MELO3C004027 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004027
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DNA repair protein XRCC3 homolog
Location	chr05: 22740185 .. 22741170 (+)
RNA-Seq Expression	MELO3C004027
Synteny	MELO3C004027

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAATGCACCTTCGGCTGTCCGACCATCGACCGCTCCGTCGGCGGCGGCATCGCTTGTAGCTCCCTCACTGAGATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTTCCTTTCCGACGCCTTCAACAGCTTTCCCAAGCATTTTCCTCGTCATATCCCCAATTTTCCAATCCCTCCGATCACATCTTTGTCGAACCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCATTTACCCATCAGGCTTATTGTGATCGATTCGATTGCGGCCTTGTTTCGCTCTGATTTTGACAACACCCCATCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGAGAGACGGGTTTGCCCGGCATTAGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTGGGGGAAGGTGAAGGGATGGTGAATGGAAGTGAATTAGTACAAAGAAGAAAAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAACAGAGAAGGAGTTGTGGGAGTTGAAAGCTAATGACATCTTCTTGTATATGAACTTATTGATTTTGTGTGGAAGAACTAAAGTTTGTATAATGATTTATGATTTGGTTGTGATGAATGGAAGAACTTTGAGCTTTG

mRNA sequence

ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAATGCACCTTCGGCTGTCCGACCATCGACCGCTCCGTCGGCGGCGGCATCGCTTGTAGCTCCCTCACTGAGATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTTCCTTTCCGACGCCTTCAACAGCTTTCCCAAGCATTTTCCTCGTCATATCCCCAATTTTCCAATCCCTCCGATCACATCTTTGTCGAACCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCATTTACCCATCAGGCTTATTGTGATCGATTCGATTGCGGCCTTGTTTCGCTCTGATTTTGACAACACCCCATCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGAGAGACGGGTTTGCCCGGCATTAGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTGGGGGAAGGTGAAGGGATGGTGAATGGAAGTGAATTAGTACAAAGAAGAAAAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAACAGAGAAGGAGTTGTGGGAGTTGAAAGCTAATGACATCTTCTTGTATATGAACTTATTGATTTTGTGTGGAAGAACTAAAGTTTGTATAATGATTTATGATTTGGTTGTGATGAATGGAAGAACTTTGAGCTTTG

Coding sequence (CDS)

ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAATGCACCTTCGGCTGTCCGACCATCGACCGCTCCGTCGGCGGCGGCATCGCTTGTAGCTCCCTCACTGAGATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTTCCTTTCCGACGCCTTCAACAGCTTTCCCAAGCATTTTCCTCGTCATATCCCCAATTTTCCAATCCCTCCGATCACATCTTTGTCGAACCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCATTTACCCATCAGGCTTATTGTGATCGATTCGATTGCGGCCTTGTTTCGCTCTGATTTTGACAACACCCCATCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGAGAGACGGGTTTGCCCGGCATTAGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTGGGGGAAGGTGAAGGGATGGTGAATGGAAGTGAATTAGTACAAAGAAGAAAAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAACAGAGAAGGAGTTGTGGGAGTTGAAAGCTAA

Protein sequence

MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES

Homology

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BLAST of MELO3C004027 vs. NCBI nr
Match: XP_008451720.1 (PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 586.6 bits (1511), Expect = 1.2e-163
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

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BLAST of MELO3C004027 vs. NCBI nr
Match: TYK01347.1 (DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.9 bits (1504), Expect = 7.5e-163
Identity = 291/293 (99.32%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

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BLAST of MELO3C004027 vs. NCBI nr
Match: XP_004150781.1 (DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical protein Csa_021163 [Cucumis sativus])

HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160
Identity = 287/293 (97.95%), Postives = 291/293 (99.32%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

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BLAST of MELO3C004027 vs. NCBI nr
Match: XP_038890688.1 (DNA repair protein XRCC3 homolog [Benincasa hispida])

HSP 1 Score: 547.4 bits (1409), Expect = 7.7e-152
Identity = 275/293 (93.86%), Postives = 283/293 (96.59%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRS GGG+ACSSLTEIVAESGCGKTQLCLQLSL AQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSAGGGVACSSLTEIVAESGCGKTQLCLQLSLYAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIES L+N NS LPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLKNSNSQLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSL VVLTNQVVDL+GSSDGLNALRIGNLKFL SS R+VCPALGLAWANCVN+RLFLSRN
Sbjct: 181 YSLGVVLTNQVVDLIGSSDGLNALRIGNLKFLSSSGRQVCPALGLAWANCVNTRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EE+VGEGEGM+NGSELVQRR TRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEIVGEGEGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCEYVINREGVVGVES 292

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BLAST of MELO3C004027 vs. NCBI nr
Match: KAG7020901.1 (DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-145
Identity = 264/293 (90.10%), Postives = 276/293 (94.20%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+AC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGLNA+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLNAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIES L NR+S LP RLIVIDSIAALFRSDFDNTPSDLKRRS+LFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEG+G+VN  EL QRR TRRWLHVVFAPHLPKSSCEYVINR+GVVGVES
Sbjct: 241 EEVVGEGDGVVNSGELAQRR-TRRWLHVVFAPHLPKSSCEYVINRQGVVGVES 292

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BLAST of MELO3C004027 vs. ExPASy Swiss-Prot
Match: Q9FKM5 (DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.8e-98
Identity = 184/298 (61.74%), Postives = 224/298 (75.17%), Query Frame = 0


Query: 3   PENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC  +D  + GGI+C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+  + N  +  P++LIV+DS+AALFRS+FDNTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           SR++   V    E   N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

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BLAST of MELO3C004027 vs. ExPASy Swiss-Prot
Match: Q9CXE6 (DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.1e-34
Identity = 105/302 (34.77%), Postives = 150/302 (49.67%), Query Frame = 0


Query: 7   LHLLQTT-------QKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQ 66
           LHL Q         Q+ + GCP +D+ +GGG+    +T +   S  GKTQL LQL L  Q
Sbjct: 66  LHLFQQKESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQ 125

Query: 67  LPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQ-------FSNPSDHIFVE 126
            P   GGL A ++YI TE  FP +RL QL    +   +  P+       FSN   HIF+E
Sbjct: 126 FPRQYGGLEAGAVYICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSN---HIFIE 185

Query: 127 PVHSAHQLFDIMPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFK 186
                  L + + K    L +R      RL+V+DSIAA FR +F    S +  R+ L   
Sbjct: 186 HAADVDTLLECVSKKVPILLSRGM---ARLVVVDSIAAPFRCEFHLQASAI--RAKLLLS 245

Query: 187 ISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWAN 246
           +   L+ L+  +   V+  NQV D++     ++       + L +SE R+ PALG+ WAN
Sbjct: 246 LGATLRRLSSTFRSPVLCINQVTDMVEDQQSVS-------RSLGASEERLSPALGITWAN 305

Query: 247 CVNSRLFLSRNEEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVV 292
            +  RL + R  E     + +  G      R   R L V+FAPHLP SSC Y ++ EG+ 
Sbjct: 306 QLLMRLMVDRTHE-----DDVTTGLP----RSPVRTLRVLFAPHLPLSSCCYTVSGEGIR 343

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BLAST of MELO3C004027 vs. ExPASy Swiss-Prot
Match: O43542 (DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-32
Identity = 98/285 (34.39%), Postives = 139/285 (48.77%), Query Frame = 0


Query: 14  QKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
           Q+ + GCP +D  + GG+    +TE+   S  GKTQL LQL L  Q P  +GGL A ++Y
Sbjct: 80  QRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVY 139

Query: 74  IHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLF-DIMPKIESSLENRN 133
           I TE  FP +RLQQL     +  P+         ++ +    Q+F + +  +++ LE  N
Sbjct: 140 ICTEDAFPHKRLQQL----MAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 199

Query: 134 SHLPI-------RLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKKYSLAV 193
             +P+       RL+VIDS+AA FR +FD+  S  + R      +   L+ L+  +   V
Sbjct: 200 KKVPVLLSRGMARLVVIDSVAAPFRCEFDSQASAPRARH--LQSLGATLRELSSAFQSPV 259

Query: 194 VLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVG 253
           +  NQV + M      +    G L F    + RV PALG+ WAN +  RL   R  E   
Sbjct: 260 LCINQVTEAMEEQGAAH----GPLGFW---DERVSPALGITWANQLLVRLLADRLRE--- 319

Query: 254 EGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVG 291
                    E        R L V+ APHLP SSC Y I+ EGV G
Sbjct: 320 ---------EEAALGCPARTLRVLSAPHLPPSSCSYTISAEGVRG 339

[Close]

BLAST of MELO3C004027 vs. ExPASy Swiss-Prot
Match: Q08DH8 (DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-31
Identity = 101/303 (33.33%), Postives = 143/303 (47.19%), Query Frame = 0


Query: 7   LHLL-------QTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQ 66
           LHLL       +  Q+ + GCP +D  + GG+    +TE+   S  GKTQL LQL L  Q
Sbjct: 66  LHLLRQEGPFPEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQ 125

Query: 67  LPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQFSNPSDHIFVEPVHSAHQ 126
           LP  +GGL A ++Y+ TE  FP RRLQQL    Q   +  P       H+ +  +   HQ
Sbjct: 126 LPPRHGGLGAGAVYVCTEDAFPSRRLQQLIAQQQRLRADVP------GHV-ISKIRFGHQ 185

Query: 127 LF-DIMPKIESSLENRNSHLPI-------RLIVIDSIAALFRSDFDNTPSDLKRRSSLFF 186
           +F +    +++ L+     +P+       RL+VIDS+AA FR +FD   + L  R+    
Sbjct: 186 IFIEHAADVDTLLQCVREKVPVLLARGMARLVVIDSVAAPFRCEFDG--AALALRAQRLL 245

Query: 187 KISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWA 246
            +  +L+ L+  +   V+  NQV + +   D            L +    + PALG+ WA
Sbjct: 246 ALGAELRRLSCAFRSPVLCVNQVTEAVEEQD------------LVAGPPGMSPALGITWA 305

Query: 247 NCVNSRLFLSRNEEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGV 292
           N +  RL   R               E        R L VVFAPHLP SSC Y I  EGV
Sbjct: 306 NQLLVRLLADRQR------------PEEAPLTPPGRTLRVVFAPHLPASSCSYTIAAEGV 335

[Close]

BLAST of MELO3C004027 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28
Identity = 89/283 (31.45%), Postives = 144/283 (50.88%), Query Frame = 0


Query: 23  IDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPF 82
           +D ++ GG+AC SLTEI    GCGKTQ C+ +S+ A LP + GGL  + +YI TE  F  
Sbjct: 90  LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149

Query: 83  RRLQQLSQAFSSSYPQFSNPSDHIFV--EPVHSAHQLF--DIMPKIESSLENRNSHLPIR 142
            RL ++++   S +P++ N  + + +    VH   +L   +++ +IE SLE       I+
Sbjct: 150 ERLVEIAE---SRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIE-SLEEEIISKGIK 209

Query: 143 LIVIDSIAALFRSDFD-NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV------ 202
           L+++DS+A++ R +FD     +LK R+    + +  LK LA+++S+ V+LTNQ+      
Sbjct: 210 LVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSG 269

Query: 203 -----VDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGE 262
                 DL+  +D L      +L    S    V  ALG  W++ VN+RL L   +     
Sbjct: 270 ALASQADLVSPADDL------SLSEGTSGSSCVIAALGNTWSHSVNTRLILQYLD----- 329

Query: 263 GEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVV 290
                           RR + +  +P  P +S  Y I  EG+V
Sbjct: 330 --------------SERRQILIAKSPLAPFTSFVYTIKEEGLV 343

[Close]

BLAST of MELO3C004027 vs. ExPASy TrEMBL
Match: A0A5A7UPR6 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00560 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.6e-164
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of MELO3C004027 vs. ExPASy TrEMBL
Match: A0A1S3BRJ5 (DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.6e-164
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of MELO3C004027 vs. ExPASy TrEMBL
Match: A0A5D3BPT7 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00290 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.6e-163
Identity = 291/293 (99.32%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]

BLAST of MELO3C004027 vs. ExPASy TrEMBL
Match: A0A0A0LK93 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 5.8e-161
Identity = 287/293 (97.95%), Postives = 291/293 (99.32%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of MELO3C004027 vs. ExPASy TrEMBL
Match: A0A6J1FDM2 (DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.8e-146
Identity = 264/293 (90.10%), Postives = 276/293 (94.20%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+AC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGL A+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLKAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIES L NR+S LP RLIVIDSIAALFRSDFDNTPSDLKRRS+LFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEG+G+VNG EL QRR TRRWLHVVFAPHLPKSSCEYVINR+GVVGVES
Sbjct: 241 EEVVGEGDGVVNGGELAQRR-TRRWLHVVFAPHLPKSSCEYVINRQGVVGVES 292

[Close]

BLAST of MELO3C004027 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-99
Identity = 184/298 (61.74%), Postives = 224/298 (75.17%), Query Frame = 0


Query: 3   PENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC  +D  + GGI+C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+  + N  +  P++LIV+DS+AALFRS+FDNTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           SR++   V    E   N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of MELO3C004027 vs. TAIR 10
Match: AT5G57450.2 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-99
Identity = 184/298 (61.74%), Postives = 224/298 (75.17%), Query Frame = 0


Query: 3   PENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC  +D  + GGI+C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+  + N  +  P++LIV+DS+AALFRS+FDNTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           SR++   V    E   N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of MELO3C004027 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 105.9 bits (263), Expect = 5.5e-23
Identity = 86/302 (28.48%), Postives = 143/302 (47.35%), Query Frame = 0


Query: 5   NLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++LH  ++  + T  C  +D  +GGGI+C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 94  DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q+++A      +++               P D   +IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213

Query: 125 VEPVHSAHQLFDIMPKIESSL-ENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSL 184
              V S  +   ++  +E  + EN++    ++++++DSI   FR D+D    DL +R+ +
Sbjct: 214 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDYD----DLAQRTRV 273

Query: 185 FFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLA 244
             +++ K   LAKK+SLAVVL NQV      S+G   L +               ALG +
Sbjct: 274 LSEMALKFMKLAKKFSLAVVLLNQVTTKF--SEGSFQLAL---------------ALGDS 333

Query: 245 WANCVNSRLFLSRNEEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINRE 289
           W++   +R+ L              NG E        R+ ++  +P LP +S  Y +   
Sbjct: 334 WSHSCTNRVIL------------YWNGDE--------RYAYIDKSPSLPSASASYTVTSR 350

[Close]

BLAST of MELO3C004027 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 105.9 bits (263), Expect = 5.5e-23
Identity = 86/302 (28.48%), Postives = 143/302 (47.35%), Query Frame = 0


Query: 5   NLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++LH  ++  + T  C  +D  +GGGI+C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 118 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 177

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q+++A      +++               P D   +IF
Sbjct: 178 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 237

Query: 125 VEPVHSAHQLFDIMPKIESSL-ENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSL 184
              V S  +   ++  +E  + EN++    ++++++DSI   FR D+D    DL +R+ +
Sbjct: 238 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDYD----DLAQRTRV 297

Query: 185 FFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLA 244
             +++ K   LAKK+SLAVVL NQV      S+G   L +               ALG +
Sbjct: 298 LSEMALKFMKLAKKFSLAVVLLNQVTTKF--SEGSFQLAL---------------ALGDS 357

Query: 245 WANCVNSRLFLSRNEEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINRE 289
           W++   +R+ L              NG E        R+ ++  +P LP +S  Y +   
Sbjct: 358 WSHSCTNRVIL------------YWNGDE--------RYAYIDKSPSLPSASASYTVTSR 374

[Close]

BLAST of MELO3C004027 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-17
Identity = 77/272 (28.31%), Postives = 119/272 (43.75%), Query Frame = 0


Query: 17  TFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHT 76
           T G   +D+ + GGI   S+TE+  E   GKTQLC  L +  QLP+  GG    ++YI  
Sbjct: 106 TSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDA 165

Query: 77  EFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLENRNSHLP 136
           E  F  +RL Q++  F  +        +  +    ++ HQ   ++      +E R     
Sbjct: 166 EGTFRPQRLLQIADRFGLNGADVL--ENVAYARAYNTDHQSRLLLEAASMMIETR----- 225

Query: 137 IRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMG 196
             L+++DS  AL+R+DF     +L  R     K    L+ LA ++ +AVV+TNQVV    
Sbjct: 226 FALLIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV---A 285

Query: 197 SSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGEGEGMVNGSEL 256
             DG +AL  G          +  P  G   A+   +RL L +                 
Sbjct: 286 QVDG-SALFAG---------PQFKPIGGNIMAHATTTRLALRKG---------------- 337

Query: 257 VQRRKTRRWLHVVFAPHLPKSSCEYVINREGV 289
              R   R   V+ +P LP++   + I+ EGV
Sbjct: 346 ---RAEERICKVISSPCLPEAEARFQISTEGV 337

The following BLAST results are available for this feature:

BLAST of MELO3C004027 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451720.1	1.2e-163	100.00	PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA rep...	[more]
TYK01347.1	7.5e-163	99.32	DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa]	[more]
XP_004150781.1	1.2e-160	97.95	DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical prot...	[more]
XP_038890688.1	7.7e-152	93.86	DNA repair protein XRCC3 homolog [Benincasa hispida]	[more]
KAG7020901.1	1.4e-145	90.10	DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of MELO3C004027 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM5	1.8e-98	61.74	DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 S...	[more]
Q9CXE6	3.1e-34	34.77	DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1	[more]
O43542	8.3e-32	34.39	DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1	[more]
Q08DH8	1.9e-31	33.33	DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1	[more]
O15315	1.5e-28	31.45	DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2	[more]

BLAST of MELO3C004027 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UPR6	5.6e-164	100.00	DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BRJ5	5.6e-164	100.00	DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV...	[more]
A0A5D3BPT7	3.6e-163	99.32	DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LK93	5.8e-161	97.95	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4...	[more]
A0A6J1FDM2	6.8e-146	90.10	DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 P...	[more]

BLAST of MELO3C004027 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57450.1	1.2e-99	61.74	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT5G57450.2	1.2e-99	61.74	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT2G45280.1	5.5e-23	28.48	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	5.5e-23	28.48	RAS associated with diabetes protein 51C	[more]
AT5G20850.1	5.9e-17	28.31	RAS associated with diabetes protein 51	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01874	DNAREPAIRADA	coord: 25..53 score: 41.03 coord: 143..167 score: 19.28
None	No IPR available	PANTHER	PTHR46487	DNA REPAIR PROTEIN XRCC3	coord: 1..292
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..291 e-value: 4.1E-64 score: 218.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..289
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 1..293 e-value: 7.2E-52 score: 174.3
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 11..289 e-value: 1.2E-42 score: 145.9
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 12..191 score: 47.401997
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 17..289 e-value: 3.70628E-82 score: 245.571

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004027.1	MELO3C004027.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding