: 307 TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILS 350
           ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ S
Sbjct: 305 SRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFS 360

[Close]

BLAST of MELO3C004111 vs. ExPASy TrEMBL
Match: A0A5D3BAS9 (Nuclear pore complex protein NUP43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00190 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 2.4e-206
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP
Sbjct: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 351
           GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 350

[Close]

BLAST of MELO3C004111 vs. ExPASy TrEMBL
Match: A0A1S3BTA6 (nuclear pore complex protein NUP43 OS=Cucumis melo OX=3656 GN=LOC103493491 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 2.4e-206
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP
Sbjct: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 351
           GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS 350

[Close]

BLAST of MELO3C004111 vs. ExPASy TrEMBL
Match: A0A0A0LJ46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036670 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.3e-199
Identity = 337/349 (96.56%), Postives = 345/349 (98.85%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDI PHSTW+SPSRVSSLKTSQLH+NPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 350
           GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MELO3C004111 vs. ExPASy TrEMBL
Match: A0A6J1FCG9 (nuclear pore complex protein NUP43 OS=Cucurbita moschata OX=3662 GN=LOC111444145 PE=4 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.2e-191
Identity = 322/349 (92.26%), Postives = 335/349 (95.99%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSFWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 350
           GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MELO3C004111 vs. ExPASy TrEMBL
Match: A0A6J1HYH3 (nuclear pore complex protein NUP43 OS=Cucurbita maxima OX=3661 GN=LOC111468634 PE=4 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.6e-189
Identity = 318/349 (91.12%), Postives = 333/349 (95.42%), Query Frame = 0


Query: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60
           MAI+SPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYIDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSAWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKI 120

Query: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMDSGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDSGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAV QFK DWASGIVHC+DIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVCQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEG+KTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVRYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 350
           GI+TSIEQGK+PVELLAEPCAINGFDID QHPSEVICNLEWESVAILSR
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MELO3C004111 vs. TAIR 10
Match: AT4G30840.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 398.7 bits (1023), Expect = 4.9e-111
Identity = 212/361 (58.73%), Postives = 249/361 (68.98%), Query Frame = 0


Query: 7   QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLD---- 66
           Q   Q+HR PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI SL  NP      
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 67  ---IAPHSTWVSPSRVSSLKTSQL-----HQNPLVFASTYTGSLHVLSVEPMEASLDSEL 126
              I   S+W SPSRVSSL+ +          P+V A+T +GSLHVL ++ +E +   E 
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEF 124

Query: 127 SVPE-KMLHDGPISCVDVMDSGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYN 186
              E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y 
Sbjct: 125 YAAEGERFHVGRVEGVDWRE-GGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYR 184

Query: 187 AVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTC 246
           AVKWASPTEFVTGG GF LQ WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC
Sbjct: 185 AVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKHTC 244

Query: 247 LAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS 306
           +AGGS GTVFAWDLR  QQPI+LSG+  ++  N    ESEVWEV YD Y KS     +SS
Sbjct: 245 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NVSS 304

Query: 307 TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILS 350
           ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ S
Sbjct: 305 SRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFS 360

The following BLAST results are available for this feature:

BLAST of MELO3C004111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452472.1	5.0e-206	100.00	PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo] >KAA0043096.1 nucle...	[more]
XP_004144716.1	2.7e-199	96.56	nuclear pore complex protein NUP43 [Cucumis sativus] >KGN61069.1 hypothetical pr...	[more]
XP_038889924.1	5.4e-192	93.14	nuclear pore complex protein NUP43 [Benincasa hispida]	[more]
XP_022937892.1	4.5e-191	92.26	nuclear pore complex protein NUP43 [Cucurbita moschata]	[more]
KAG6586038.1	1.0e-190	91.98	Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MELO3C004111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q24JJ9	7.0e-110	58.73	Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana OX=3702 GN=NUP43 PE=1...	[more]

BLAST of MELO3C004111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAS9	2.4e-206	100.00	Nuclear pore complex protein NUP43 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BTA6	2.4e-206	100.00	nuclear pore complex protein NUP43 OS=Cucumis melo OX=3656 GN=LOC103493491 PE=4 ...	[more]
A0A0A0LJ46	1.3e-199	96.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036670 PE=4 SV=1	[more]
A0A6J1FCG9	2.2e-191	92.26	nuclear pore complex protein NUP43 OS=Cucurbita moschata OX=3662 GN=LOC111444145...	[more]
A0A6J1HYH3	1.6e-189	91.12	nuclear pore complex protein NUP43 OS=Cucurbita maxima OX=3661 GN=LOC111468634 P...	[more]

BLAST of MELO3C004111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30840.1	4.9e-111	58.73	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 19..348 e-value: 1.3E-28 score: 102.2
None	No IPR available	PANTHER	PTHR22652	NUCLEOPORIN NUP43	coord: 8..349
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 48..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004111.1	MELO3C004111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding