MELO3C004055 (gene) Melon (DHL92) v4

Overview
NameMELO3C004055
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr05: 23229677 .. 23229889 (-)
RNA-Seq ExpressionMELO3C004055
SyntenyMELO3C004055
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTGGCAGCTCAATCAAAGAAAAACGGCTCGCGGCTTGGGTTGGAGGCAGAAACACGTGGCTGAAGGACGACTTGCTGCTGTTTGCTCGCGTGGCGATCGGCTCTGCAAGACGTGGCTCGGTTGGACGGAAGCTCACAAGCGACTGGAGAAAAGAAGACGACTCGCATACGTAGACGCGCGGCTCGACCAGACGTCTGACGATCGCTTG

mRNA sequence

ATGGATTGGCAGCTCAATCAAAGAAAAACGGCTCGCGGCTTGGGTTGGAGGCAGAAACACGTGGCTGAAGGACGACTTGCTGCTGTTTGCTCGCGTGGCGATCGGCTCTGCAAGACGTGGCTCGGTTGGACGGAAGCTCACAAGCGACTGGAGAAAAGAAGACGACTCGCATACGTAGACGCGCGGCTCGACCAGACGTCTGACGATCGCTTG

Coding sequence (CDS)

ATGGATTGGCAGCTCAATCAAAGAAAAACGGCTCGCGGCTTGGGTTGGAGGCAGAAACACGTGGCTGAAGGACGACTTGCTGCTGTTTGCTCGCGTGGCGATCGGCTCTGCAAGACGTGGCTCGGTTGGACGGAAGCTCACAAGCGACTGGAGAAAAGAAGACGACTCGCATACGTAGACGCGCGGCTCGACCAGACGTCTGACGATCGCTTG

Protein sequence

MDWQLNQRKTARGLGWRQKHVAEGRLAAVCSRGDRLCKTWLGWTEAHKRLEKRRRLAYVDARLDQTSDDRL
Homology
[Close]
BLAST of MELO3C004055 vs. NCBI nr
Match: KAA0032764.1 (hypothetical protein E6C27_scaffold708G00080 [Cucumis melo var. makuwa] >TYK23932.1 hypothetical protein E5676_scaffold428G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 7.9e-18
Identity = 52/75 (69.33%), Postives = 57/75 (76.00%), Query Frame = 0 

Query: 1  MDWQLNQRKTARGLGWRQKH----VAEGRLAAVCSRGDRLCKTWLGWTEAHKRLEKRRRL 60
          M W+LNQRKT  GLG RQKH    V EG LAA+ S GDRLCK WLGW EA K+LEKRRRL
Sbjct: 1  MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL 60

Query: 61 AYVDARLDQTSDDRL 72
          AYVD  LD T+D+RL
Sbjct: 61 AYVDTWLDWTADNRL 75

[Close]
BLAST of MELO3C004055 vs. ExPASy TrEMBL
Match: A0A5A7SNJ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold428G00080 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 52/75 (69.33%), Postives = 57/75 (76.00%), Query Frame = 0 

Query: 1  MDWQLNQRKTARGLGWRQKH----VAEGRLAAVCSRGDRLCKTWLGWTEAHKRLEKRRRL 60
          M W+LNQRKT  GLG RQKH    V EG LAA+ S GDRLCK WLGW EA K+LEKRRRL
Sbjct: 1  MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL 60

Query: 61 AYVDARLDQTSDDRL 72
          AYVD  LD T+D+RL
Sbjct: 61 AYVDTWLDWTADNRL 75

The following BLAST results are available for this feature:
BLAST of MELO3C004055 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032764.17.9e-1869.33hypothetical protein E6C27_scaffold708G00080 [Cucumis melo var. makuwa] >TYK2393... [more]
BLAST of MELO3C004055 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C004055 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SNJ43.8e-1869.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C004055 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004055.1MELO3C004055.1mRNA